Sample 3300000310

Overview

Basic Information
IMG/M Taxon OID	3300000310 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063443 \| Gp0052056 \| Ga0026058
Sample Name	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	120209763
Sequencing Scaffolds	37
Novel Protein Genes	41
Associated Families	37

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin095	1
Not Available	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → methanotrophic bacterial endosymbiont of Bathymodiolus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wetland Microbial Communities From Twitchell Island In The Sacramento Delta
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland → Wetland Microbial Communities From Twitchell Island In The Sacramento Delta

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → saline wetland → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Location Information
Location	Twitchell Island in the Sacramento/San Joaquin Delta, CA
Coordinates	Lat. (^o)	38.107057	Long. (^o)	-121.647578	Alt. (m)	N/A	Depth (m)	0 to .12
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F019677	Metagenome / Metatranscriptome	228	Y
F028848	Metagenome / Metatranscriptome	190	N
F029478	Metagenome / Metatranscriptome	188	Y
F031716	Metagenome	182	Y
F033858	Metagenome / Metatranscriptome	176	N
F034230	Metagenome / Metatranscriptome	175	Y
F040402	Metagenome / Metatranscriptome	162	Y
F042655	Metagenome	158	Y
F046091	Metagenome	152	Y
F049074	Metagenome / Metatranscriptome	147	N
F054136	Metagenome	140	Y
F054975	Metagenome / Metatranscriptome	139	N
F055831	Metagenome / Metatranscriptome	138	Y
F056119	Metagenome / Metatranscriptome	138	Y
F056714	Metagenome	137	Y
F059696	Metagenome	133	Y
F061012	Metagenome	132	Y
F062885	Metagenome	130	Y
F065905	Metagenome	127	Y
F067886	Metagenome	125	Y
F068995	Metagenome	124	Y
F070832	Metagenome / Metatranscriptome	122	Y
F071280	Metagenome / Metatranscriptome	122	Y
F071793	Metagenome / Metatranscriptome	122	Y
F072484	Metagenome	121	Y
F080208	Metagenome / Metatranscriptome	115	Y
F081500	Metagenome	114	Y
F087857	Metagenome / Metatranscriptome	110	N
F093372	Metagenome	106	Y
F094063	Metagenome	106	Y
F097602	Metagenome / Metatranscriptome	104	Y
F097608	Metagenome	104	Y
F100290	Metagenome / Metatranscriptome	102	Y
F101438	Metagenome / Metatranscriptome	102	N
F102133	Metagenome	102	Y
F102634	Metagenome / Metatranscriptome	101	Y
F105433	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
WSSedA1Ba2DRAFT_1001461	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	3925	Open in IMG/M
WSSedA1Ba2DRAFT_1001942	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3262	Open in IMG/M
WSSedA1Ba2DRAFT_1002669	All Organisms → cellular organisms → Bacteria → Proteobacteria	2668	Open in IMG/M
WSSedA1Ba2DRAFT_1003772	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.BinA087	2160	Open in IMG/M
WSSedA1Ba2DRAFT_1004320	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
WSSedA1Ba2DRAFT_1005329	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
WSSedA1Ba2DRAFT_1010613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1160	Open in IMG/M
WSSedA1Ba2DRAFT_1011427	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1108	Open in IMG/M
WSSedA1Ba2DRAFT_1012046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	1075	Open in IMG/M
WSSedA1Ba2DRAFT_1012527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1050	Open in IMG/M
WSSedA1Ba2DRAFT_1015305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin095	933	Open in IMG/M
WSSedA1Ba2DRAFT_1016489	Not Available	892	Open in IMG/M
WSSedA1Ba2DRAFT_1017781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	854	Open in IMG/M
WSSedA1Ba2DRAFT_1018760	Not Available	828	Open in IMG/M
WSSedA1Ba2DRAFT_1024262	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
WSSedA1Ba2DRAFT_1024741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	709	Open in IMG/M
WSSedA1Ba2DRAFT_1025377	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
WSSedA1Ba2DRAFT_1027274	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
WSSedA1Ba2DRAFT_1028982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	651	Open in IMG/M
WSSedA1Ba2DRAFT_1030645	Not Available	632	Open in IMG/M
WSSedA1Ba2DRAFT_1032015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	618	Open in IMG/M
WSSedA1Ba2DRAFT_1033723	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
WSSedA1Ba2DRAFT_1035220	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
WSSedA1Ba2DRAFT_1036530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	578	Open in IMG/M
WSSedA1Ba2DRAFT_1037599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	570	Open in IMG/M
WSSedA1Ba2DRAFT_1037755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	569	Open in IMG/M
WSSedA1Ba2DRAFT_1038240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	565	Open in IMG/M
WSSedA1Ba2DRAFT_1038551	Not Available	563	Open in IMG/M
WSSedA1Ba2DRAFT_1038918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	560	Open in IMG/M
WSSedA1Ba2DRAFT_1041412	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
WSSedA1Ba2DRAFT_1042333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	537	Open in IMG/M
WSSedA1Ba2DRAFT_1042614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	535	Open in IMG/M
WSSedA1Ba2DRAFT_1043595	Not Available	529	Open in IMG/M
WSSedA1Ba2DRAFT_1044291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	525	Open in IMG/M
WSSedA1Ba2DRAFT_1045151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	520	Open in IMG/M
WSSedA1Ba2DRAFT_1046000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	515	Open in IMG/M
WSSedA1Ba2DRAFT_1048702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → methanotrophic bacterial endosymbiont of Bathymodiolus sp.	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
WSSedA1Ba2DRAFT_1001461	WSSedA1Ba2DRAFT_10014611	F031716	CMSRFTPGPWLVKEENGSYGVFSNDALLAITLSDDIQDKDAEKANAHLMATAPRLLEIIKEIKEHLDNNMIVTEEGLKINDSHLRESIIDAILRAEGYRL*
WSSedA1Ba2DRAFT_1001942	WSSedA1Ba2DRAFT_10019423	F065905	MSPKNKLISLVIFITALLVIFFQTGYRHFYETFPWSVKAYHTVKYPASLGFISPGSQTILMIVTGAVIILIILAYYPKDTQSL*
WSSedA1Ba2DRAFT_1002669	WSSedA1Ba2DRAFT_10026691	F087857	MKRNFIVVPLLVIAFVAFQIVPPAHAEPITLTIMAIAGITTVMTAACTDMAVHGEAITQANSQQEKPAEVYAKDRSADSSKKQDGEATTVR*
WSSedA1Ba2DRAFT_1003772	WSSedA1Ba2DRAFT_10037721	F105433	MPENTSSTRIEEASDSLNTGKFYILLLFVSLIGVIGALMMIAFIFLQDILTAILWKDIPVDSLTPVFNP
WSSedA1Ba2DRAFT_1004320	WSSedA1Ba2DRAFT_10043202	F072484	MRNTLNNRKGWLVFLVTLFGLMWSTSLHAANFLFFWSASTDPSATGYGIYQRTGGSSYVKIDEVSVQDLDNPATPSYLVTGLTDGNTYWFAATSISAFGTESDLSNQTCITVNGQLVECTDNDDNGTTVFISCFISAAGL*
WSSedA1Ba2DRAFT_1004356	WSSedA1Ba2DRAFT_10043561	F102133	LKILDSLKTSALFLIAAGLFVMSFVIYDVMGKHGRYVPVSDDDEKVVVMDTHTGEVWSVNYESKETASLKIFNPI
WSSedA1Ba2DRAFT_1005329	WSSedA1Ba2DRAFT_10053291	F028848	MNNGASLGKNTLDLFTKWSEGHLELLNQRQQMFKEAGDSFLGVVRESFEMKIPEESLKRLSGNMLTLCKLPLNTLGDHAGLEAYSFEIKKLVAGMPVALSGNGFSEEFRQYGKASWSNGSKAHTACMNWMMSL
WSSedA1Ba2DRAFT_1010613	WSSedA1Ba2DRAFT_10106132	F071793	MENRKSNRHKTDQSIVGTVFTSHNFNDMFYGKMKNYCDLGLYAEFQPCLKDGTVLLVRTTSSAPERLPSKIEEGFRFVSLVEVKWSKPLSANGAVCYVTGLKHLAIW*
WSSedA1Ba2DRAFT_1011427	WSSedA1Ba2DRAFT_10114273	F067886	FIRENCPRAGEQLLEINERMRYFDPESYSQALGAVQKILVIVADTLVPHGEKIYRDKKGHERSIAPDQYLNRIFSYIEQNSGNDPGVSLIESEMAYIFAKAEHPHEKTRVSHERVSKDDVELAIIHMYLVIAEIAKIRKIETIYLKTSPSGNFDTVSKLSPPGLE*
WSSedA1Ba2DRAFT_1012046	WSSedA1Ba2DRAFT_10120462	F080208	GGMSHGLHHEGGTTMEVEEFLNVINECDVLREDIDDIRGRVALTKAEGGKLAQATEHVDKAKTILADLFPTIRSLDDEVREDLSEELNETD*
WSSedA1Ba2DRAFT_1012527	WSSedA1Ba2DRAFT_10125272	F059696	LSGPAAVATAGEEIAAAHADGRPQRAYMRIDRIAQFR*
WSSedA1Ba2DRAFT_1015305	WSSedA1Ba2DRAFT_10153052	F049074	LKKIMEITGTSDEAARKVVDEVVAFAKEKVPGPFQHFVDQIFEREE*
WSSedA1Ba2DRAFT_1015673	WSSedA1Ba2DRAFT_10156731	F029478	MGCPFNSIIRAAAALLIAIALLGCVSLRIEKVQQGADVLPPTVEFLQKKTLLAEILSGYGAPADIVDMNGEFALHYRRALYRGMKVSMGVPLKSALMPNPSMEANGNLSRYDTAVFIFTADGVLKDMKYEKGTS
WSSedA1Ba2DRAFT_1016489	WSSedA1Ba2DRAFT_10164892	F033858	MSEAGSVEKIESLRKIRLSATMLEVGFKSENLSEMIQCQIELEELAARLQAEQGDLVTPQQCEAAKKSLDAFVALVDQAIEKAALNQGITPGSPKPKPTALE*
WSSedA1Ba2DRAFT_1017781	WSSedA1Ba2DRAFT_10177811	F040402	STRMNAAVAAALATLISACSIAHLGWLRNSPDVSRAFETLQVSPDDRYWYLYLENSPYAVLGLNREYRFEDIQWTEVTPGSEVFQKVVGLVQNFPVPGSRTSGAYILDAKGDRIGVWYSSMSAGISVDPSTRVVFITTGTPWMSGDGNDNGRD*
WSSedA1Ba2DRAFT_1018760	WSSedA1Ba2DRAFT_10187603	F046091	MEVKITPSYILTEEHGKSQFGVPVLVNXXTNEAYNPSDLLQAYPSWGSMQARDVVRSLVNEKRFTDQEKFFIERFTGKVF*
WSSedA1Ba2DRAFT_1022714	WSSedA1Ba2DRAFT_10227141	F059696	CRGALSSGAFCHYLSCPAAVATAGEEIAAAHAGGRPQRDSMRIDSRSI*
WSSedA1Ba2DRAFT_1024262	WSSedA1Ba2DRAFT_10242621	F070832	LARNANTDGWGNKLVTIFAHYLDSFIVIYNLILIFQIRDFGSGQILQPRQLYLSPGFAKIAPWWLARRDNFSAKVPGLESADGATNVYSLNRRAVSGHL*
WSSedA1Ba2DRAFT_1024741	WSSedA1Ba2DRAFT_10247412	F055831	MQMIAELKTLLLEILESAFHNGDVHATQQLGVNMSNAVKREGVVIIQNQNVEVLARIMPSMVKTLKLCDAMESSWRSQAEITIDPQRPAASAARGGR*
WSSedA1Ba2DRAFT_1025377	WSSedA1Ba2DRAFT_10253771	F101438	MLRQIFSVCLLMLGFAPVWAENVTPVGLEKQAARFEQLLDLRHNVDLVRHPQQALDLADAMSDPEFLVAAMVMSANPEVWLKAMERAGAPGVPQNLAQTANPDMLADWFYSSIDPRFQQAILSRMLDPKKSQRWMQAMSDPRFCMPALAVVSPDTPMQWMKVTSDGRMIQSMQTWFDPKTYLNWMRLPAP
WSSedA1Ba2DRAFT_1026630	WSSedA1Ba2DRAFT_10266301	F093372	FVVIGLILAGGCVAKTNKNTENITTAATFSPRSDVSDHGLNTTANVTDNSTSKLKGSLRVSIGGILYPANLSVVLDNETVGTVTPSTPLYLMVPEGNHTVIVCVSPVCEQEQVTTRFGRYVSVDFSEQLLKDVKFPNPNAEPTARILDCYKNGDEISVNVEFVNPSPKDLRMSVIISVGYSYIDDRTNIKMGDSAKGVLVQDVRAGERITNLLTLSFASGHSFTYN
WSSedA1Ba2DRAFT_1027274	WSSedA1Ba2DRAFT_10272741	F068995	VHQGKPTIERRIGMKAEKKIKFVKAIHPSQPEWEYYLPKEDKALIKKLSKKPIFPKLCDRPCTSIITLFPKDTVGGHTGKGYYMINIDGYRMINAYVISDPLNSTNQRGFTLELSFALNDFVYGVGVVGETSYFFNFDSYFEPGTVSHKLQRCETNDLSTTGGLPLIGGVDLTHILRIPVMGPYVRASVFNEDGIAKKAEVKAYLTT*
WSSedA1Ba2DRAFT_1028982	WSSedA1Ba2DRAFT_10289821	F034230	MRKNLLVFMFAGVFLIGIAAAAQVAEAGPENDKLKVKVGPFFIQESEKKINLEGTASHVVRKGKRINVTVTVENYGKEKSEPVRLKYVETGKKAGEPRFYRIQAIEPGKKWERTFMARFDESGRKSVTATLLTLENQPLADEKGK
WSSedA1Ba2DRAFT_1030645	WSSedA1Ba2DRAFT_10306451	F054975	LTKQLFSIFDNKKKFFLISEDELKKFQHYVFDGLSVFDHPDARNLFHDVGSRQAQNDVRSWQLVCKYCPINLRCEVLIEDTSKCAIFNKLTVRNYTLHAMEEIQFQRQRLHEILDGMKNGGTCDNNCELCILCDNAGHCVAEKAMRLLRESKIEDPSGTVCVA*
WSSedA1Ba2DRAFT_1032015	WSSedA1Ba2DRAFT_10320152	F094063	MIHEFLEPGLGGVVSLEPQPFLHGCKAAPKSQWVTVKALWYGPSDWLMGLRLLRGRFEGKGAMARRSPFPVACSAQTTPPVLGSTRIWLRPKACIRSLS*
WSSedA1Ba2DRAFT_1033723	WSSedA1Ba2DRAFT_10337232	F097608	LAATKRKYETRMSNIEQGISNDEVKPVFPSTFDIRYSIFCGSLLNFNAACEEILV*
WSSedA1Ba2DRAFT_1035220	WSSedA1Ba2DRAFT_10352201	F081500	MGPRREASQAPRHRGVPGPEGLLDLEEKAQEEQERLIHALTGTLHHFFGGFPPSIRPRYRSPGSPQDYL
WSSedA1Ba2DRAFT_1036530	WSSedA1Ba2DRAFT_10365302	F102634	SITQEWETHTMETTIKKRIDIKGHGMVDGEFIQNEHGWFCREVNGIRWNFREWGAPAEMETPEEAAIYLLSLNVDDAES*
WSSedA1Ba2DRAFT_1037599	WSSedA1Ba2DRAFT_10375991	F056119	RHWGCPIRERWGLRAHQQMSPALEEKVAFTATLVGSYEAAEQVAGKWGCPVDDSVIHALVQRVGRGAQAQIEQRLKEPAQERDPQRGASELALLMLDGWFARFRGPGWGKKRTKRDRVEWHEVKNGVFYLHEQAARTEGGRGLIADKVVVRCLGQPMELGQRLHWEAVHGGLGRAKNKLVLGDGIAWIWN
WSSedA1Ba2DRAFT_1037755	WSSedA1Ba2DRAFT_10377551	F062885	NLSTLREVPQANLGTSSACEVEVGPLRFKVWHKSPTYLCLLAGQDPSTLPEFREGETLTMAFHDSGSVLPAEHLKTAVRKIKRNEEGKLKGQYLVDLEILKSYH*
WSSedA1Ba2DRAFT_1038240	WSSedA1Ba2DRAFT_10382402	F061012	MQAEYEMKVQVIRSQGRAARLFVNIPMPLAAALDLQA
WSSedA1Ba2DRAFT_1038551	WSSedA1Ba2DRAFT_10385512	F042655	MKVFELIIPKDDMDHINKEIKKPKRQNTELLELWLERELKIENEGLYGNLPIDESHVTVQLLPNGNYKVLISDACFNMIASHVQPEPHSHKINNEDIFHFWLDMKTN
WSSedA1Ba2DRAFT_1038918	WSSedA1Ba2DRAFT_10389181	F019677	SVPLKLLVSKSLKGNYEITSTYSTLDVSRILGIEKSRVRNWIVKGFIIPSWHLAMARGDKNLLTYDDLCSVYLFQQLLSKGLHRTPIAFIISEIAKTGLGNNLKYGFRYVIWNTKYPKEGGMVTILKKIPNSMIDTSAQMLVLDLLEVKNEVDRKREKRGG*
WSSedA1Ba2DRAFT_1041412	WSSedA1Ba2DRAFT_10414121	F068995	EFVKAIHPSQPEWEYYLPKEDKALIKKLSKKPIFPKLCERPCTSVITLFPKDTVEGNTGKGYHMINIDGYRMINAYVISDPLNSTNQRGFTLELSFSLNNFVYGVGVIGETSYFFNFDSYFEPGTVSHKLQRCETNDLTTTGGLPLIGGVDLTHILRIPVMGPYVRASVFNEDGTARKAE
WSSedA1Ba2DRAFT_1042333	WSSedA1Ba2DRAFT_10423332	F100290	AKEGVKKAGDELGKLGQSVKKGTVTSGDELNKTYGKVDHALAKAWHTTADEAKKAGKDSSDALKKAGASLEGAAKWSGNQLTEGAQASVEAVKKAGKGTAKGVKAGTEEVNKWFKGIGDGIEDLGRKF*
WSSedA1Ba2DRAFT_1042614	WSSedA1Ba2DRAFT_10426142	F071793	MENRKSNRHITDQSIVGTVFTSHNFNDKFYGKMKNYCDLGLYAEFQTCLKDGTVLLVRTTSGAPERLPAKIEEGFRSVSLVEVKWSKPLSANGAVCYGTGLKHLSIX*
WSSedA1Ba2DRAFT_1043595	WSSedA1Ba2DRAFT_10435951	F054136	KVQAQTKVYLFAGAAFLWHGMKDATMDIDVCCSYEEADRIVHALRAFGRMEYVTGINEIRFIRIFLKPFTLQIFIQEVWMGDEYQLLESARCESLIFGGVTFLIPDIKTLIMIKDRQIQALYNEWKKLKGETCI*
WSSedA1Ba2DRAFT_1044291	WSSedA1Ba2DRAFT_10442912	F056714	AVPLFAFAATLQNADSQAYNLQIQEFGRPYSSQYQVIENAQVDICFNGCEMTLLSTGQTVRVNPNDAVVIDNGVMNVTSGN*
WSSedA1Ba2DRAFT_1045151	WSSedA1Ba2DRAFT_10451511	F059696	PAAVEVAGEEIAAAHADGRPQRDSMRIDRIAQFRFQ*
WSSedA1Ba2DRAFT_1046000	WSSedA1Ba2DRAFT_10460001	F071280	MTDTAKAVERVIGFDSHPDSFTATMLRGPTPAAAIVEKVFNQVPMAQLARWAQKHTTDQDLIVLEASGNSFQVVR
WSSedA1Ba2DRAFT_1048702	WSSedA1Ba2DRAFT_10487021	F097602	TILPSEGPSALGRCNCDTLSPKRNSNVDVMNRGSADEAVVIVKFGADEFMVTWRRVKHRISDRRLEVKGGTCKRPWPLIKDRRTEISLTGAVDYSRRKQ*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000310: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences