Sample 3300001458

Overview

Basic Information
IMG/M Taxon OID	3300001458 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0094242 \| Gp0055933 \| Ga0012421
Sample Name	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - All Sites - gte1k
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	153768584
Sequencing Scaffolds	13
Novel Protein Genes	14
Associated Families	13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
Not Available	4
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	3
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Mid Cayman Rise, Cayman Islands, United Kingdom
Coordinates	Lat. (^o)	18.35	Long. (^o)	-81.85	Alt. (m)	N/A	Depth (m)	2000 to 4000
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F003092	Metagenome / Metatranscriptome	508	Y
F003827	Metagenome / Metatranscriptome	466	Y
F010921	Metagenome / Metatranscriptome	297	Y
F012582	Metagenome / Metatranscriptome	279	Y
F015945	Metagenome / Metatranscriptome	251	Y
F017150	Metagenome / Metatranscriptome	242	Y
F023708	Metagenome	209	Y
F046425	Metagenome	151	N
F047906	Metagenome / Metatranscriptome	149	N
F078613	Metagenome / Metatranscriptome	116	N
F081450	Metagenome	114	Y
F089571	Metagenome	109	N
F100047	Metagenome	103	Y

Family

Category

Number of Sequences

3D Structure?

F003092

Metagenome / Metatranscriptome

508

F003827

Metagenome / Metatranscriptome

466

F010921

Metagenome / Metatranscriptome

297

F012582

Metagenome / Metatranscriptome

279

F015945

Metagenome / Metatranscriptome

251

F017150

Metagenome / Metatranscriptome

242

F023708

Metagenome

209

F046425

Metagenome

151

F047906

Metagenome / Metatranscriptome

149

F078613

Metagenome / Metatranscriptome

116

F081450

Metagenome

114

F089571

Metagenome

109

F100047

Metagenome

103

Scaffold	Taxonomy	Length	IMG/M Link
MCRcombined_1005377	All Organisms → cellular organisms → Bacteria	4154	Open in IMG/M
MCRcombined_1007582	Not Available	1293	Open in IMG/M
MCRcombined_1009965	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1490	Open in IMG/M
MCRcombined_1012441	Not Available	1020	Open in IMG/M
MCRcombined_1013643	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1910	Open in IMG/M
MCRcombined_1018701	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
MCRcombined_1018779	All Organisms → Viruses → Predicted Viral	1359	Open in IMG/M
MCRcombined_1019315	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1201	Open in IMG/M
MCRcombined_1019725	All Organisms → Viruses → Predicted Viral	1298	Open in IMG/M
MCRcombined_1023359	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	4381	Open in IMG/M
MCRcombined_1025209	Not Available	1201	Open in IMG/M
MCRcombined_1026387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1223	Open in IMG/M
MCRcombined_1032716	Not Available	1000	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

MCRcombined_1005377

All Organisms → cellular organisms → Bacteria

4154

Open in IMG/M

MCRcombined_1007582

Not Available

1293

Open in IMG/M

MCRcombined_1009965

All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium

1490

Open in IMG/M

MCRcombined_1012441

Not Available

1020

Open in IMG/M

MCRcombined_1013643

All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium

1910

Open in IMG/M

MCRcombined_1018701

All Organisms → Viruses → Predicted Viral

1511

Open in IMG/M

MCRcombined_1018779

All Organisms → Viruses → Predicted Viral

1359

Open in IMG/M

MCRcombined_1019315

All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium

1201

Open in IMG/M

MCRcombined_1019725

All Organisms → Viruses → Predicted Viral

1298

Open in IMG/M

MCRcombined_1023359

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon

4381

Open in IMG/M

MCRcombined_1025209

Not Available

1201

Open in IMG/M

MCRcombined_1026387

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium

1223

Open in IMG/M

MCRcombined_1032716

Not Available

1000

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
MCRcombined_1005377	MCRcombined_10053773	F047906	VQEERRLFRLRGIAIVALAAKFTQKRTVTKEHTPDAIRVPVAHRPVVGLGVLAVRWHHAVTKVRVALRLDMLAVAKRVSRVEIKFAVTAKAGLVQTQRLAVANAVVIRIVVAERVA*
MCRcombined_1007582	MCRcombined_10075822	F100047	MALTIARTETQLTTVAGVFQAMDNLMASTVSSSFVCPATVSKLVSVEVCTTADASEEFGVLIRLSGNSLSDGEQYVAGGANVASTTATGTAMNYVSKDTDFNVISGNSIECAIATTDAAVISATVVMTFA*
MCRcombined_1009965	MCRcombined_10099651	F089571	MIKKDRKMYQNIIVLMIPILFLITPAKSQHVKQKYATTEMDEKLILNENGTWEYLGEDKQNYTLKKVPPKTYNYDSTPQTWEERTEQAAHEYWRIRAHAELDRLGISVTKYDPTTSDVPLFIKLEGGRIRTDFDPFTPLARGEVIDIAGLWNPSKGDNPTLNIHGKLFLQITMKLEDQKKLFSQYKQRNYIPIPEDFQRILKFRDSLDVISIGMHDYNRDNTHIWPGIPHSFLYAPPGTHYDPYNPPIIHGDGFPYIQRGHLTLARREIPMTNSEYDNLLNHIDKLEGYGPIKISYDMGNGIIESITFEEIWLKINPYNGDPAHLLRKINLLKN*
MCRcombined_1012441	MCRcombined_10124412	F010921	MAIKVKGRVKIVEGKAYVHPLTIPELEFLLTIVADAGHKMEDVPKVLQVTKKLREEYKLIKEHQST*
MCRcombined_1013643	MCRcombined_10136432	F089571	MMNMVKEKERKMLQNIIVLIISVLFLIAPVSSQHVQQKYAITDKNEKVFLNDNGTWEYLGEDKQNYTLKKVPPKTYNYEFKPQTWEERLEQAAHEYWRIRAYAELNQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDFDPFTPLARGEVINIAGLWNPDRGDNPTLKIQGKLFLQITMKLVDQKKLFSQYNQRNYIPISEDFQRILKFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSPYDPDNPPVIRGDGFPYIQRGHLTLARREIPMTNAEYENLIKHIDKLEGHGPIKVSYDMGDGIIETVTFEEVWLKINPYNGEPTRILRKISLLKK*
MCRcombined_1018701	MCRcombined_10187011	F078613	MEYSDWIESPKSARVWLEDSMTTLCQFAYVTPLHKVMHWDDINKRRTLCYQGKYEKCTTCDRGIPQIHDYTYGIYTSSGDKSIRYLSTALSSHTNFQTIFRDYLKANTNPCDLLFQIRKGDIVTPKGYETKGYEIEVLEDEPFIAEADRPSPFQEGKWAIPRMVAEALLDIDGHPMNLLDLYTEMKERFPNIEDRDIKEYAILLGEGGVVDLRNAKEKEWAI*
MCRcombined_1018779	MCRcombined_10187792	F023708	VISLKSLLKNLKEAQITMPIKGMETPLDAKVQIPGYGVMTRRQLQKSIQRFIKEVSKY
MCRcombined_1019315	MCRcombined_10193152	F003092	MFKKLLLVMSLLFTFSCEDNIVAYVDEETSMKLWLNGVEVDVEATYEKITTYGEEVEYIADNGHTYTKKIFVIHFQEEGGRVELDKEHYAIVFTDWEGSTSNNQPVDVGNYKWPAECPICVRKCICDHGAPSKWVRMEIFGEEDVAVSGVARISRVDEKDGGWIISGNGEGIFYDPYTEANIEGKIEFNNLEMKTDSEESPYYDYGGR*
MCRcombined_1019725	MCRcombined_10197252	F081450	MTQFEEKSCKVLGVIIFLLVVMTWLQISGCYSPPQPEMEGEPFPDYIDDVDTSNLV*
MCRcombined_1019725	MCRcombined_10197253	F012582	MTEFHKKLRHLSTTMLHWAEDNKTQRKEIEGIAGDYEIPQRNGVDWKEDFKFVTKLDRMLSSDIGDKLKKKEMKMCNKLYRYYGSVYDPV*
MCRcombined_1023359	MCRcombined_10233591	F003827	VAEGRWADWQVRTIAENMAEKRPKREWFEGDGHGEDYLTSLKSWSHITARQLYSMELEERQLIIFVHHLGIEHVGIETFDPQDKGRYAQQSDYAPSEGDTYNTPRLDIAGSE*
MCRcombined_1025209	MCRcombined_10252091	F046425	MNLIIDKGCFKIYYRDPVSTGNRLFLSTRTATLMDAVAEFNLIKGGFDTPLRVERYNFDGKLTDVFNMDGXXXXTMDGRYDVPRRKDDAYSLDLVDRMGI*
MCRcombined_1026387	MCRcombined_10263871	F017150	MADRINLLVDYEDQADWLQDSIVIENVIMGQAHDQLIVELEQAVYDNTRSMYNPPSSHISIVGFSPADSDVIVKSGVNYWVDSEN
MCRcombined_1032716	MCRcombined_10327164	F015945	IAAHFSAMNDSVTLINATVADDSEALLIYGNDAEVKLMVTRNTDHLEIQAAKDWYSDSSNSKTSYTGAVTAGKAYVDE*

Scaffold ID

Protein ID

Family

Sequence

MCRcombined_1005377

MCRcombined_10053773

F047906

VQEERRLFRLRGIAIVALAAKFTQKRTVTKEHTPDAIRVPVAHRPVVGLGVLAVRWHHAVTKVRVALRLDMLAVAKRVSRVEIKFAVTAKAGLVQTQRLAVANAVVIRIVVAERVA*

MCRcombined_1007582

MCRcombined_10075822

F100047

MALTIARTETQLTTVAGVFQAMDNLMASTVSSSFVCPATVSKLVSVEVCTTADASEEFGVLIRLSGNSLSDGEQYVAGGANVASTTATGTAMNYVSKDTDFNVISGNSIECAIATTDAAVISATVVMTFA*

MCRcombined_1009965

MCRcombined_10099651

F089571

MIKKDRKMYQNIIVLMIPILFLITPAKSQHVKQKYATTEMDEKLILNENGTWEYLGEDKQNYTLKKVPPKTYNYDSTPQTWEERTEQAAHEYWRIRAHAELDRLGISVTKYDPTTSDVPLFIKLEGGRIRTDFDPFTPLARGEVIDIAGLWNPSKGDNPTLNIHGKLFLQITMKLEDQKKLFSQYKQRNYIPIPEDFQRILKFRDSLDVISIGMHDYNRDNTHIWPGIPHSFLYAPPGTHYDPYNPPIIHGDGFPYIQRGHLTLARREIPMTNSEYDNLLNHIDKLEGYGPIKISYDMGNGIIESITFEEIWLKINPYNGDPAHLLRKINLLKN*

MCRcombined_1012441

MCRcombined_10124412

F010921

MAIKVKGRVKIVEGKAYVHPLTIPELEFLLTIVADAGHKMEDVPKVLQVTKKLREEYKLIKEHQST*

MCRcombined_1013643

MCRcombined_10136432

F089571

MMNMVKEKERKMLQNIIVLIISVLFLIAPVSSQHVQQKYAITDKNEKVFLNDNGTWEYLGEDKQNYTLKKVPPKTYNYEFKPQTWEERLEQAAHEYWRIRAYAELNQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDFDPFTPLARGEVINIAGLWNPDRGDNPTLKIQGKLFLQITMKLVDQKKLFSQYNQRNYIPISEDFQRILKFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSPYDPDNPPVIRGDGFPYIQRGHLTLARREIPMTNAEYENLIKHIDKLEGHGPIKVSYDMGDGIIETVTFEEVWLKINPYNGEPTRILRKISLLKK*

MCRcombined_1018701

MCRcombined_10187011

F078613

MEYSDWIESPKSARVWLEDSMTTLCQFAYVTPLHKVMHWDDINKRRTLCYQGKYEKCTTCDRGIPQIHDYTYGIYTSSGDKSIRYLSTALSSHTNFQTIFRDYLKANTNPCDLLFQIRKGDIVTPKGYETKGYEIEVLEDEPFIAEADRPSPFQEGKWAIPRMVAEALLDIDGHPMNLLDLYTEMKERFPNIEDRDIKEYAILLGEGGVVDLRNAKEKEWAI*

MCRcombined_1018779

MCRcombined_10187792

F023708

VISLKSLLKNLKEAQITMPIKGMETPLDAKVQIPGYGVMTRRQLQKSIQRFIKEVSKY

MCRcombined_1019315

MCRcombined_10193152

F003092

MFKKLLLVMSLLFTFSCEDNIVAYVDEETSMKLWLNGVEVDVEATYEKITTYGEEVEYIADNGHTYTKKIFVIHFQEEGGRVELDKEHYAIVFTDWEGSTSNNQPVDVGNYKWPAECPICVRKCICDHGAPSKWVRMEIFGEEDVAVSGVARISRVDEKDGGWIISGNGEGIFYDPYTEANIEGKIEFNNLEMKTDSEESPYYDYGGR*

MCRcombined_1019725

MCRcombined_10197252

F081450

MTQFEEKSCKVLGVIIFLLVVMTWLQISGCYSPPQPEMEGEPFPDYIDDVDTSNLV*

MCRcombined_1019725

MCRcombined_10197253

F012582

MTEFHKKLRHLSTTMLHWAEDNKTQRKEIEGIAGDYEIPQRNGVDWKEDFKFVTKLDRMLSSDIGDKLKKKEMKMCNKLYRYYGSVYDPV*

MCRcombined_1023359

MCRcombined_10233591

F003827

VAEGRWADWQVRTIAENMAEKRPKREWFEGDGHGEDYLTSLKSWSHITARQLYSMELEERQLIIFVHHLGIEHVGIETFDPQDKGRYAQQSDYAPSEGDTYNTPRLDIAGSE*

MCRcombined_1025209

MCRcombined_10252091

F046425

MNLIIDKGCFKIYYRDPVSTGNRLFLSTRTATLMDAVAEFNLIKGGFDTPLRVERYNFDGKLTDVFNMDGXXXXTMDGRYDVPRRKDDAYSLDLVDRMGI*

MCRcombined_1026387

MCRcombined_10263871

F017150

MADRINLLVDYEDQADWLQDSIVIENVIMGQAHDQLIVELEQAVYDNTRSMYNPPSSHISIVGFSPADSDVIVKSGVNYWVDSEN

MCRcombined_1032716

MCRcombined_10327164

F015945

IAAHFSAMNDSVTLINATVADDSEALLIYGNDAEVKLMVTRNTDHLEIQAAKDWYSDSSNSKTSYTGAVTAGKAYVDE*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001458: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - All Sites - gte1k

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences