Sample 3300001547

Overview

Basic Information
IMG/M Taxon OID	3300001547 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0017769 \| Gp0056241 \| Ga0066314
Sample Name	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site C1 Bulk
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	160092211
Sequencing Scaffolds	69
Novel Protein Genes	71
Associated Families	57

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	4
All Organisms → cellular organisms → Archaea → Euryarchaeota	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Verstraetearchaeota	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	1
Not Available	18
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	3
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Proteiniphilum	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → Candidatus Cloacimonas → unclassified Candidatus Cloacimonas → Candidatus Cloacimonas sp. SDB	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2
All Organisms → cellular organisms → Archaea → TACK group	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Wetland → Microbial Community Impact On Carbon Sequestration In Managed Wetland Carbon Farming

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → wetland area → groundwater
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Location Information
Location	Twitchell Island, Sacramento and San Joaquin Delta, California, USA
Coordinates	Lat. (^o)	38.1075	Long. (^o)	-121.6497	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000926	Metagenome / Metatranscriptome	832	Y
F007154	Metagenome / Metatranscriptome	357	Y
F009011	Metagenome	324	Y
F011857	Metagenome / Metatranscriptome	286	Y
F016394	Metagenome	247	Y
F017668	Metagenome	239	Y
F018557	Metagenome / Metatranscriptome	234	Y
F019677	Metagenome / Metatranscriptome	228	Y
F021446	Metagenome / Metatranscriptome	219	Y
F028913	Metagenome / Metatranscriptome	190	Y
F031306	Metagenome	183	Y
F031313	Metagenome / Metatranscriptome	183	Y
F031716	Metagenome	182	Y
F031904	Metagenome / Metatranscriptome	181	Y
F032176	Metagenome / Metatranscriptome	180	Y
F032702	Metagenome	179	Y
F034003	Metagenome	176	Y
F035352	Metagenome / Metatranscriptome	172	Y
F035820	Metagenome / Metatranscriptome	171	Y
F040159	Metagenome	162	Y
F041288	Metagenome / Metatranscriptome	160	Y
F042655	Metagenome	158	Y
F042958	Metagenome	157	N
F045771	Metagenome	152	Y
F049734	Metagenome	146	Y
F054975	Metagenome / Metatranscriptome	139	N
F055831	Metagenome / Metatranscriptome	138	Y
F056356	Metagenome	137	Y
F059696	Metagenome	133	Y
F061018	Metagenome / Metatranscriptome	132	Y
F063812	Metagenome	129	N
F064855	Metagenome / Metatranscriptome	128	Y
F065905	Metagenome	127	Y
F065909	Metagenome / Metatranscriptome	127	Y
F066277	Metagenome	127	Y
F067249	Metagenome	126	Y
F067886	Metagenome	125	Y
F068525	Metagenome	124	Y
F071376	Metagenome	122	Y
F071802	Metagenome / Metatranscriptome	122	N
F072483	Metagenome	121	Y
F073724	Metagenome	120	Y
F074658	Metagenome / Metatranscriptome	119	Y
F076224	Metagenome	118	Y
F080201	Metagenome / Metatranscriptome	115	Y
F085648	Metagenome	111	Y
F086687	Metagenome	110	Y
F087389	Metagenome / Metatranscriptome	110	Y
F087857	Metagenome / Metatranscriptome	110	N
F088780	Metagenome	109	Y
F089112	Metagenome	109	Y
F097608	Metagenome	104	Y
F102133	Metagenome	102	Y
F102138	Metagenome	102	Y
F103506	Metagenome / Metatranscriptome	101	Y
F104007	Metagenome / Metatranscriptome	101	Y
F105437	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI20215J15232_1000390	All Organisms → cellular organisms → Archaea	9049	Open in IMG/M
JGI20215J15232_1000780	All Organisms → cellular organisms → Archaea → Euryarchaeota	5969	Open in IMG/M
JGI20215J15232_1001225	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	4607	Open in IMG/M
JGI20215J15232_1001377	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Verstraetearchaeota	4290	Open in IMG/M
JGI20215J15232_1001390	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4265	Open in IMG/M
JGI20215J15232_1002929	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2718	Open in IMG/M
JGI20215J15232_1003818	All Organisms → cellular organisms → Archaea	2360	Open in IMG/M
JGI20215J15232_1004695	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2095	Open in IMG/M
JGI20215J15232_1004785	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	2075	Open in IMG/M
JGI20215J15232_1005126	Not Available	1999	Open in IMG/M
JGI20215J15232_1005396	All Organisms → cellular organisms → Archaea → Euryarchaeota	1946	Open in IMG/M
JGI20215J15232_1005458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1933	Open in IMG/M
JGI20215J15232_1005839	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1868	Open in IMG/M
JGI20215J15232_1005900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1859	Open in IMG/M
JGI20215J15232_1006431	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1774	Open in IMG/M
JGI20215J15232_1006738	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
JGI20215J15232_1006871	All Organisms → cellular organisms → Archaea	1708	Open in IMG/M
JGI20215J15232_1007494	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
JGI20215J15232_1011768	Not Available	1257	Open in IMG/M
JGI20215J15232_1012063	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1239	Open in IMG/M
JGI20215J15232_1012314	Not Available	1223	Open in IMG/M
JGI20215J15232_1013569	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1157	Open in IMG/M
JGI20215J15232_1013972	Not Available	1138	Open in IMG/M
JGI20215J15232_1014224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1126	Open in IMG/M
JGI20215J15232_1014420	All Organisms → cellular organisms → Archaea	1117	Open in IMG/M
JGI20215J15232_1016318	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Proteiniphilum	1036	Open in IMG/M
JGI20215J15232_1016630	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1024	Open in IMG/M
JGI20215J15232_1017276	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → Candidatus Cloacimonas → unclassified Candidatus Cloacimonas → Candidatus Cloacimonas sp. SDB	1001	Open in IMG/M
JGI20215J15232_1018430	Not Available	965	Open in IMG/M
JGI20215J15232_1020874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	895	Open in IMG/M
JGI20215J15232_1021385	Not Available	882	Open in IMG/M
JGI20215J15232_1022699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	851	Open in IMG/M
JGI20215J15232_1022720	Not Available	850	Open in IMG/M
JGI20215J15232_1024518	Not Available	814	Open in IMG/M
JGI20215J15232_1025066	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	804	Open in IMG/M
JGI20215J15232_1026371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	781	Open in IMG/M
JGI20215J15232_1027566	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	761	Open in IMG/M
JGI20215J15232_1028308	Not Available	750	Open in IMG/M
JGI20215J15232_1028629	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	744	Open in IMG/M
JGI20215J15232_1028957	All Organisms → cellular organisms → Archaea → TACK group	739	Open in IMG/M
JGI20215J15232_1029646	Not Available	729	Open in IMG/M
JGI20215J15232_1030573	Not Available	716	Open in IMG/M
JGI20215J15232_1031098	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	709	Open in IMG/M
JGI20215J15232_1031604	Not Available	703	Open in IMG/M
JGI20215J15232_1032821	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	689	Open in IMG/M
JGI20215J15232_1033912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
JGI20215J15232_1034072	Not Available	674	Open in IMG/M
JGI20215J15232_1034798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	666	Open in IMG/M
JGI20215J15232_1034966	Not Available	665	Open in IMG/M
JGI20215J15232_1035926	Not Available	654	Open in IMG/M
JGI20215J15232_1039581	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	621	Open in IMG/M
JGI20215J15232_1039600	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	621	Open in IMG/M
JGI20215J15232_1039602	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	621	Open in IMG/M
JGI20215J15232_1039730	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
JGI20215J15232_1040216	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
JGI20215J15232_1040896	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	610	Open in IMG/M
JGI20215J15232_1042542	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	597	Open in IMG/M
JGI20215J15232_1042598	Not Available	597	Open in IMG/M
JGI20215J15232_1045192	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	579	Open in IMG/M
JGI20215J15232_1049113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	554	Open in IMG/M
JGI20215J15232_1049481	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
JGI20215J15232_1050353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	547	Open in IMG/M
JGI20215J15232_1050613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	546	Open in IMG/M
JGI20215J15232_1051761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
JGI20215J15232_1052276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
JGI20215J15232_1058110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
JGI20215J15232_1059009	Not Available	505	Open in IMG/M
JGI20215J15232_1059163	Not Available	505	Open in IMG/M
JGI20215J15232_1059967	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI20215J15232_1000390	JGI20215J15232_10003904	F018557	MTEPKNGRPIFFPENLVLFGNLALFLWIVLDSVAFMLYNFTTGIVFFILTLILIYGVLHLLGCLRPCYNCIKCTHGMGRLAALYFGRRIFKDYKYNYKLPTAIFFTLYIGGFPAAFALYSTIVDFSAIKAAVFVALLVFTTYGALTWRPRKPKNPKEEV*
JGI20215J15232_1000780	JGI20215J15232_10007803	F065905	MSPKNKLISLVIFVTALLVIFFQTGYRHFYEAFPWSVKAYHTVKYPASLKFISPNSQSILMIVTGTVIILIILAYYPRDSQSL*
JGI20215J15232_1001225	JGI20215J15232_100122510	F071376	LNPVGLWTLHFDWGPSGNYHWTRLYFNFDGTFAYLAGANEGSWVQVDDNIICRFKRLPETENNTVYSGIATRNFMSGIMMSFQGQKGHWYAVKKGTKVYSLNNGVNLPYLIEKESKAKFDPV
JGI20215J15232_1001377	JGI20215J15232_10013774	F071376	LNPVGSWTLHFDWGPKGNYNWASLYFNFDGTFAYLAGANEGAWSQVDDSIILRFKRTPNEENNTVYSGTASRNFMSGIMFSSQGEKGHWYAVKKGATVFSMKENVKIPYLVDKEGKPKLDPAGRKTEKLLQ*
JGI20215J15232_1001390	JGI20215J15232_10013903	F018557	MAEPKDGRPIFFPKKLVLFGNLALFVWIVLDAVAFLLFDLAIGIIFFIATLILVYGLLNILGCLRPCYNCIKCTHGMGRLAALYFGKRIFKDYKYNYKLPTAIFFTLYIGTFPAAFELYSAVLNFTFLKAAVFLVLLMFTTYSGLTWRTKNRXNT*
JGI20215J15232_1002929	JGI20215J15232_10029295	F085648	FVENTSGDFPVTFLMGELSLSEFSIIASELTPEIQLLEVDSSWEGKPTTIVVAMTEEQVGNMFXRRTKMRKLAVHV*
JGI20215J15232_1003818	JGI20215J15232_10038184	F017668	MNKGRLYEEFIPIEQLSYKGYNTPELANAKIGKFLDEAKKEMPPFVEKWVNTEIENPDWKATCEAMNERTLAREKWFIKWFGEQK*
JGI20215J15232_1004695	JGI20215J15232_10046952	F016394	MQTEELTYLAKKLRNSLPNVESFPLSXIYTTIKEQEKTKLNLPDFKELIYHLTGWDISLQVIRRQLEINHIVW*
JGI20215J15232_1004785	JGI20215J15232_10047853	F085648	KDEEMGMDLFRNKKTGQKVFFEHISEDFPATFIMGELSMSEFSLIASELTPEIHLLEVDRSWEGKPKTIVVAMTEEQVRNMFGRRTKMRKLAVHRVS*
JGI20215J15232_1005126	JGI20215J15232_10051262	F034003	MKKRNKRNPVITKSNQLSFDFNTNNPIEIHKPKFDITDLRKELAWEHRPMIEIVKS*
JGI20215J15232_1005396	JGI20215J15232_10053961	F063812	LTMSTKHHDSKKHDDAKPAPDCHFCKEKYVYPEHPTPSGICHKCQTKIGVIILIIFVITGGIVFFGLI*
JGI20215J15232_1005458	JGI20215J15232_10054582	F097608	MSNFEQGMSNGEVKSFVFFPSAFDIRYSIFCRSFLNFCTPNKAVPI*
JGI20215J15232_1005839	JGI20215J15232_10058394	F071802	MGVKASKPNYASVITKILIVLVILNIAGDVLAAAFFLWDPSLGELSVYGGLIASFAGKNGAVMITSAILLGYAVVYAVCVFGLLSKLKWAPPLVIAVSVVNRALALGVIFEPNVAWLIWSAWKLVIIALAFYL
JGI20215J15232_1005900	JGI20215J15232_10059002	F064855	MGEAGGGLPGNLPRHTQRAGAGDTAPPAVAAPYLQSLSRTLFVFCF*
JGI20215J15232_1006431	JGI20215J15232_10064312	F032702	LVTQEVDVHALEKTYVLVVRVVNFQRNEPIKDVNAKVSRLEKEPITLDQWAENLKDGTPFKRLILSVNPDNNGNVTAELAEGVYEVKVEKYGLNKVFELTQNNKVLFIEPKKHWWWIKF*
JGI20215J15232_1006738	JGI20215J15232_10067382	F042958	PIFIDDREFVHSVLAEAMEQWKQRETRDAVHDGMEFFEIANAIGKERTKSHQFIGAESIPERELEAGFTQASYIFAVDFQGGKIRKVK*
JGI20215J15232_1006871	JGI20215J15232_10068714	F011857	EKVIGTNCFNCKFIANNNEPVVLKELNNEGGIDPKNQDEMNRAEIADLITLPGGSKTDADTKRLCYNKKIEMYVTKRMCCAYWDNDGVKRPWKKQ*
JGI20215J15232_1007494	JGI20215J15232_10074942	F076224	KIREYTINFKFDSTFINYAETQSKHSFKVMVDSNICRVDIPYFKLPDQEISEIAAINPLIEQATNNIHFYAYKIPKIEKSKSEIKIEYYNDDSVYSYVVNYNQLNIDSLVQANSGTDLYNLEKFKSLKPSDDTMLIKYQFNKDYYNRYYSDDEFKQQMEELQKQLQEMSRDINNRKVRVRAQVTKSPGK*
JGI20215J15232_1011768	JGI20215J15232_10117682	F016394	MQTEDLVHLAKKVRSSLPNLEVFPLSTIYTIIKEQEKTDMNLPDFKELIYHLTGWDISLQVIRRQLEINQIAW*
JGI20215J15232_1012063	JGI20215J15232_10120633	F009011	MYTIVDWAIIITAILTALGVVFVLFELRHMSKHRDLEVTMKLFEWAETESLRKAFRWVEKEFDFESLEKYKLEVSKLFEVSDYPYQVEAYFEEVGFLVTKKFVDIDIIVDRLGSNIISNWQKLEPWVLAIRKERADETFGEHFELLHNKTLAYMKKTITV*
JGI20215J15232_1012314	JGI20215J15232_10123142	F042655	MHIYRDLNNSETISLVFDLKVFELTIPDEYIGYINKEIKNPKRPNTELLELWLERELSVENPGSYGNLPTDESHVTVQLLPNGDYEVTISDVCFRMIASHVQPEPHSHRMGNEDVFHFWLDIKTNKVHSKHHIKVRELGDK*
JGI20215J15232_1013569	JGI20215J15232_10135692	F035352	VPNYSKKPFLTNSDEEYLMLIEVSEEFERQKIDKTAREKSGNPAEIVLRNRLIRRNLTLSLIPDVTIQGSKIKNDLLLLKSGVDPNQKTYLSNQVKMVIEVKNNSVGGKTLENGKQEDPSKVMRVKFNELEATTNVRNFAVVVLSEMLLPPRTLYRWRFKEDVIGKENCKVFTLVARQTYPPGGLYIKSNIEDMLQKGQMKKTGEFLALINYLKCL*
JGI20215J15232_1013972	JGI20215J15232_10139721	F042655	IFELTIPKEDMEYINKEIKKPKRPNTELLELWLERELSIENEGSYGNLATDESHVSVQVLSNGNYKVSISDTCFKMITSHVQPEPHSHKINNEDVLHCWLDMKTNKLHANQHIEVREINSK*
JGI20215J15232_1014224	JGI20215J15232_10142241	F021446	MKTLSIALMAAFMLVLAATSTGQAQSAAEDLYNDPSPGGKYVYRGCNLAQVIFIRGDKLSEINELTLIIEVQGGQNSHTTRLTFPILAKRQEGNKLILDYQWPLGGDTYEATIIGGTLINRKTKGYLAGIREEMFTRE*
JGI20215J15232_1014420	JGI20215J15232_10144201	F088780	KYLNLLRKIERGLTVLALAPLSGLEKKERDRRLDERLRRLEQKHNRN*
JGI20215J15232_1016318	JGI20215J15232_10163181	F074658	MREEFNLLIKSCVTRTDPATKTKSIGLQADARVVMVFASPSGQFYFNMTNPADLSGPRHLDSFIVTRNFRPSTGTLQKRMPTLTRTATNQTAGPLWAIALISSHI
JGI20215J15232_1016630	JGI20215J15232_10166302	F105437	EKLKPVKSDGVRLDFNSLTEPEQLIILKNMELDEKYQGKWTHEAIMENKEVILKLNHIAVSRVIELFTFTMPRAMMLDEIEQWFFKFNFNEFFRRWFECQKNLKKWTKQDRKPEEMDKTRQRRLPARCAIRTKKRR*
JGI20215J15232_1017276	JGI20215J15232_10172762	F087389	MIEPYEELXXGXIXTVKKVLLFFMLMLIGAIVYIMSFVSDATLSSQTISSTIMPLIIIYGFXGIVLLIIGKKGHDYIMPR*
JGI20215J15232_1018430	JGI20215J15232_10184302	F073724	VEGVEELKMFDAMILKREIVRNYNIDVKILETFRDGLVLKIEKITNMSLLTLIADFVNKHQLNMLLENDVYFISNEILAPSEPTYLSE*
JGI20215J15232_1020874	JGI20215J15232_10208741	F007154	MHSWILTADPKAGKAKFALPGNSPHDRPVSRGIFSRSGEFATIPSPPLLLASANLPSAQDAFFKAWRNLSGPIWSEHQNQTPGRSRAASRWSAPSPGSRTCREDHAPSHRPQMSSGRLFLDRVGRHQSPSPLHRHEQINMHSLGVQAKGDISTLPGRATFLLCLDSNSDPV*
JGI20215J15232_1021385	JGI20215J15232_10213851	F068525	VSKVENELKEKINEIIRQKAESSISDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
JGI20215J15232_1022699	JGI20215J15232_10226991	F072483	MESDGLKRRYTSAHPEWNMKGYVSVHRIADGQILANIRKFRIYARLNGFISEGIFNNGQSALDATFALMASLNPPRIDYILDMRFSDPWPSDILKLWKKKALGIFSKYPQVYAVGVTGEDSPFWSQIYDIKVLFQKHGDRILGIFETPEKAEAFLDKLRNFELP*
JGI20215J15232_1022720	JGI20215J15232_10227201	F073724	MILKREMGKSCNVDVKILETMKDGLILRIMENIINKNSLVLITDFVNKHKLNMLFDNGVYFISNQLIAPSEPTFLSE*
JGI20215J15232_1024518	JGI20215J15232_10245181	F049734	MSESKNYEFQTQFTIVKKYHRHALWLILGLLFALDIFTTSMSLHLGNFEKNPLMIPFAGNPALHGIVKLLAYIFLFFVIERAVIFIQERKPEKTPFWIKLNFQTLYGLIIFVLIYLIWLYLYVVASNILIIS*
JGI20215J15232_1025066	JGI20215J15232_10250662	F080201	VNCQKCDSIIVCPEGLTGEKICNKCGLVVEDSPAFKSFTQWVPEWYSNWKEEDSETLKEWLTTLRSVTCQLNIPNYPYREEAARTIRKQNHILFRSQKLSKNKRATVAALMHLVLKEYN
JGI20215J15232_1026371	JGI20215J15232_10263711	F019677	RGHMITYSTAEAARILGIEKTRVRDWIVKGFIIPSWHKAMARGDKNLLTYDDLCSIYLFQQLLPKGFNRIQIAFIISKIAKRGLTFNLNSGSRYVTWNTKFPKEGGVVDILNEIPNYMMPKSIQMLVIDLLEVKGAVDRKRNKRGG*
JGI20215J15232_1027566	JGI20215J15232_10275661	F056356	LALLASCGRDLEQAKRYSDIKSETDSLISQANLIINEQKAINDSLVKVRDDIYKINTQKTKLPELDKKITKIVESKSNIENVRKHLEAIKKFAQNGEKATKRLIFYKRKYITYATEIQLHDENIMIQEITNGLSTKKYLSKYMPKEKK*
JGI20215J15232_1028308	JGI20215J15232_10283082	F054975	MTKQLFSIFDNKKKFFLISEDELKKFQHYVFDGLSVFDHPDARNLFHDVGSRQAQNDVRSWQLVCKYCPMNLRCEVLIEDTSKCAIFNKLTIRNYTLHAMEEIQFQRQRLHEILAGLKNGGTCDNHCELCILCDNVGHCVAEE
JGI20215J15232_1028629	JGI20215J15232_10286293	F032176	TGDIGIVKGVSLMKMIMGKNPTSVGLWTFMTMSEKLGWLNDTIAVVTFEATDPMWTELNITIWEWK*
JGI20215J15232_1028957	JGI20215J15232_10289571	F032702	LEKIANETTIETQKVDEISQKTYLLVVKVVNFQKNKPTKNATVKVFRLEKEPLTLKQWAENLKNGSPFKRLIVSMNTDNNGTVTVELAEGSYEVEEEKFGFNKVFDLTQNDE
JGI20215J15232_1029646	JGI20215J15232_10296462	F104007	MNTIKLLKKLLMAVTLLALLFSTACAGKNEIQSTDGQALVEQGNAYMTCLKDNDWRCAYALMSPFAQRLEDVAADLAEGVIDMDTVLKTYGPRISEWTFDRAQFVIRDGRTIGLLRGQVEYADGKRGQVNLDFEISDGTWKVRASELQTGIYLGL*
JGI20215J15232_1030573	JGI20215J15232_10305732	F040159	YTLGIQAQTTQKEFPKAGSGYNVMDAWSGIWSVQGEARDSISAPWYHVDWTLTGKRILNGYALEITHHWKTKYYTQNGVEITGYDPIKKICMTHIFYDDGTWFNSTPTFTDTRTCIEDGATYYPNGXVXVSRWTWNFSDDWRSFVVTGENLKDNNWWKAFEGKGTKSN*
JGI20215J15232_1031098	JGI20215J15232_10310982	F017668	MNKGRLFEELIPIEQLSYKGYTTPELANAKIRQVLDEAKKEMPLFTEKWVNTEIENPDWKATCEAMNERTLAREKWFIKWFGEEK*
JGI20215J15232_1031604	JGI20215J15232_10316041	F065905	MSPKNKLISLVIFITALLVIFFQTGYRHFYETFPWSVKAYHTVKYPASLGFISPVSQTILMIVTGAVI
JGI20215J15232_1032821	JGI20215J15232_10328211	F067249	PDVTIQGSKIKNDLLLLKSGVDPNQKTYPPNQVKMVIEVKNNSVGGKTLENGKQEDPSKVMRVKFNELEATTNVRNFAVIVLSEMLLPPRTPYRWRFKEDVIGKENCKVFTLVARQLYPPGGLYIKSNIEDMLQKGQMKKTGEFLALINYLKCL*
JGI20215J15232_1033912	JGI20215J15232_10339121	F087857	MKRNLIVVPLLVFAFMAFQIVPPAHAEPITLTIMAIAGITTVMTAAFTDMAVHGDAIVHGDAITQANSQQEKPAEVYAKDRSADSSKNQDAQATTVR*
JGI20215J15232_1034072	JGI20215J15232_10340721	F071376	LNPVGLWTLHFDWGPSGNYHWTPLYFNFDGTFAYLAGANEGAWTQVDDNIIWRFKRLPDAENNTVYSGNCTRNFMSGLMLSFQGEKGHWFAVKKGTKVYSTKDAETIPYLMNREPKLKLG
JGI20215J15232_1034798	JGI20215J15232_10347981	F045771	MTRRIFLDTEWTAPPWSDRCELMWIGLADEDMRSWYGISSEVVIDPSTNAFVSGAFRLIDPGEPRLSRAQLAAAVMDFCGAVDEFWVWIPTLERFSEWSGLADKAAEVYAKFRDVDLQMLRALLNPWPAGWPNRLHDLNAA
JGI20215J15232_1034966	JGI20215J15232_10349661	F031306	MKNFKCPICGGPTEKMWENPTKTRYGMRCMNGHENTGNKSGGSKQYPVILVSSEELE*
JGI20215J15232_1035926	JGI20215J15232_10359261	F041288	MANTKTDHRIPAALATILVVSAVLLLSVWGFTATMLNSRQLPTEQTLKGSTGSEKFNTLRFETYGGQPEYRLIGYFLYKDGIRVSGDGPQLEPIGKLSLNEVFADQERVAKAKFYNTSKLNIREIIRDNSVIGYAVSDLKMEITLWDKTTDPSSISLELRFKDLQAKGERYYGGP
JGI20215J15232_1039581	JGI20215J15232_10395812	F056356	ILILALLASCGRDLEQAKRYSDIKSETDSLITQAKLIINEQKAMTDSLTEIRDDIYKNKSQKYKLSELDKEVTKNAEIKTNIETVRKHLESIKKFAENGERATKRLLYFKRKYITYATEIQVHDENIMIQEITDGLSAKKYLSKYLPKEKK*
JGI20215J15232_1039600	JGI20215J15232_10396001	F080201	VKCGKCASAVIYPEGLDGEIVCATCGLVIEGTFSLKHFSQWKPEWFSNWNEQDSETLKEWLTTLRAVSCQLNIPNFPYREEAARTIRKQNRILSKSKKLSKXKRATVAALMXLVLAEYDKVRSIKDISNELSLDKKLVLKRVWILNKTLNQERSEIKIQ
JGI20215J15232_1039602	JGI20215J15232_10396021	F086687	LKPWQINKRVSSLANQFDSSIKTETRIDLSSFSEPERRLLDKVQEFIDQYAPGKPPKDVIEKNADLWYKGLEIFGKKATELFVEIVPESFCCDELESWYFKLYFYNFMVDWQESLQKLRKMPKEQHDTLLCERREMSLLDKVFRLKRYPPP
JGI20215J15232_1039730	JGI20215J15232_10397301	F000926	MGRFQTQELNGLAVQQLEVLVRTAVFKSAXALVGFLLQEAADRIDTDYQAKPGQQYKGRVRLQVEGMFGSFPLERDYYYHPGKEQGHYPADAALGLENGHTPALTRLM
JGI20215J15232_1040216	JGI20215J15232_10402162	F059696	SGPAAVATAGEEIAAAHADGRPHRDSMRIDKIAQFRYYRMNKIQ*
JGI20215J15232_1040896	JGI20215J15232_10408963	F031313	KQGTSASADSANDAVPVAVTVRVTQYLINGIEFASIDFWFGYKAVMGWRKALN*
JGI20215J15232_1042542	JGI20215J15232_10425422	F067886	DTLVPHGEKIYRDKKGHERSIAPDQYLNRIFSYIEQNSGNDPGVSLIESEMAYIFAKAEHPHEKTRVSHERVSKDDVELAIIHMYLVIAEIAKIRKIETIYLKTSPSGNFDTVSKLSPPGLE*
JGI20215J15232_1042598	JGI20215J15232_10425981	F102133	MEQPGQPPDSGGSKLKILDSLKTAALFLIAAGLFVMSYVFYDVMGKHGRYVPVSDDDEQVVVMDTHTGEVWSVNCETKETASLKIFNSIAGEPQIFPKK
JGI20215J15232_1045192	JGI20215J15232_10451921	F065909	GANIIFIIKGDFGLIFIIVARHSIEFCPGGLLRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETDDNTALNIAVEPLRLIGEVTIIPVLKFFKEGYDWGKKIGIQE*
JGI20215J15232_1049113	JGI20215J15232_10491132	F031716	MSRFSSGPWHVEEENGSYGVFSNDALLAVTLSDDLKDKDAAKANAHLMASAPRLLEVIKEIKEHLDNNMIVTGEGLKINDSHLRESIIDAILKAEGHRL
JGI20215J15232_1049481	JGI20215J15232_10494812	F035820	LADADLTKRPLHTLPYEPLLAKLKSLTSLRAVCDPSSDTGLKIEIGPFPGRMEASGW*
JGI20215J15232_1050353	JGI20215J15232_10503531	F055831	MQAIADLKALLLEILESAFQNGDVHATQQMGVNMSNAVKREGVVIIQNQNVEVLARIMPTMVKTLKLCDAM
JGI20215J15232_1050613	JGI20215J15232_10506131	F061018	RGTMNIYTLDKGNGFCVSNKKASKKDEWTEIIDRVEAAILMSLANKVLAEAVDRQDQIDEHRRQLKLVELRSFSRKDSTG*
JGI20215J15232_1051761	JGI20215J15232_10517612	F089112	VEQLGPSARQYLALIRAGTRSLRAELEHLLLLTTLYGPALVEAALGACLAQAIVGSDQVERWLTLQHAGPLAPPPLTLGDPRLTVPPVRPNLARFDALLVDPDGAADPPEEPDDPVDA*
JGI20215J15232_1052276	JGI20215J15232_10522762	F031904	MKRTPKVIQPFPRLADIERAVVAETREWGRQRLEERLQALADESGEVFPPPATAAKSRHAAKRTGRDQAGR*
JGI20215J15232_1054826	JGI20215J15232_10548262	F102138	LVLQNKVRDLTIRQQLRTLPEIRKYFGEYLSDKLYGMNYKVTILNDERNKIIVFTHDSFTGRAALEIFHNTVANDLRALGFKQIRYKWYDLEKYKEEKYIHYNFSDLPDNEPRRFNLSILKNQ*
JGI20215J15232_1055192	JGI20215J15232_10551921	F103506	MENIKSNQEAEHFIMLDVLNTANVNEFDRSHPYVQIIYPSDMNFYSDNKAAESHPENGLTHKERKKYFLTILLNLDADH*
JGI20215J15232_1058110	JGI20215J15232_10581101	F028913	MRLRTVVGVVKVVVWQGKDPTDRHWGCPIRERWGLRAHQQMSPALEEKVAFTATLVGSYEAAEQVAGKWGCPVDDSVIHALV
JGI20215J15232_1059009	JGI20215J15232_10590091	F066277	IKVRNIAGLVTGKINIMNRKKFVTLFSTGILGAVLIKANPLNQLFSKFKSKKNNSVKVKINPNAVNREKSGKKNG*
JGI20215J15232_1059163	JGI20215J15232_10591631	F088780	MNLFKKIERSLTILAMAPLVGLEGRERERRLEERLKRSXXXXNSFN*
JGI20215J15232_1059967	JGI20215J15232_10599671	F067249	HEKSGNPAEIVLRNRLLTRNLNLSTIPNVTIEGSKIKNGLLLLKNGVDPNQEVYSPDQVKMVIEVKNNSVGAKTLKNGKQEDPNKALRLKFNELEATTNVRNFAVIVFSEMLLPPKAPFKWRFKQEKIGKANCKVFTLVARQLYPSGGLYIRANIDEMLQKGQMKK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001547: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site C1 Bulk

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences