Sample 3300002403

3300002403: Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion

Overview

Basic Information
IMG/M Taxon OID	3300002403 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063444 \| Gp0055777 \| Ga0003588
Sample Name	Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	69089815
Sequencing Scaffolds	49
Novel Protein Genes	54
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	3
Not Available	32
All Organisms → Viruses → Predicted Viral	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Macrosiphini → Acyrthosiphon → Acyrthosiphon pisum	2
All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1
All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater → Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → epilimnion → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Lake Mendota, Madison, Wisconsin, USA
Coordinates	Lat. (^o)	43.098333	Long. (^o)	-89.405278	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001522	Metagenome / Metatranscriptome	678	N
F002353	Metagenome / Metatranscriptome	567	Y
F002931	Metagenome / Metatranscriptome	519	N
F004315	Metagenome / Metatranscriptome	444	Y
F005173	Metagenome / Metatranscriptome	409	Y
F006051	Metagenome / Metatranscriptome	382	Y
F006497	Metagenome / Metatranscriptome	371	Y
F007021	Metagenome / Metatranscriptome	359	N
F007507	Metagenome / Metatranscriptome	350	N
F011370	Metagenome / Metatranscriptome	291	Y
F013061	Metagenome / Metatranscriptome	274	N
F014585	Metagenome / Metatranscriptome	261	N
F014708	Metagenome / Metatranscriptome	260	Y
F015095	Metagenome / Metatranscriptome	257	Y
F016118	Metagenome / Metatranscriptome	249	Y
F018650	Metagenome / Metatranscriptome	234	N
F019089	Metagenome / Metatranscriptome	231	N
F019090	Metagenome / Metatranscriptome	231	N
F021066	Metagenome	220	Y
F022592	Metagenome / Metatranscriptome	213	N
F023531	Metagenome / Metatranscriptome	209	N
F025916	Metagenome	199	Y
F026480	Metagenome / Metatranscriptome	197	N
F027112	Metagenome / Metatranscriptome	195	N
F029049	Metagenome / Metatranscriptome	189	Y
F029339	Metagenome / Metatranscriptome	188	N
F029719	Metagenome / Metatranscriptome	187	Y
F030674	Metagenome / Metatranscriptome	184	N
F035196	Metagenome / Metatranscriptome	172	Y
F035561	Metagenome / Metatranscriptome	172	N
F041032	Metagenome / Metatranscriptome	160	N
F042870	Metagenome / Metatranscriptome	157	Y
F046199	Metagenome / Metatranscriptome	151	N
F047477	Metagenome / Metatranscriptome	149	N
F048094	Metagenome / Metatranscriptome	148	Y
F049443	Metagenome	146	Y
F052400	Metagenome / Metatranscriptome	142	N
F055724	Metagenome / Metatranscriptome	138	Y
F066777	Metagenome / Metatranscriptome	126	Y
F067401	Metagenome / Metatranscriptome	125	N
F073535	Metagenome / Metatranscriptome	120	N
F078203	Metagenome	116	Y
F078209	Metagenome / Metatranscriptome	116	N
F078712	Metagenome / Metatranscriptome	116	N
F081248	Metagenome	114	Y
F083751	Metagenome / Metatranscriptome	112	N
F086975	Metagenome / Metatranscriptome	110	Y
F089498	Metagenome / Metatranscriptome	109	Y
F098293	Metagenome / Metatranscriptome	104	N
F102592	Metagenome / Metatranscriptome	101	N
F102593	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
B570J29609_1001210	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	3319	Open in IMG/M
B570J29609_1001398	Not Available	3064	Open in IMG/M
B570J29609_1001657	All Organisms → Viruses → Predicted Viral	2822	Open in IMG/M
B570J29609_1003354	Not Available	1890	Open in IMG/M
B570J29609_1003716	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1769	Open in IMG/M
B570J29609_1004858	Not Available	1491	Open in IMG/M
B570J29609_1006414	Not Available	1244	Open in IMG/M
B570J29609_1006498	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	1235	Open in IMG/M
B570J29609_1008047	Not Available	1078	Open in IMG/M
B570J29609_1008064	Not Available	1077	Open in IMG/M
B570J29609_1008410	Not Available	1049	Open in IMG/M
B570J29609_1008905	Not Available	1014	Open in IMG/M
B570J29609_1008956	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
B570J29609_1008997	Not Available	1007	Open in IMG/M
B570J29609_1011865	Not Available	854	Open in IMG/M
B570J29609_1012018	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
B570J29609_1014694	Not Available	750	Open in IMG/M
B570J29609_1015061	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
B570J29609_1015107	Not Available	738	Open in IMG/M
B570J29609_1015116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	738	Open in IMG/M
B570J29609_1015599	Not Available	724	Open in IMG/M
B570J29609_1015686	All Organisms → cellular organisms → Eukaryota	722	Open in IMG/M
B570J29609_1016265	Not Available	707	Open in IMG/M
B570J29609_1016919	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Macrosiphini → Acyrthosiphon → Acyrthosiphon pisum	691	Open in IMG/M
B570J29609_1017010	Not Available	689	Open in IMG/M
B570J29609_1017701	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	674	Open in IMG/M
B570J29609_1018751	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → ananassae subgroup → ananassae species complex → Drosophila ananassae	653	Open in IMG/M
B570J29609_1018997	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	649	Open in IMG/M
B570J29609_1019164	Not Available	646	Open in IMG/M
B570J29609_1019838	Not Available	634	Open in IMG/M
B570J29609_1020301	Not Available	626	Open in IMG/M
B570J29609_1020425	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	624	Open in IMG/M
B570J29609_1021285	Not Available	610	Open in IMG/M
B570J29609_1022188	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	597	Open in IMG/M
B570J29609_1023071	Not Available	584	Open in IMG/M
B570J29609_1023292	Not Available	581	Open in IMG/M
B570J29609_1023742	Not Available	575	Open in IMG/M
B570J29609_1025497	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Macrosiphini → Acyrthosiphon → Acyrthosiphon pisum	552	Open in IMG/M
B570J29609_1025889	Not Available	548	Open in IMG/M
B570J29609_1026239	Not Available	544	Open in IMG/M
B570J29609_1026533	Not Available	541	Open in IMG/M
B570J29609_1027020	Not Available	535	Open in IMG/M
B570J29609_1028272	Not Available	523	Open in IMG/M
B570J29609_1028331	Not Available	523	Open in IMG/M
B570J29609_1028419	Not Available	522	Open in IMG/M
B570J29609_1029405	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	513	Open in IMG/M
B570J29609_1029522	Not Available	512	Open in IMG/M
B570J29609_1029862	Not Available	508	Open in IMG/M
B570J29609_1030834	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
B570J29609_1000799	B570J29609_10007993	F098293	LAKYQFKRGSPLQEYLQTKMREKYRIPTITFTLQNLISDLGAIINKEQLFDPLNPDIILCDSDLEVALNLKALRVTDLKHYILSQLVCIVPYQTSFKNPYYAIETRSDRNRRYFNKLEIQFKQMDQQMSQRVFKEAESYKLKPLLKRALKRMPSFPHHQRTFKFNEICMYLEKYFESYEDDLFDPRNVNLCMVHNDPLGKAFNVNAFHICQTTHLLQHNIIAV*
B570J29609_1001210	B570J29609_10012102	F002353	VFPVLVADVDVREDSIFIRLRKEEVVCEDQDTSERVSSSDVFEPVVEKVPEIGSEVTVPLETIPEDLVFESGEAFSLEGVDNIPMEELFCGSHSDGSLAGSSDITGISVDTVLDLNLAS*
B570J29609_1001210	B570J29609_10012103	F006051	VDAIRCHILEKYMSSYMRERNVDALLVLRNENKWAMTGKYLTFSFHNFIS*
B570J29609_1001398	B570J29609_10013984	F102592	MPDSPTPVLKIQYEGLSNTTSPHRNPAFITLTNKKAFTIPSCNYAIIHFPVLVRTSLPAVSILYNNDFLYKHGLTCVINQIPTNDTLLHIKVFNYKLIPLTFEKESLQFICHTVLAKYP*
B570J29609_1001657	B570J29609_10016577	F042870	MSEELPDSKIPWWDNEYEGIYSEDPDNGYPYDVGTKVQE*
B570J29609_1003354	B570J29609_10033543	F025916	MAEGTIEESQKNSPVSPMSTHLTRPMSGCRLRDCGAPDCPTCSGAEAARLYREQQACDHEEHEHGHCLACGADITDTLAGQAEDAADAAQDR*
B570J29609_1003716	B570J29609_10037161	F089498	MSLTSYNGYPASKDPAEIKIKSYPVRGTDRKLRCAESVGPLLAAFAAEFHELIEPIDEGTFDDWAY
B570J29609_1004858	B570J29609_10048582	F011370	MAEARGSGSQQGERELAAPPGSEWCGDKERSQGGEMGTLSGGDSASRRNYRGGNMSGLPDEPLRKGAVVCPYAPYCGLAHEAIRCARPNTLSREHRWAIDRDRKVCLRCREDGMGVDEICGQCRDDPARASVPNPPAAQWPKPSWIMVPEADTDRVFYECTTLSEVARYNPGPR
B570J29609_1006414	B570J29609_10064141	F022592	KMAENNAWERNSRRGNSQPRAAGARGATPVEPVRSAGREESAAPREARELYHSQSPWGLEANRDAERRPELLAEEKALVEELLKSAELRPLVSLVEARGLGLLRSAREGDELRTGANMSALLSAVASGKEEIQRIGRDRGWSAGITEEVLDRLQAMVREPIQMGSDVIMSSIPPKWREQATRRASEASRVIQKMTCDITTEDWSLERCQDYLVELEMATCGAMMALRLTDNDICSERVSQQVEHLSSKAREAKNMALELRQKHLDAKLQVKDRPARVPQEFAGGPTGPGPGRWRGYCGPHFSGRLEDLRVFRKSWEEYGRQYLPAEPEGVLMEVLHTQALGPKARRAVEQAHSLGTTWTYLEDHLREQRDRIDSHLSDTLRTGELIGPEDLYLYYRKVCQFLDMDEGERKVNDL
B570J29609_1006498	B570J29609_10064981	F026480	GAYRELEQRVGIARGLANKLRARHLEAYNRQGGPVAYADTSGIWKILMMARVRLDERLAACLPPGHTERSARLLLGSDEELGTPPPSPPRSRDTPEGAWPRFSGNFEDLAWFRQAWEAHVQQFHHEVAPEVLVGGMRKFCIPRGLSRMIEAARNPEEAWRMLKSYFDRETGMLDRSIEEILSHGRMVNDSQTXAHYSRILMAIRDAKQIGRLSDLLTDERIGALMERVPRKENGYWGCDLKGVRPKDRPVVFYSFVRFRALELGSNTAPFRFQLKDPEELEPAWEGPCLMGDLCGGSHVPEECDLFIGLSQRDRLAVVARKRLCYLCFRHADSRPCQLQSSLPSCSIGGCMRMHSRLLHQALQEEDTRILVVEIEVQLKKPEADEEFYAADFETLGQGDEVEKVSFEVKAP
B570J29609_1006989	B570J29609_10069892	F021066	MAHATLRFDLSDTDDAREHRYALAGRDALIALEAIDNRCRSALKHGEPSEETTTILEEIRSTIPYELLNLLH*
B570J29609_1008047	B570J29609_10080472	F005173	GIFVLNIYFCVSYVFVLILILSSFNIFLFCFSNSGWAVGPSGGIVEPDLVTRMRLDESADGHFSYGPSLGLFREPFINERYLFGDSQYHNCKPYLDMEKEFFSDNAAIVREVYFDTDILLGVDSDEDLGVEEAVNAEDLVPVLSAEEIQWQHAAANDILNMEIVRVTPVNSDSEDEETMERVASPVVVEAVSDVTDTNEATGSADNVVNNSPNLVIAEEGDYVEEAVEGRADVPSGPGPFSEDVTMDDFLPRPTRGSVVFLAFSDW*
B570J29609_1008064	B570J29609_10080641	F014708	MPEXAGVANFRVFFDELAAVVFQAPANLPVLYPVGSLEEVPYIGGVSPEAVREGLRLDVPDGIAPKFYSQFLNDSLFHENLSGSIAGCHPVNL*
B570J29609_1008410	B570J29609_10084102	F041032	MDPFAQQVQRIENNDKVKEIVEAXRLXPIADNDVKTQINASLEKILTPAAHKIPETQKKITEFEFTEPEFS
B570J29609_1008905	B570J29609_10089051	F019089	MDPFTQQIQRVENNDKVREIVTAFRLIPINDNAARDQLEETLTRILTPAAHKIPETQQKITDFSFTEPDLSYHDIAEKPKYRQMKHGIHYLDEDNTLYYNSAIEASEWEDENVVATAARDEATAAAEDDATIQRAYNAALARQQAINTKIFAQPPRWVLIKRRALNDTRMEDSLLQYIDKKHTQVDWYSTITTLHKTGTKIGYTLEHYQRVLHRFISYFKPEMNQLGQKMRLDELARLLMTSTMPVNDREMIINEIKKLTRRKNESLRVPMSNLYSLATTYYNNDPDMESQRNKLLFNGLQHFTTGITK
B570J29609_1008956	B570J29609_10089561	F066777	MGELTFIKDGLATTIHDNGDMTVVAAKQCDECFTWQTDLGGFNVRDVSGEVVLWLCALCRA*
B570J29609_1008997	B570J29609_10089971	F035561	MDLVTPNFRLAESVLETLSESQLECYICXHGPREFETQKLRDIVAANMQPDIYPKRKDVYLALAIYLYRAGHTRTVLNALQFEGFAPGPSPDRRMDESTDFGQPRWWSSYEWALGGRRPTFRGKTIWNWQRL*
B570J29609_1011865	B570J29609_10118651	F027112	PKFKNSAELRHPTVETEPTQVSQVSGHQAPAMGHDSQAFQAEINDKIHSKNRLDFESEDAVELNSYKFPKPRFYNPNRYQSERPMDTFELLSDIARQVGPKERPLTYQDFLEETLRKSIKPKKAKAAVLNSIETDPVYLKGINLSIDEQKMVALMDTGSTHNLLAYDVFITLKDKTFTPVNMDMKVAGSTLSNNIVGKAQLNTVFETTTGTVVLPLTYLVAHKLNGYHSIIGAQMLTNPRIIKATTPFHVHLNEDYKNAVIPLHSITKPPSFNSNQVNDVEDNP
B570J29609_1012018	B570J29609_10120182	F078203	VNPRVPYSEDEAQEAWLWVGRHGPSNSWTATNGTAAGMIGRLLEERERLLAMIAARENLPRPAEQ*
B570J29609_1014694	B570J29609_10146941	F019090	HCSADLYGLETMFRTSLVQHPCKNRETFVYICSDRYLRTPVLPDEGEKFSLDNFVTEKTMPFFAQGMGTVLCPICLYSSTSASEVMLPAFFGRKAFVQHYRELHWDHSIASGLSSPTQLGTRIYQAHLVYTLCIAHLCLSGAPEDNVNGHPFLSLAGVRFSTHLRKVLVAPTIPMEDQDSEEYCEVTALAEEMMRPSGSHHE*
B570J29609_1015061	B570J29609_10150612	F029049	LDRSQEITAHRVGLERTIVRNANPSDASNYGQVYKNWHELVWQEAESAAAEIAVANYFGDYGFTPAIDNAHDTADVGDNIEVKWTKHSNGHLILQNRGPGRPNDVAILVTGFSPVYVLLGWMPVHMAKQPRYKHPHQNNFWVPRSSLFEMQYLKRSNYGDV*
B570J29609_1015107	B570J29609_10151072	F067401	MALSPEDVRYLRHWEVSIRCLLRDPDLDFVRCLRIISERIVPQLVPAVNLEEHRRQTKFSACDEFACEIWAGYLGSMITRNDKELADIFKRVSEEVMLEQGYPNTMKLGLWVHPY
B570J29609_1015116	B570J29609_10151161	F015095	MERAQLIVGIALGSFTILGLGAGLIRHVVKAYLNELKPDNNGGHNLAGRVERIEQRXDRIYEILLEDRLAK*
B570J29609_1015487	B570J29609_10154871	F002931	EEPHPGCQPDLQEIEEDLTGTVPEEGASTPDGADGGYDEEPSPYEHPDEDRPRLCQQLIQLEIDGELTALHTLYDWETPNTLVRTEGARRIGLQGVRIPKQAIKGYQGVGTITDSVYHVPLVDADGNVQVIRAYGVEEITAVSRARLPPLAKEIFPIIRLAAPWMETEAGHVELLIGLDHRQWLPVHVEDCWNPDDDMRLMKSAFGHRYMITGGWGRDLLPPDNSPEDQAGAQGGEDEQVET
B570J29609_1015599	B570J29609_10155991	F102593	ESSVPAVTVGVLRAERPKDESQWRCRVPTCFQSCHALVDCPLFLRMPAEERGEIVALSDLCVGCLTPGHGTKAQACPFKDEPHGACAKPKCKGAHHQLLHVDGKQSRCPHQYLREQSRCPHQYLRGDAASKQRCAQIAAARAQADHQPPVQLMTQRIKAAAGKTCLALWDIGSQVTLATHKAAKEMGLEPILGEPLNLMGVGGSQKTKSTVRYKILLFDTGGRAVEVTAYGTDHIMAPLE
B570J29609_1015686	B570J29609_10156861	F018650	EIVMDEYFSLDELRYQVMSILRHAAQFPNNSDVIVLEDQELQMVFDSWYIFVPDVVENHLLSHVIPAPADISNDLQNKHMTEDFYVDSPVDLIYKDPSSVFWIPSFVDFAMNQSTGNVGSWNKLLFMFTEFCLNNTTYFTRFSDCIIGINENTCLTSLFDFKYFHISQIETLLQKITKFLGRKNSIFQSCHFITHNPAFDITSIHPNVFTFIDDIINNNNDMMPDFQTGLYI*
B570J29609_1016265	B570J29609_10162651	F004315	MKVVSDVLLLLCLHKFDLRVTAEAGQALACLYSGARLYKGPGQANLSQSAATRSTGNISVWIQKVDHSNTRGIVSSLFFSRSEITAAL
B570J29609_1016919	B570J29609_10169191	F102593	ESSVPAVTVGVLRAERPKDESQWRCRVPTCFQSCHALVDCPLFLRMPAEERGEIVALSDLCVGCLTPGHGTKAQACPFKDEPHGACAKPKCKGAHHQLLHVDGKQSRCPHQYLRGDAASKQRCAQIAAARAQADHQPPVQLMTQRIKAAAGKTCLALWDIGSQVTLATHKAAKEMGLEPILGEPLNLMGVGGSQKTKSTVRYKILLFDTGGRAVEVTAYGTDHIMAPLEA
B570J29609_1017010	B570J29609_10170101	F013061	EDESWESDGDLDDPFAFRPETTVDRQAYQPVSEEQVKSDLRYHLRTIYKLTSIEKNGGGKRYQCLMCLPKYKLIWASKTTYQHLEKHVVAXHPRQHKTYKELMAKKSGYKRKRSPSPNQSTSDSPKVDQSVSKRIKTPGGGGTPVLSFYSQQDYDEDAVIEVVMNMLPFEVCAML*
B570J29609_1017701	B570J29609_10177011	F007507	VTTLLASFNIQHQTSFPYMQRGNTVESQVRKFLNAARAAIADSPIAKHTEWHVLYPLIIVRLNTLVSKYGLSREYVHFQQVLETHLPLIIDIKLDQDIEDDLTQTSHKFRGAIQKFFKNKKKAKLSYPDKKSYDFALHELVMRKEYTPSTPLKPTYIGPYRIMELFPQGSLLKDPRTGEQMSVHFANMRKLSMDEFITLLPTHFDNDILKTLGLFRYNRKGNPE
B570J29609_1018751	B570J29609_10187511	F016118	EASGATSVASGEQEPEQEEPRQCPVFGCTRGHDPGDCPTFLDMTPKERLDMMHAKQLCLLCLRHPLSVGCEAASKGACCPWGECDRPHHAALHEVLKAGGPSWPXEGADPPKGSVVAVDGGIPGIAKLLGSLLESLGIDPNDLEVRIGIRQAGEPGRSHAEDARGPGETKADTAKMAGQLLEALTSLCQAGERLADSAIGGGPRARRGRPTGAGMLR
B570J29609_1018997	B570J29609_10189972	F086975	MLSPRLTNCPECASIPVLIADIDCKLASLANNLYNNVVFMLNQPVPGGVMLDLINYRRILAYKYCNPDYAAPFTVNMIASRVK
B570J29609_1019164	B570J29609_10191641	F023531	FLQLLNQPINPPHIQTISRRKRHWLSQAFSDLTGLATQTDLNILNANEDKMRLEEEKTQKELKTIETKTQNIIQIIDEQAVKMAKLYSDEAEVKQAIKIVLKEEQDVIMQIAQLTASMEIQSDIAIEYAAFSNALNLIPHMLHEIEESLLAVTNQAIYPSLLPSESILKTIPFYSKQSILSATISAKLSSRMNTIEISIPEFINPFQVHFVKTIP
B570J29609_1019838	B570J29609_10198381	F029339	KTPEERLAAVRRRELCVLCFRHLDTKRCWSLGKLNNCNVRGCGRGHNYLLHDVLQNEEAMMVSAVPGQTGRQESSLRCRQMVAAENEGQCFRLNVLYDWGASVSMISEEAVEVMGLISTKQAKRIIKGLGGATTVSKGTCTLGLVARNGDRKTVTAWEVGEIASLPGGEPPEDVDEQFPGLRYLSEPNCLIQKAGPVHLLIGMDHAHLMPE
B570J29609_1020301	B570J29609_10203011	F083751	MFSLKGGEWLFXSLFLILHKISPLENALTEMPLRKFVYLYKDLSSTYTVISRIGKFFVS*
B570J29609_1020389	B570J29609_10203892	F073535	YYTFDVETYEDRVEQVHVTYEGQVEGYFNEDQLNRSFYELGQGEVFDFYDFRETDRDYGDGEGNGIELRSITMVSDVIPESNKKRKVMKESKLDSFIDSLNESETKFLIEKLQKKLF*
B570J29609_1020425	B570J29609_10204251	F029719	MAKLKKILQSAPRLRNTLPQNVTRGNGVKNPQKAEAYVGKRVLRNGGDTITSIKGAISPVPNGPLIKKKGPYAGSTLKGGGKVKVMAGGEKHVVYKSAKNSSKATKGDIMVNHPTKDKGKWDTINLTKIGRAKTVKQGVASTRKWHKDN
B570J29609_1021285	B570J29609_10212851	F081248	VADFIPLMGYQPDRKGTDDFLASLARPTLAQAGPDLVLDERKDVNLGQYLLKVAPDWKRGAQKIGSCVGWGWALSCDILAACDILLRNERESYGGRVLEASIYAFSRVEIRGGRNLGGDGSYGGAAAKAVTNYGTLHYGVNYDGVAFTDNSGQREKEWGRDGVPDRFE
B570J29609_1022188	B570J29609_10221882	F049443	KVNPLAAVKPVVVVRLNVVPVGGLTKLIDANKVAVEPNPLNTNPLASCPDVDGKNDLESGADTLCPNPKNEISKKHITNSFFILLNG*
B570J29609_1023071	B570J29609_10230711	F014585	HYQRVLHRFISYFKPEMNQLGQKMGLDELARLLMTSTMPVNDREMVIHEIKKLTRRKTESLRVPMSNLYSLATTYYNDDPDAESQRNKLLFNGLQHFTTGVTKEKLTRLIKYSQLQKIKLDYHDTLETCILSEKTNGEPAEDLQFGQSKETILVFQANITPVDSLLDNDITPIEFTLANPSKKKDGKYEDSTKP
B570J29609_1023292	B570J29609_10232921	F006497	MVGAWVVELATWSKGTAPKIKNLRERFAWRPSIPMSRTARQPQAMDLVIGRDNQKVFPEFVQEAKYKKDDLVLCDIPFSPGQVVHGHALKCIDWVKKLEVSEDALKPQFKIPIKGKRRTKXVARPVVARLLSRESTGSSACQSPXQNLLDEVSDLGEAEGGSVPRGETPWHHFLEAGFPEGGLQRESSMEGES
B570J29609_1023742	B570J29609_10237421	F030674	VPIPSKPGEPREEPKRSLSGIERNDRRGKGELWPSLDEQRRRAEEEYHRLGGLSHGCRQSWDLKMREEKGPGRKINGLFCWTAKDSLILHEVAKAAGLEGRGYGKKVDSLYVRDMESTCAYCVPLVDWKGEVQYLWARGVDYIARLAGKEDPRKWYAQFSELAMARDTEAERKAPIEMMIALDNWKWMPVR
B570J29609_1025497	B570J29609_10254971	F078209	DEQCLLASAFHPKFRQLGWLRQEKREGLKKKMQDLVAAKLKKKVEEADLTLPVDNDSADAGTSAETEVTGVVXNRTDDLFAHMDDILDEPTHRGRRNLIDVNAEEIVNTWMATKRSDELKDEDFQLKPVLMELFRQYNTPVPSSAGVERLFSQAGDILRPKRISLGDDRFHQLMFMRGNRHHWE
B570J29609_1025889	B570J29609_10258891	F048094	PQPFGMPGWLQPLGQADPVQRLALMMALMVLGMPPVHGCYAPTRCGVSSSADMSEPRICPPIESETRIGLSVPRVEMDEEQWTRLPAIRCTAGQSVLTLTCGLGGRTQRARYEKFREPCGIQPTACWKALESGKLKVGEMEYPVKVNQTRSHMANEEFCDKGCNEPVTALERRMVQVLMEVL
B570J29609_1026239	B570J29609_10262391	F004315	MKVVSDVLLLLCLHKFDLRVTAEAGQASACLYSGARLYKGPGQANLPQSAATRSTGNISVRIQKVDHSNTRGIVSSLFFSRSEITAALSLHFQHLMKTKG*
B570J29609_1026533	B570J29609_10265331	F035196	FNNFPFISCFSNSGWAVGPSGGIVEPDLVTRMRLDESADGHLSYGPSLSLFREPFANERYLFGDSQYHNCRPYLDMEKEFFSNNAAIVREVYFDTDILLGADSDEDVGVEEAVNAEDLVPVLSAEEIEWQHAAANDIMNMVIVRVTPVNSDSEDEETMERVASPVVVEAVGDLADVNADS
B570J29609_1027020	B570J29609_10270201	F007021	EAIQGMTNAMNAIANQVIRSSGRSGRNAGWPYFDGTFRDYPGFKRKFESFRTTYHRGTPTRELFQQFREMCLPEKLSIRIKSANTMENAWTRLDAWFGDKNLFIKDLMQDIRSVSPIKDGDDERLMDYYVTLQAHIEEAHSAGALGMLLIPANVELMVLPLPTWEKRTWREAQGKLAA
B570J29609_1028272	B570J29609_10282723	F055724	MKTADGNDKLGKGCIVVSRPVGDTCPPDCDYLGNGCYAEATENQY
B570J29609_1028331	B570J29609_10283311	F078712	YILVIEDLLEQVESEIILQSNQNSVITYELTGEYTQYDKSYPVTVYESITVSGVQDVRGDIVVEDNLDITRPYVDPATLGTTPTEITEYTEHEKLARAIIDSVTGGFYYKRSYLEIVGQGTDYVPLWDKTHKILTVHENAELVYDSSEDPKAIGVYNYLITKDKSAITKDPIEL
B570J29609_1028419	B570J29609_10284191	F046199	EWLLRPFLYYNREKFFQTYEISKEFDFNYITPYNFKRPIFFRRSAPPPSNKTAYLSIFCPVSYKEIQLSYKNKYEQTTTVKYGWTMFSICSYDYLDLSQWSICTTQKPNEITLVSCNKPNFTMYILNDNRVPMSLLNLGLSSLYQNKLNSALNLTKYVVPKTLSQQAPPCYLFH
B570J29609_1029405	B570J29609_10294051	F052400	ETYVEISRPEASDLPSEIAVCHFLDGAKTVIDWALSLPKLKLLAQERVYTARMAQQALHRLVSRFTPEHSHLVSDMTANEMANYLLRTETNRDKTAYRRKELHELVRKPDMELRAPLTTARRLIDIVYPANRAGTEIQRSTAWRTAIISFLPDEIAIPMSERLKVANEIC
B570J29609_1029522	B570J29609_10295221	F047477	CLPEKLSIRIKSANTMENAWTRLDAWFGDKNLFIKDLMQDIRSVSPIKDGDDERLMDYYVTLQAHIEEAHSAGALGMLLIPANVELMVLPLTTWEKRLWREAQGKLAAEDRSWYMSRFVNERLTYAINMVATSERHVLPKAIPYHRSQRSPSSEGRGGRYSRPGSLGRNV
B570J29609_1029862	B570J29609_10298621	F001522	YLKEPDSNTKSVHPHLPLQEHRKPLANMSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITLXTEDIPRRPITMPPVFAELSEIETYTEMARLDLQYDDLRTDKPRTASLARLCKALCIGRYIALGNQPALQFKSWALVCPMNFETPDMPH
B570J29609_1030834	B570J29609_10308341	F047477	EMCLPEKLSIRIKSANTMENAWTRLDAWFGDKNLFIKDLMQDIRNVSPIKDGDDERLMDYYVTLQAHIEEAHSAGALGMLLIPANVELMVLPLTTWEKRLWREAQGKLAAEDRSWYMSRFVNERLKYTINMVATSERHVLPKAIPYYRSQRSPSSEGRGGRYSRPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002403: Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences