Sample 3300002302

3300002302: Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion

Overview

Basic Information
IMG/M Taxon OID	3300002302 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063444 \| Gp0055752 \| Ga0003627
Sample Name	Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	33686835
Sequencing Scaffolds	47
Novel Protein Genes	56
Associated Families	42

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	36
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae	1
All Organisms → cellular organisms → Eukaryota	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella → unclassified Kiloniella → Kiloniella sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Paucidesulfovibrio → Paucidesulfovibrio longus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater → Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → epilimnion → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Lake Mendota, Madison, Wisconsin, USA
Coordinates	Lat. (^o)	43.098333	Long. (^o)	-89.405278	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001808	Metagenome / Metatranscriptome	631	Y
F004451	Metagenome / Metatranscriptome	437	N
F006498	Metagenome / Metatranscriptome	371	Y
F009053	Metagenome	323	N
F009146	Metagenome / Metatranscriptome	322	Y
F011062	Metagenome / Metatranscriptome	295	N
F015420	Metagenome / Metatranscriptome	255	Y
F015961	Metagenome	250	Y
F017797	Metagenome / Metatranscriptome	238	N
F019601	Metagenome	228	Y
F020006	Metagenome / Metatranscriptome	226	Y
F020319	Metagenome / Metatranscriptome	224	N
F025216	Metagenome / Metatranscriptome	202	N
F033356	Metagenome / Metatranscriptome	177	Y
F033699	Metagenome / Metatranscriptome	176	Y
F034069	Metagenome	175	Y
F035188	Metagenome	172	Y
F035568	Metagenome / Metatranscriptome	172	N
F035754	Metagenome / Metatranscriptome	171	N
F038543	Metagenome / Metatranscriptome	165	Y
F040486	Metagenome / Metatranscriptome	161	Y
F041598	Metagenome	159	Y
F043238	Metagenome / Metatranscriptome	156	Y
F046189	Metagenome	151	N
F049424	Metagenome / Metatranscriptome	146	Y
F051702	Metagenome / Metatranscriptome	143	N
F054582	Metagenome	139	N
F056332	Metagenome	137	N
F058709	Metagenome / Metatranscriptome	134	N
F061544	Metagenome / Metatranscriptome	131	N
F075697	Metagenome / Metatranscriptome	118	N
F077025	Metagenome	117	N
F079613	Metagenome	115	Y
F079618	Metagenome / Metatranscriptome	115	N
F080036	Metagenome / Metatranscriptome	115	Y
F080897	Metagenome / Metatranscriptome	114	Y
F086628	Metagenome / Metatranscriptome	110	Y
F086808	Metagenome / Metatranscriptome	110	N
F094597	Metagenome	106	N
F096661	Metagenome / Metatranscriptome	104	N
F098804	Metagenome / Metatranscriptome	103	N
F104317	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
B570J29635_1000181	Not Available	4611	Open in IMG/M
B570J29635_1000412	Not Available	3207	Open in IMG/M
B570J29635_1001021	Not Available	2045	Open in IMG/M
B570J29635_1001035	Not Available	2031	Open in IMG/M
B570J29635_1001052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2020	Open in IMG/M
B570J29635_1001088	Not Available	1990	Open in IMG/M
B570J29635_1001264	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae	1836	Open in IMG/M
B570J29635_1002010	Not Available	1424	Open in IMG/M
B570J29635_1002038	Not Available	1408	Open in IMG/M
B570J29635_1002188	Not Available	1363	Open in IMG/M
B570J29635_1002493	Not Available	1266	Open in IMG/M
B570J29635_1002528	Not Available	1255	Open in IMG/M
B570J29635_1002755	Not Available	1190	Open in IMG/M
B570J29635_1002863	Not Available	1163	Open in IMG/M
B570J29635_1003030	Not Available	1133	Open in IMG/M
B570J29635_1003368	Not Available	1072	Open in IMG/M
B570J29635_1003688	All Organisms → cellular organisms → Eukaryota	1019	Open in IMG/M
B570J29635_1005081	Not Available	865	Open in IMG/M
B570J29635_1005104	Not Available	863	Open in IMG/M
B570J29635_1005324	All Organisms → cellular organisms → Eukaryota	845	Open in IMG/M
B570J29635_1005392	Not Available	840	Open in IMG/M
B570J29635_1005550	Not Available	827	Open in IMG/M
B570J29635_1007272	Not Available	729	Open in IMG/M
B570J29635_1007304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	727	Open in IMG/M
B570J29635_1008710	Not Available	668	Open in IMG/M
B570J29635_1008861	Not Available	662	Open in IMG/M
B570J29635_1009331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella → unclassified Kiloniella → Kiloniella sp.	646	Open in IMG/M
B570J29635_1009517	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
B570J29635_1009808	Not Available	629	Open in IMG/M
B570J29635_1009936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	626	Open in IMG/M
B570J29635_1010547	Not Available	607	Open in IMG/M
B570J29635_1010847	Not Available	599	Open in IMG/M
B570J29635_1011062	Not Available	593	Open in IMG/M
B570J29635_1011186	Not Available	590	Open in IMG/M
B570J29635_1011416	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	585	Open in IMG/M
B570J29635_1011481	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	583	Open in IMG/M
B570J29635_1011806	Not Available	575	Open in IMG/M
B570J29635_1012026	Not Available	570	Open in IMG/M
B570J29635_1012602	Not Available	557	Open in IMG/M
B570J29635_1013023	Not Available	549	Open in IMG/M
B570J29635_1013312	Not Available	543	Open in IMG/M
B570J29635_1013383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Paucidesulfovibrio → Paucidesulfovibrio longus	541	Open in IMG/M
B570J29635_1014198	Not Available	526	Open in IMG/M
B570J29635_1015103	Not Available	511	Open in IMG/M
B570J29635_1015181	Not Available	510	Open in IMG/M
B570J29635_1015565	Not Available	504	Open in IMG/M
B570J29635_1015624	Not Available	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
B570J29635_1000181	B570J29635_10001815	F009053	MMNTDITTKSAYKLLQQLESDPQLQSIEDTSILKDEQYPVSFEPSIVNLRDNIPLTSAVMILRWNEATDSSNLTKDQLQRMKTQRQKTIRNLSLNSTVDNPWDKIKFNFWKDRVTNICLGAAQAAFQAHDDTSTFKFLFTASDRSNTVVQRADQRNVQGMLLFHPILLKAPWEISSTIDADIDSLIQEKHPLVHAKANSMGPWLPYELQLQQ
B570J29635_1000252	B570J29635_10002523	F075697	MESEPVLMEIHLSEARLTNGITNDGDIIPAGSRTICHAESSIITTGGETLQNIHTKLDTCGSVSIAHSSYLTQVKRAKEHGLPQIRLTGIGGKSDILNMVGIVQLRTPEGRVKRIQCYVFDSPLGPTQKILLLSLQSVIEASINIIHHMDLSVKGKRGPLRFWPDNKSLEQICRDIASIDLKPTLHRRSRHQERETLDFAEIEECSEWEQISEEQDLVNLAIQYVETADLVVEEVYMTEIQLRRIVDRTTKEQQSQQSDGDETMTKNGETISKFSKEAMNIG
B570J29635_1000412	B570J29635_10004121	F033699	VLKLNSTMAKEISETFSGKPKDQTFESFDEKVLTWCRKQFGDGYAKGLWHNRLTDIGDLDLSDEEGDNFIFEMHCASVYEVLALKSPKEADHLYQSDRFWTKKWQLEHRQRCWERVFCHLEELVSGEAARQLRRLGVKKMKGMRDFMFRRFGAGQPEVLQERVRLYLLGMPDSHRVAFPPRVNIQNKLDTLEEREYLLEMCPAELRDTYDDGKEETLIRLLLRQGKERWQR*
B570J29635_1001021	B570J29635_10010211	F025216	MSNDYSALIRNAKDIPVLHTGIENSITSENTFPTNEHPSLITHTGKTVNTPLNSTLSARFIKVPNNPKDPHYADRNTLASIKKNALT
B570J29635_1001035	B570J29635_10010352	F046189	MSNSQQISDLLKVAKDIPILHTGLNDTAIEYSTYPVKEHAQLLTSAGKPISTPLNSLLTMRNIKIPTDRNDPNYKDRSLLETYKKNALSLTFRGTRTAPVSRVEWEEYYLHLVPLVIEHVKILLTTSKNLTTTMRKLYKASSRLR*
B570J29635_1001052	B570J29635_10010525	F015420	MKKIINYFTPVGEEQKAFAKALMLVVTAMISIVFLFPLLNLLS*
B570J29635_1001088	B570J29635_10010882	F046189	MSNSQQISDLLKVAKDIPILHTGLNDTAIEYSTYPVKEHAQLLTSAGKPISTPLNSLLTMRNIKIPTDRNDPNYKDRSLLETYKKNALSLTFRGTRTAPVSRVEWEEYYLHLVPLVIEHVKILLTTSKNLTTTMRKLYKASSD
B570J29635_1001264	B570J29635_10012643	F009146	MSLAAKQLFYEISCELNKHISQAFILSTKTEKGNTQISERIIIQKIGTILDSMGLTYVEAGSQQSKDFRNVGNIDLNIEVKKTDNTTIYFNDTCPGKDIYYVILFTGKKYKRTPEKNISPQLIFINGEEFIKDSPWIEDYISEITALKDKYARGANKKLLEGIMEVYPRPTFKANICRFISS*
B570J29635_1002010	B570J29635_10020101	F019601	MNEVAPPIASTLIYSLRKTAYLNIQTGEGLPTWISDAVKRAICRSITNALATNILHWTPPVLVATQLKINLGTVHDVHTVYLRAMPRYQGIVAHDCIKVLLDEDNDEGATIKRVYFGKCMLFLQDSEGKQFVVIQWFHRHEKNGFDQVSKVPSFKLAPEATTNSYSTLPLTAIINGALMVPGG
B570J29635_1002038	B570J29635_10020381	F020006	MPKTKLSXAERNQQLEETKQRLRLQQEARTIKRIEELDIEACXRLGRQXQFEYKELNSELECSETDTARQYTLYLSDVEEDLNHSSTVETVSVNKSSLLLETPD*
B570J29635_1002188	B570J29635_10021883	F033356	MTNQFTSNSSLNPLQEDILPQEDQRPKTHLQLQYITQTNRLPFTEAHQEQYSANVTINPFKLLELHNKLIVIEGQLSHLTDKVAAIVVEIHKMTHQN*
B570J29635_1002493	B570J29635_10024931	F054582	MQVAVRQPRKGNLVALWIHEFFAVHTNKVKSKGKLQLDIYQAMEFSLGGDMPVQCRIGLSEKQLSEIWVKGRYFAPAARIRRANPELRKDRFIFQKDTALDWEPAVQYKAELGKCPELVMVSNCHMWHPMCDVLPMLPRVVHPVDVQTHRVYVNGREWHYVCGVMATELSSLSDTKRTSSVTENTVGGFALSMIKRKHFCMYPEERLGGLIKSPSSQWGNVDELFQGIRNVMSSGTGFVSGSFCVPWTHACQFFWEVSISHAATLLRIL*
B570J29635_1002528	B570J29635_10025281	F058709	MSGAQGVSGERLSSLLGHVTHRGFDDLVDPKNQGIAYPTGNPDLLITGDPLFYTNLLATLDMFRLNSASLTFSTTDEGNQFRRRQKLTRTKFSFKCTRENPMPKHRWESYLRQVKAMVVDHFVRSIRHQSKNLPKHYETLFTGSEVPAGPTELSQVQRDKRKLGTMCHALIAEHMFTPNLDAQTGDDAIIDTFTQEDSVRATRSNSRGDRLLLDRKKAEWRRHLATVRSTFSEIFLWFIREVSTIEIQQDFEQVFRSHILQNQAAQGGQVDPFNGDILIAHIESNYVSDNSDSITAMERKFETMVRWRSETI
B570J29635_1002629	B570J29635_10026292	F075697	TLQNIHTKLDTCGSVSIAHSSYLTQVKRAKEHGLPQIRLTGIGGKSDTLNMVGIVQLRTPEGRVKRIQCYVFDSPLGPTQKILLLSLQSVIEASINIIHHMDLSVKGKRGPLRFWPDNKSLEQICRDIASIDLKPTLHRRSRHQERETLDFAEIEECSEWEQISEEQDLVNLAIQYVETADLVVEEVYMTEIQLRRIVDRTTKEQQSQQSDGDETMTKNGTAVPAIGWR*
B570J29635_1002755	B570J29635_10027552	F001808	MMRYLAIILLLSSCSAQYHLNKAIKKGYKCEETGDTIRITTLDSIPVIIHDSIVWEKFITTKDTIIKYNTVYVPKTRLDKKIEYRLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFARDKYLF*
B570J29635_1002863	B570J29635_10028631	F051702	MPRKIISHPFQFELLRTQKDKARIERELKLRQRIYTFAELSDKERKRRFAFLIAEKQRAAQQPPSSDDSESDSDSDLDFETLNETALPNPRENLTKPFDSRELTLGLIIGILIGLCFGLVFPNQYTYLTTLIQRPLYR*
B570J29635_1003030	B570J29635_10030301	F009053	MMNMDITSKSAYKLLHQLESDPQLQSVEDTTILNDEQYPIAFESAITNLRDMIPLISAVTILRWDVNTDSANLTKDQIQRMRVQRQKTVRNLCLNPTVDNPWDRIKYNFWKDRVTNICLGAAQAAFQMHEDSTNLKFLFSASDRSNTAVQRGDQRNVQGLILFHPILLQAPWEESSTLDVDIHNLIQEKAPLILARAMTKFTGSQLSAHELQLQQTAQQSLDSMKSSLKLLLARVQKFTSHTFHVFLRDLIPGARKGRSLLFTRIVEHRNQFLANNRSAVVPKVYSAQN
B570J29635_1003368	B570J29635_10033682	F015961	MPSNKNVELGGRDGFKYFKHGVSSYMLPKVRRINGGWWISIARQLQIFFCVTQIISDTTRTKFCVALSLLFEVHDGVRNPVDKDDLGLYQGKINYLLTTLVDIALPWSKSQCQSIKYHWPRHWGHTRQVYTYHLSFNV*
B570J29635_1003688	B570J29635_10036881	F061544	DKGLSFEKLDEKMQSWGRKKFGDKYARDLWRNELLDLKTLKPSEDKLHQFAFDMHCAEVYDMLCEENARHAEGLFYSDRFWTVEWQVECRQRQREKLFCHLETLVSEEAARQVQKQGVRRMAEMRSFLFQRFGAGQPEVLEKRVKHYLEGMPDEKTGMVFPPRCNMEDKLNELEKEREFLLDMCPADKRENYDDGKETTLTRMIIRKLPKEYDVAVKAVRDLHRFRTYGKLGEMEKITNFEDNTRRNYETEWLPRYSELRFELIAEYNLMKRRIDEERLTNRKTPGHPTLALQGFEQPGPRPITCYGCGQPGHRKGDPSCNAGPNDVWSGAPAAWKEAK
B570J29635_1004299	B570J29635_10042991	F056332	MVRDNDETMVEKDLFSGKEKGLSFEKLDEKMQSWGRKKFGDKYARDLWRNELLDLKTLKPQDDKLHQFAFDMHCAEVYDMLCEENARHAEGLFYSDRFWTVEWQVECR
B570J29635_1005081	B570J29635_10050811	F019601	KEIDGPVITGVTEPIEPTLIYSKKRSVYLNINTWEGLPTWISQDANRAIFRSITNAIATNILQWTTPVLVATQLKMSIVTLLEEQTVILRAMPRFQGIVAQDCVKVWIDEENNEGSARKSVYFGKCMVFLQDSEGKQFVVIQWFTRHEKNGRDKITKVPSFKLAPEKNTKSYSTLPLAAILNGALMVPGRGRFWALLAPKEQKVYDSLVVTIDASLNT*
B570J29635_1005104	B570J29635_10051041	F019601	SVYLNINTWEGLPTWISQDAKRAIFRSITNDIATNILQWTTPVLVATQLKMCLNKGLTEEETVILRAMPRFQGIVAQDCVKVWIDEENNEGSARKSVYFGKCMVFLQDSEGKQGSARKSVYFGKCMVFLQDSEGKQFVVIQWFTRHEKNGRDKITKVPSFKLAPEKNTKSYSTLPLAAILNGALMVPGRGRFWALLAPKEQKVYDSLVVTIDASLNT*
B570J29635_1005324	B570J29635_10053241	F061544	RRETCSLVFLQYPTVQMVRDNDETTVEKDLFSGKEKGLSFEKLDEKMQSWGRKKFGDKYARDLWRNELLDLKTLKPQDDKLHQFAFDMHCAEVYDMLCEENARHAEGLFYSDRFWTVEWQVECRQRQREKLFCXLETLVSEEAARQVQKQGVRRMAEMRSFLFQRFGAGQPEVLEKRVKHYLEGMPDEKTGMVFPPRCNMEDKLNELEKEREFLLDMCPADKRDNYDDGKETTLTRMIIRKLPKEYDVAVKAVRDLHRFRTYGKLGEMEKITNFEDNTRRN
B570J29635_1005392	B570J29635_10053921	F011062	PNLNAHTGDDAIIDTFTQEHSVRATRSNSRGDRLLLDRKKAEWKRHLATVRSTLSEIFLWFIREVSTTEIQQDFEQVFRSXILQNQAAGGGLANPFNGDILIAHIESNYVTDNSDSITAMERKFETMVRWRSETIVQWIDRFEAPLAELDVARDGLAPYTEQELTYLWKQTFSDNISGEEIQILTTHMPRYVEANSLQDVQDYLDGTFDTQLFRSLCVDIARFLPNRYVPDKRTMQANRDRFERKQLLQVFGEPDYDSPLLSASKTEQKRKPSPSVPKD
B570J29635_1005550	B570J29635_10055501	F020006	MPKKRLSLAERYNLLEXTKQRLRLEQEARTIARIEQLEIEACERLGRQLQLQHLELSGELECSDTDTARQYTLYLSDSEDDLTSEQNNSSTVETVNFVKSGSLLETPD*
B570J29635_1006688	B570J29635_10066881	F017797	NGEVPREGELVVIKDSSTEGWFLSEVLRVLPNLVEVRYFTTPTPALENYEHCSVQKRSERLSEICFRRTWHVRFGKHVGRATYKPPYPNNEDLQVWXGVINTSDLDSMLLLRNVRIDAEGKLDEASLRLAAQLPISHEKLDTIEDEEEGLSLTRQTPNLFTSSREILCSCVECSSLLSRDYIVAQRTLTEHPTATSQSSND*
B570J29635_1007272	B570J29635_10072721	F020319	RTAEVTMSGVQSVSAERLNSLLGHVTHKGYDDLVDPKNQGIAYPTGNPDILITGDPLFYTNLLATLDMFRLNSASLTFSTTDEGNQFRRRQKLTRAKFSFKCTRENPMPSHRWESYLRQVKAMIVDHFVRSVRHQSKSLPEHYEMLFTGSEVPTGPTELSQVQRDKRKLGTMCHALIAEHMFTPNLDAYTGDDAIIDTFTQEDSVRATRSNSRDDKLLLDRKKAEWKQHLATVRSTLSEIFLW
B570J29635_1007304	B570J29635_10073041	F079618	KRLKKNSGNKSTSFSASELLAVQALCHQLGSQNALLVQIAWLQITNFAQYSGDEFRRAPMLRI*
B570J29635_1008710	B570J29635_10087101	F020006	MTKTKLSLAERKQLLEETKQKLRLLQEARTIKRIEELDIEACERLGRQLQFEYKELNSELECSETDTARQYTLYLSDVEEDLNHSSTVEIVSVNKSSSLLETPD*
B570J29635_1008861	B570J29635_10088611	F033699	TMAKETTETFSGKSKDQSFDVFDEKVLTWCRKQFGDNYAKALWHNKLIDVDTLDLDVEEDNFTFEMHISTVYEVVALKSPKEADHLYQSARFWTIKWQLEFRQRCWERIFCHLEEVCSGEAARQLRXLGVKKMKSMRDFMFRRFGAGQPEVLQERVRLYLLGMPDNNGAAFPSRVNIETKLDTLEEEREYLLDMCPAELRLTYEDGKEETLIRILLRHLP
B570J29635_1009331	B570J29635_10093311	F034069	QATREATTAEGGRDGDALEDVDAFFDQSIIKEQLELAVRMAEVVRATSEWHRRMTAENLSQSGQPVDLAKYVIGHKAYFYKPPSMNETISRGRKAKHIDHYVGPGTIVRHIGTRSIVIKYHEKEFQRDAGMVMLEKPGFADADPTIENRLIIGPQLQDGALRADNSLQDETLRAGNPLQEGEFVILKDDPNATTWYCAEVRKILADRIEVNYYTT
B570J29635_1009517	B570J29635_10095171	F086808	GASLVQLVLLPSCASLVLLSLLRPRTSPIGMVRIRHPNLFVDKRDIFWPKMPTFCEK*
B570J29635_1009808	B570J29635_10098081	F035188	MTAKQMRLLLQSISADPQMKRSKDSILLAEDQYPESLDAIFTRLTVPTTLQNAITLLQWQRNACDSSYDSVLKSTSITNQDYLRQTYQLIPTSDNPWDNNTFRKWKYFVTNLCLSAVQEALKATDYKSMKYLFRPDKEDETKTELYNSKXNVQGLLLYHPILIDSPWQEPADIDVKIGRLLQTTE
B570J29635_1009936	B570J29635_10099361	F035568	DDMQYQNNMAVIETYRGRITDRIKLIVFQCYFDKGYSTARAMAEYFRIPVTSAHYWIQEIKTDLKNLRDEN*
B570J29635_1010547	B570J29635_10105472	F040486	LQLKILELEKLKILELEKQKKLIDYNFNVINSILTEKKTSINNNKYSKSIPLARYYDQQLVIQLEAIYYILQNVDERLKKLETYLQK*
B570J29635_1010847	B570J29635_10108471	F086628	PAIIDYKNATLKDREKSIKLATFLRTWCLDNGTGLPTTTPPSTNHGKLHHLWWGRIPMEDVDKHILVRALGLSALGKFDKITIKMAAQLDNPHHEGAGGVDDFVDKETFQKHVKRVSNRNKRKR*
B570J29635_1011062	B570J29635_10110621	F035754	FFLTSMTTLVSEKIDILRHSQASLEGKPLALKRSIQVSDGLRSYFSKITDLMQRNLLSWYEDDLVIAKDMVDNATELENDQGRSGLCSCACSPTVTSFMALNEYESLLSSLSIQEEALKAPLAHDMSRDSVEASASARIQ*
B570J29635_1011163	B570J29635_10111632	F035754	MTTSVLEKIDILHPAQASLEGKPLALKRSIQASDGLRSYFSKTTDLMHRNLVSWYEDDLVIDKDMVDNATKLENDQGRSGLCSCACSPTVTNFMALNEYESXXSXT*
B570J29635_1011186	B570J29635_10111861	F077025	LFEDLCKGSAATAQNPNATGFAFGGMSSSSAEPSSTSKNYTPKEKADRLQEMKDEEANVEKEFPNELFDICGAEPVEEVRLIDIPFQKGKTHDEEEHIFNCVKVNELRKKRATIYATITRGEKALMKMVKSTDAGDWEIFHNKMRRSFETLTQIMDHLQMIGFEKTKGEDTKYLGYASRLKKMIAKIDHIRDTQAA
B570J29635_1011248	B570J29635_10112482	F041598	MAELINAKQMRQLLQSISTDPQLKQSKDSILLAEDQYPESLDTIFTRLTTPTTLQNTISLLKWNRKSGGTNYDAELKAITIKNQDYMRTTYQFTPTAESPWDT
B570J29635_1011294	B570J29635_10112941	F049424	VNIHLDTCGSRNLASEHLLHNIKKAEEYGHNQIXMVTVNGNSPSYNRMGELHFVDEDKNPIITLCYVQAQPIKGMDNFVLISNSTLVAIQTDLNYHSSMCEHVGIVPLRRLASQPYHYNDKTKHFWLNDSDTIMHTKQSDQVTAVEDGNSAMLAAEETAPDKEGGDTPDTSQCACQPRLAEQLHEVDFLKITGRRL
B570J29635_1011416	B570J29635_10114162	F043238	MKYQTISQLLRELKSVDISESILKDIETIEKVTLRMAYHDALIRVPFEEWYEATFQK*
B570J29635_1011481	B570J29635_10114811	F080036	VPYGLISRCRRRSRCRPPRLDGTFFLSSFSRKHTRWKRGRLRAHKFFSSARLSKFGQGLRSVRRPYVGISTPTLEGFCDGHKDFLQLYRLLSTFSTVDHVKNAQSCVNRVNAHRGTYGGTYEKRACFSPGLLDPKSLILIWDTGASYGLTPFRSDFIDYVKCEIPVRDVTKVNTVVGIGTTLHKFTDINGNPAY
B570J29635_1011806	B570J29635_10118062	F004451	MRPILDNYIAAHYKEIRKYTNYFLVRMKSTISADAVINNSFLYLCNIDIEVTDPGKVKAYLLNTIKMQILWSTSLTNRQERVTATDSTMPIVMDDDTDLYDKIRDDMQYQNNMAVIETYRGRITDRIKLIVFQCYFDKGYSTARAMAEYFRIPVT
B570J29635_1012026	B570J29635_10120261	F094597	TLRKIYKASSDFIGDASLSAEQQVALKTRSLCIPLLADNPWIPSEDEEDDIKVIVLEDRGLDAIPNARSDERAKFDNVVVQYKRTIAYLREILNHTFLRAVYATSSRQAKLEYEEVQRNFINDHSNDDPNDEPAKFTALDIIEYIEDDCICSNDKALQSITNAITKMVRHNGQTLLDWLQSFVPIVNKY
B570J29635_1012602	B570J29635_10126021	F080897	EYLPDEVRNNKNVRVYAGKDTYAAGRLVQNWRKPSNPISKGKLLTKELEPDAFHIGVDDVNKCVHDTKQLIKEGKSFAILMPVSVTSEIARLENVDGERCHDKELAIKVSAMSKITLASSSEVWLINIPGEQFNHFINNDMEGLGLTGCQEVFQDSLAQAKETSGIIQDYEDIVMRENMESEAFP
B570J29635_1013023	B570J29635_10130231	F015961	TITSVCRXVDDFFIGLATQMPSNKNVELGGRDGFKFFKHGVSSYMLPKVRRINGGWWISIARQLKIFLCVTRIISDTTRSKFCDALSLLFEVHHGLRNPVFKDDLDSYQAKIDFLLTSLVDIASPWSKSQCQSIKFHWPRHWGHTRQV*
B570J29635_1013275	B570J29635_10132751	F104317	KVNQGDIFILQDQSSRTRDMYDLLIRPLENLFACDMPMSEDLLLAQNDVIKQKWIFSIITKISGHCHWPKKSTMFILRELSKIRILNQKALTESFDQNWNPVSRKCPMQMGARTTPEDIFDIADNKWNVNINDFNPGGRLYGIYVKMDEPLPSHIQHRFSPQQIPLMARDRLHQDIISIR
B570J29635_1013312	B570J29635_10133121	F015961	FAISIQVSREVDKFFIDLARQMPSNKNVELGGRDGFKFFKHGVTAYMLPKQRRINGGWWISIARQLKMFFCTTKIVSDTTRTKFCDALSLLFEVHHGLRNPVLKTDLDSYQGKIDFLLTTLVDIGLPWSKVQCNSIKYHWPRHWGHTRQVYVLMSALRYDMMSALIHD*
B570J29635_1013383	B570J29635_10133831	F020006	MPRNKPSLAERKRLLEETKQRLRLQQEARTIKRIEELDIEACERLGRQLQLEHKELNSELECSETDTARQYTLNLSDVEEDLNHSSTVETVNIDKSSSLLETPD*
B570J29635_1013739	B570J29635_10137391	F079613	PRVNIETKLDTLEEEREYLLEMCPVELRDSYDDGKEETLVRLLLRLLPAEYDMAVKNVKDLARIRKYSEAGNLVTITNCEDNTRANYAVDYLPDYTELRFELIRTYQLADRRRDEMNKKGGKKGHPSFPIMDGHNQPGAGQIRCYKCGVAGHRAGDPACRGKEGEVHKDAPEWFKKQN
B570J29635_1014198	B570J29635_10141981	F035188	MSASMTAKQMRTLLQSISTDPQLKQSKDSILLAEDQYPEHLDTLFNKLSVPTTLQNTMIXLQWNRNLCDSSYDAALKSTSITNQDYLRQTYQLIPTADNPWDLNTFRRWKYFVTNLCLSAVQDAMKAGDYGKSQKYLFQPDTNDDNKAKRHDTK
B570J29635_1015103	B570J29635_10151032	F098804	PVDQKSSIGAQSNGENEKHLAQIIKGQKDPIHLAEKGYLSNNLGKNNINFLTLXLVRKYLKKYL*
B570J29635_1015181	B570J29635_10151811	F006498	IIKDDPQARDWYCAEIRKILADRIEINYYTSTTPPLENYMESSNASKRKRLKEATFLRTWCLEKGKGLPTTTPPTSAHGKINHLWWGRIPIEDLYKHVLIRGIGLSALGKLDGETIKLAAQLEIPHHEGAGGEEDFTDKEAFQKHIRRVSNRRKRKRS*
B570J29635_1015565	B570J29635_10155651	F096661	KAEEIVPGISALGSDQRPLREIPGQLFPTDSHETDEXAKKFLAKFSSDSNKRNQNPSLLLDXLRELGMFGELSEDQSHITMPFEDVHRLVTTMRMTEIILNERIQNKRKAKLEFLTSQLNASECNNMPALLAELEKTKAALKQKYSFQQVGVFGNEPVIELEGIIHF
B570J29635_1015624	B570J29635_10156241	F038543	GHGLAATXIAQARMQATRVTITAEGGRDGDALEDIDQFFDQSIIKDQMELAVRMAEVTRATSEWHRRMTAENLSQSGYVVDLTKYTIGKNAFIYKPPTQAETIARGRKAKHIDHYVGPGTITSHLGTRSMVIRMNGRDFQRDAGMVLLEKPKALDHDPAIRDRRIIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002302: Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences