Sample 3300000309

Overview

Basic Information
IMG/M Taxon OID	3300000309 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063443 \| Gp0052056 \| Ga0026059
Sample Name	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	208340005
Sequencing Scaffolds	72
Novel Protein Genes	73
Associated Families	62

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	3
Not Available	16
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	1
All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus → Dictyoglomus thermophilum	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanolacinia → Methanolacinia petrolearia	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wetland Microbial Communities From Twitchell Island In The Sacramento Delta
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland → Wetland Microbial Communities From Twitchell Island In The Sacramento Delta

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → saline wetland → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline)

Location Information
Location	Twitchell Island in the Sacramento/San Joaquin Delta, CA
Coordinates	Lat. (^o)	38.107057	Long. (^o)	-121.647578	Alt. (m)	N/A	Depth (m)	0 to .12
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002989	Metagenome / Metatranscriptome	515	Y
F005331	Metagenome / Metatranscriptome	404	Y
F007558	Metagenome / Metatranscriptome	349	Y
F008090	Metagenome / Metatranscriptome	339	Y
F016481	Metagenome / Metatranscriptome	247	Y
F018024	Metagenome / Metatranscriptome	237	Y
F019578	Metagenome	229	Y
F019677	Metagenome / Metatranscriptome	228	Y
F020200	Metagenome	225	Y
F024002	Metagenome / Metatranscriptome	208	Y
F029425	Metagenome	188	Y
F029719	Metagenome / Metatranscriptome	187	Y
F031716	Metagenome	182	Y
F032391	Metagenome	180	Y
F033858	Metagenome / Metatranscriptome	176	N
F034489	Metagenome / Metatranscriptome	174	Y
F036300	Metagenome	170	Y
F040164	Metagenome / Metatranscriptome	162	Y
F040402	Metagenome / Metatranscriptome	162	Y
F042959	Metagenome / Metatranscriptome	157	N
F045836	Metagenome / Metatranscriptome	152	Y
F047753	Metagenome / Metatranscriptome	149	N
F049734	Metagenome	146	Y
F051083	Metagenome	144	Y
F052015	Metagenome / Metatranscriptome	143	Y
F054975	Metagenome / Metatranscriptome	139	N
F055830	Metagenome / Metatranscriptome	138	Y
F058258	Metagenome	135	N
F059095	Metagenome	134	Y
F059489	Metagenome / Metatranscriptome	134	Y
F059696	Metagenome	133	Y
F060457	Metagenome / Metatranscriptome	133	Y
F060458	Metagenome / Metatranscriptome	133	Y
F062283	Metagenome	131	N
F062885	Metagenome	130	Y
F064855	Metagenome / Metatranscriptome	128	Y
F065905	Metagenome	127	Y
F067458	Metagenome	125	Y
F069001	Metagenome / Metatranscriptome	124	Y
F071376	Metagenome	122	Y
F071378	Metagenome / Metatranscriptome	122	Y
F071793	Metagenome / Metatranscriptome	122	Y
F072483	Metagenome	121	Y
F072484	Metagenome	121	Y
F075046	Metagenome	119	N
F079671	Metagenome / Metatranscriptome	115	Y
F084418	Metagenome	112	Y
F085584	Metagenome	111	Y
F085856	Metagenome	111	Y
F092121	Metagenome / Metatranscriptome	107	N
F092937	Metagenome / Metatranscriptome	107	N
F093371	Metagenome	106	Y
F094061	Metagenome	106	Y
F094847	Metagenome / Metatranscriptome	105	Y
F096728	Metagenome	104	N
F097608	Metagenome	104	Y
F097610	Metagenome	104	N
F098776	Metagenome / Metatranscriptome	103	Y
F099498	Metagenome	103	Y
F101437	Metagenome / Metatranscriptome	102	Y
F102133	Metagenome	102	Y
F102645	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
WSSedA1BaDRAFT_1000099	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	18943	Open in IMG/M
WSSedA1BaDRAFT_1001334	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5133	Open in IMG/M
WSSedA1BaDRAFT_1001635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	4536	Open in IMG/M
WSSedA1BaDRAFT_1002161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	3855	Open in IMG/M
WSSedA1BaDRAFT_1002699	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	3412	Open in IMG/M
WSSedA1BaDRAFT_1002832	All Organisms → cellular organisms → Bacteria	3324	Open in IMG/M
WSSedA1BaDRAFT_1002879	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
WSSedA1BaDRAFT_1002947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3258	Open in IMG/M
WSSedA1BaDRAFT_1003210	All Organisms → cellular organisms → Bacteria	3088	Open in IMG/M
WSSedA1BaDRAFT_1004539	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
WSSedA1BaDRAFT_1005287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	2326	Open in IMG/M
WSSedA1BaDRAFT_1007196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1955	Open in IMG/M
WSSedA1BaDRAFT_1007282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1942	Open in IMG/M
WSSedA1BaDRAFT_1007763	Not Available	1873	Open in IMG/M
WSSedA1BaDRAFT_1008863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1730	Open in IMG/M
WSSedA1BaDRAFT_1009029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1712	Open in IMG/M
WSSedA1BaDRAFT_1009051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1710	Open in IMG/M
WSSedA1BaDRAFT_1009498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1664	Open in IMG/M
WSSedA1BaDRAFT_1010603	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
WSSedA1BaDRAFT_1010661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1554	Open in IMG/M
WSSedA1BaDRAFT_1011603	Not Available	1481	Open in IMG/M
WSSedA1BaDRAFT_1011755	All Organisms → cellular organisms → Archaea → Euryarchaeota	1471	Open in IMG/M
WSSedA1BaDRAFT_1014098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1326	Open in IMG/M
WSSedA1BaDRAFT_1014909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1283	Open in IMG/M
WSSedA1BaDRAFT_1016464	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
WSSedA1BaDRAFT_1016753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1198	Open in IMG/M
WSSedA1BaDRAFT_1017662	Not Available	1162	Open in IMG/M
WSSedA1BaDRAFT_1017827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1157	Open in IMG/M
WSSedA1BaDRAFT_1018287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1139	Open in IMG/M
WSSedA1BaDRAFT_1018299	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1139	Open in IMG/M
WSSedA1BaDRAFT_1018347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1137	Open in IMG/M
WSSedA1BaDRAFT_1018709	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
WSSedA1BaDRAFT_1018813	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
WSSedA1BaDRAFT_1021777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1033	Open in IMG/M
WSSedA1BaDRAFT_1022451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	1015	Open in IMG/M
WSSedA1BaDRAFT_1026456	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
WSSedA1BaDRAFT_1026600	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
WSSedA1BaDRAFT_1029254	Not Available	876	Open in IMG/M
WSSedA1BaDRAFT_1033156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	818	Open in IMG/M
WSSedA1BaDRAFT_1034920	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	797	Open in IMG/M
WSSedA1BaDRAFT_1035747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	788	Open in IMG/M
WSSedA1BaDRAFT_1038468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	759	Open in IMG/M
WSSedA1BaDRAFT_1039095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	753	Open in IMG/M
WSSedA1BaDRAFT_1039555	Not Available	748	Open in IMG/M
WSSedA1BaDRAFT_1040410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	740	Open in IMG/M
WSSedA1BaDRAFT_1040886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	735	Open in IMG/M
WSSedA1BaDRAFT_1041441	Not Available	730	Open in IMG/M
WSSedA1BaDRAFT_1042448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus metallidurans	722	Open in IMG/M
WSSedA1BaDRAFT_1043139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
WSSedA1BaDRAFT_1043263	Not Available	715	Open in IMG/M
WSSedA1BaDRAFT_1045864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	694	Open in IMG/M
WSSedA1BaDRAFT_1046595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
WSSedA1BaDRAFT_1049123	Not Available	671	Open in IMG/M
WSSedA1BaDRAFT_1049913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	666	Open in IMG/M
WSSedA1BaDRAFT_1052583	Not Available	649	Open in IMG/M
WSSedA1BaDRAFT_1054639	Not Available	637	Open in IMG/M
WSSedA1BaDRAFT_1055724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
WSSedA1BaDRAFT_1056436	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
WSSedA1BaDRAFT_1058447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	616	Open in IMG/M
WSSedA1BaDRAFT_1059275	Not Available	612	Open in IMG/M
WSSedA1BaDRAFT_1061393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	602	Open in IMG/M
WSSedA1BaDRAFT_1065249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	584	Open in IMG/M
WSSedA1BaDRAFT_1068060	All Organisms → cellular organisms → Bacteria → Dictyoglomi → Dictyoglomia → Dictyoglomales → Dictyoglomaceae → Dictyoglomus → Dictyoglomus thermophilum	572	Open in IMG/M
WSSedA1BaDRAFT_1070251	Not Available	564	Open in IMG/M
WSSedA1BaDRAFT_1073315	Not Available	552	Open in IMG/M
WSSedA1BaDRAFT_1074026	Not Available	550	Open in IMG/M
WSSedA1BaDRAFT_1077227	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanolacinia → Methanolacinia petrolearia	538	Open in IMG/M
WSSedA1BaDRAFT_1078528	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides	534	Open in IMG/M
WSSedA1BaDRAFT_1080388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	528	Open in IMG/M
WSSedA1BaDRAFT_1080406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	528	Open in IMG/M
WSSedA1BaDRAFT_1082834	Not Available	520	Open in IMG/M
WSSedA1BaDRAFT_1089156	Not Available	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
WSSedA1BaDRAFT_1000099	WSSedA1BaDRAFT_10000992	F036300	VNMDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYNII*
WSSedA1BaDRAFT_1001334	WSSedA1BaDRAFT_10013341	F029425	VTSKKQGTRASADSANYAVPGDETVQVPQNFINSKKVKGIDDVVDYKSVLALAKAIN*
WSSedA1BaDRAFT_1001635	WSSedA1BaDRAFT_10016355	F052015	VPERRSWTFYEVVNEAEQAMAKDGPIEIYMIKKSAEGFIVSFRLGTDQGVTPGMDLVVLNEDGFQVGNVTVLSSTETESEALVAGESGIKLGCRVSLPAAARGV*
WSSedA1BaDRAFT_1002161	WSSedA1BaDRAFT_10021612	F016481	MEGQEEWWKHISEDKKKAFIKAKLEFKIKKVQAKLDFLKELQKIFG*
WSSedA1BaDRAFT_1002699	WSSedA1BaDRAFT_10026993	F067458	MKRLVFAGLIFLVLLQGIWFAAADDSPDYAKIVVVHLTINKSSITEKSVEMRYGHPPNIEARNGDFKGTLKTADGSTIREFNLWDPRYQLGDVLEKNNESSGYLSGYLTYSDXADLVLILPYYENQMTFELYDKKTGTLLKKVNMSQAITKFQSNYPKDPGSISVSPIQFDKSVLYVITGVVISILIIGMILSMVRKK*
WSSedA1BaDRAFT_1002832	WSSedA1BaDRAFT_10028324	F092937	LLFLLVLMLGCVYTEPYRVAVTVEPMVRNCTCLGYISEISDMGAPQINPKFTYDAQERVLRXADMMNATHLVWIGDYPFAATAMIYRCSN*
WSSedA1BaDRAFT_1002879	WSSedA1BaDRAFT_10028792	F085856	MKKIILSCFLLVFASMFISLAEAGEYINNCPVPDNLKIIEPDGNVVPPKLALLSGIWEGNWAASAIFIVEQIREKEAVVVLAWAGATARSQAGTSFAPGFVRLKCPIEQGEDGNYRIICKVQTGTNRLIQTNDPRQIRVVRDGFGTMSPQYRDSMFQKKEVK*
WSSedA1BaDRAFT_1002947	WSSedA1BaDRAFT_10029471	F072484	AGLQADRMRNTLNNRKGWLVFLVTLFGLMWSTSLHAANFLFFWSASTDPSATGYGIYQRTGGSSYVKIDEVSVQDLDNPATPSYLVTGLTDGNTYWFAATSISAFGTESDLSNQTCITVNGQIVECTDNDDNGTTVFISCFISAAGL*
WSSedA1BaDRAFT_1003210	WSSedA1BaDRAFT_10032103	F102133	LKILDSLKTSALFLIAAGLFVMSFVIYDVMGKHGRYVPVSDDDEKVVVMDTHTGEVWSVNYESKETASLKIFNPIAGEPQIFPKKLIARVNK*
WSSedA1BaDRAFT_1004539	WSSedA1BaDRAFT_10045391	F059696	AFCHYLSGYSAVATAGEKIAAAHADGRPQRDSMRIDRIAKFRS*
WSSedA1BaDRAFT_1005287	WSSedA1BaDRAFT_10052874	F055830	MKAMDAHRGKEKIMEMTKWKDTAGHKPGCPYKGVPVSGTAAEMAKYHSGYCPGCNIPVKWEEEKREKENAALQS*
WSSedA1BaDRAFT_1007196	WSSedA1BaDRAFT_10071963	F075046	MEEKESLVVVKDKRKIQEILERMVSKNMELKVLIDEEDVRFMSRAMRLNPEEISSLGSEPELIIEKLFPEMGNNLIQSSSEVTLEFTIKEHFCRGKAKYVGVSNEYPYFGIMITLPNSLELAKERRREKRRIYDIPDFVSVEFRIMGKDKVYELGVMDCSMHGLGILITKKDFELVRLVKPGDRIRDIVLYSESAMIKVDGVVRHLTKMSAGKYRNSYVMGIESPEVIESCKIVSQQENNNS*
WSSedA1BaDRAFT_1007282	WSSedA1BaDRAFT_10072824	F007558	MQAIADLKALLLEILESAFQNGDVHATQQMGVNMSNAVKREGVVIIQNQNVEVLARIMPSMVKTLKLCDAMESSWRSQAAIELEPQQKQLPPSVDYDDTDPIEACCSWLYENHINWQNMQDLMKARYLEYVIGRFKTKTEAAKWLG
WSSedA1BaDRAFT_1007763	WSSedA1BaDRAFT_10077632	F084418	IITVISLTIVMTSMIVYSICRIPSRAYANVCHKSLIFDNLAEARRLEDLLADGDTESVHRILKELQQRGDIDIFESENEIYVSGRRGVSIDQRRTITRDLLVSDYDPVEDFRNLSVMSRFNTDAQTMNANEGVCVIKYEAVSATNHEESKDDLFVSEYDIIELLESLNIRSGCNLTVQTPS*
WSSedA1BaDRAFT_1008863	WSSedA1BaDRAFT_10088632	F059696	GAMSSGAFRQYLSGYAAVEAAGEEIAAAHADGRPHRDYRRIDRIAQFG*
WSSedA1BaDRAFT_1009029	WSSedA1BaDRAFT_10090292	F062283	MRQSVIFLVALTFAGPLAVFAATLENTDSQEYELQIMEEGRPYGRYYGTYGDEYRILEHCKTDICHYGCEMTLVSTGQKVWVSPRDEVVISYRVIKVNRAANDRRGGY*
WSSedA1BaDRAFT_1009051	WSSedA1BaDRAFT_10090513	F031716	MSRFTPGPWLVKEENGSYGVFSNDALLAITLFDDIQDKDAAKANAQLMASAPRLLEVIKEIKEHLDNNMIVTEEGLKINDSHLRKSIIDAILRAEGYRL*
WSSedA1BaDRAFT_1009498	WSSedA1BaDRAFT_10094983	F062885	MNLSTLREVPQANLGTSSACEVEVGPLRFKVWHKSPTYLCLLAGQDPSTLLEFREGETLTMAYHDAGSVLPAEHLKTAVRKIKRNEGGKLKGQYLVDLEILKSYH*
WSSedA1BaDRAFT_1010603	WSSedA1BaDRAFT_10106031	F040402	MTKYMTKTFTSFNLAVAVAVAILISACSIANLGWLRNSEDVGRAFATLQVSPNYRYWYLYLENSPYAVVGLNREYRIEDISWTEVEPGSEVFGKVVGLVESFPVPGSRTYGAYILDSKGERIGVWYSSMGAGITVDPDSKVVSITTGTPWMHGDGKDSYD*
WSSedA1BaDRAFT_1010661	WSSedA1BaDRAFT_10106612	F060458	MTARQEVYKNGIGLVCRYSGIQMRLEAVVRKIASLQEFIAKSCSEAAVATAACRKKSGPQCVFDIIHESEKGVDPLFIKQVTGFKEQKIAKILYKLFKYGEIRIEPGGLYVAVAGR*
WSSedA1BaDRAFT_1011603	WSSedA1BaDRAFT_10116032	F033858	MSEAGSVEKIESLRKIRLSATMLEVGFKSENLSEMIQCQIELEELAARLQAEQGDLVTPQQCEAAKKNLDAFVALVDQAIEKAALNQGITPGSPKPKPTTLE*
WSSedA1BaDRAFT_1011603	WSSedA1BaDRAFT_10116033	F058258	DQGEYQSYRYGFIVRLPDNGWLMTKTVPESFAAYLVPEAPDRVLLLLHKSQTRGLIAVRGGTLYLSYENALTLQERLTELIEPFLDLDWTQLVRELPESRGSYRLGHWDASGLQWQERSESRPLAGIKHTAMGYYYPLQGETCYVTFYLFSEPDTFDDNVKALHRMAETFSSGEVFTSRAYGW*
WSSedA1BaDRAFT_1011755	WSSedA1BaDRAFT_10117552	F054975	LTKQLFSIFDNKKKFFLISEDELKKFQHYVFDGLSVFDHPDARNLFHDVGSRQAQNDVRSWQLVCKYCPMNLRCEVLIEDTSKCAIFNKLTIRNYTLHAMEEIQFQRQRLHEILAGLKNGGTCDNHCELCILCDNAGHCVAEEAMRLLRESKIEDPSGTVCVA*
WSSedA1BaDRAFT_1014098	WSSedA1BaDRAFT_10140985	F097608	ENRMSNVEQGISNDKVNSLLFFPSAFVIRYSIFCGSFLNWYAACEEVFVQDS*
WSSedA1BaDRAFT_1014909	WSSedA1BaDRAFT_10149092	F060457	MNKNITDPKSSSSDLGIFLSTIFHIASIACVPFLVHATVNGNLYACGLLMAWTIYYSIRLFRSRKLLGLAFFVMTLSAVVFGIYNFGLMSQYKNSKIYLEEEKTFCRETTYETLKLKYETEKSMISTNFRICLDKQHVPPETCITEVNQATSLNEVMLGNRLLRLSNCVNSLTTKEKSVDRLTHHPWVKFWLGFL*
WSSedA1BaDRAFT_1016464	WSSedA1BaDRAFT_10164642	F093371	MVIIKRERKWRAAGVLAVALSAFLFAGCFATVGSHMNGQPVDMARAMAGDAGSQKWNTYRFETVGPLAEQRIAYVLFGDDVAMDMWHTPFVNLGKMSLREVLGNHDAYLKERMWIGTPITFQEYRWGGKVIAYTANESQMEVDLWEMAAAGSKXDIRMIYIDRRSFSGGGGPLADPGSR*
WSSedA1BaDRAFT_1016753	WSSedA1BaDRAFT_10167531	F019578	MEDPYTQTNSSFSIPHHRVNLALKFGSRIADNPYMEKSANGSWYVKKKDEAIGIVGADSSVVAVLPKKKTGEDTRIAEAYLFAAAPQLFDVCRIIHSILENSLIVTPEGFKINCSDLKVSLSDAILRAKGYRKSPDEP*
WSSedA1BaDRAFT_1017662	WSSedA1BaDRAFT_10176622	F097610	MDAEEIDDLITNYSEFEKKIDDKIQAYQKLKDSPDSIATAILIQSMESQKKSNELAERMFHLSRVVVIFAGGALIIATGALTFASLAYFTQGTDKTFWGIVTMSIVSLGVIAILIVFYPRKGKTIPKRKK*
WSSedA1BaDRAFT_1017827	WSSedA1BaDRAFT_10178272	F047753	MMKKIIRILEGLKVDDTWLRVAPFALAGCRKESYGKLTRLCRRKETLMAVVVAGVIGLYSAKKHVELCKKAVKAGRNASGDSDRELNKYLDAIWRVYLLDTSIDKQRLIEKAIGYVSGKLDQELSHSLTEAKKEYRAIIQQIMGAVQAGTGHSENAVHGYLSAFLNSIGCTTLGGKRFTRQNISNLS*
WSSedA1BaDRAFT_1018287	WSSedA1BaDRAFT_10182872	F034489	MGRRNLFAGHLNGSRAAQIVPESPGRQRPTTETADAAGEEVLETPGASAKPG
WSSedA1BaDRAFT_1018299	WSSedA1BaDRAFT_10182992	F101437	MILKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGIAIVLGATISAASGGNGFFLGVNN*
WSSedA1BaDRAFT_1018347	WSSedA1BaDRAFT_10183472	F052015	TTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
WSSedA1BaDRAFT_1018709	WSSedA1BaDRAFT_10187091	F008090	MENKKIVCLFLFVFLILVFSSCHSRSITDIKPAMTK
WSSedA1BaDRAFT_1018813	WSSedA1BaDRAFT_10188131	F024002	ALILMAAKDRGSAYLDGAHDPQMVAGQPMGFSILRAVLTENVRNLDAARCSHLLPSLRIFFGLFIKGTRNLGQVKPTDMQIYCGRYRRPVSQKQLDMVEASRFDFQYCLKCSRTV*
WSSedA1BaDRAFT_1021777	WSSedA1BaDRAFT_10217772	F019677	VKSVPLKLLVSKSLKGNYEITSTYSTLDVSRILGIEKSRVRNWIVKGFIIPSWHLAMARGDKNLLTYDDLCSVYLFQQLLSKGLHRTPIAFIISEIAKTGLGNNLKYGFRYVIWNTKYPKEGGMVTILKKIPNSMIDTSAQMLVLDLLEVKNEVDRKREKRGG*
WSSedA1BaDRAFT_1022451	WSSedA1BaDRAFT_10224512	F032391	VVRRQFESYLDKVFGFADLVAALPEGRTHPLHPWRKVFDAVFLGSACQLATTHRIEFESRAGVLSKRIGPLSEDTLGYAMQRQDTQSIFELGCTIAKRLKRNGVLGSQWARGRVVAAVDGIEICSSYVRCCDTCLERKVERKVDGEIRECLQYYHRVSAVTLVSTPFPVFLGIRFQRAGETE
WSSedA1BaDRAFT_1026456	WSSedA1BaDRAFT_10264562	F019677	MITYSTLEASRILGIEKSRVRNWIVKGYIIPSWHKAMARGDKHLLTYDNLCYIYLFQQFRSKGLHRTAIAFIISEIEKTGLSKNLESGFRYVIWNTKNPKEGGIVAISSEIPTAITDTLIVDDREKTGLSKNLESGFRYVIWNTKNPKEGGIVAISSEIPTAITDTLIVDDRRAAPRGSSLMLVIDLLEVKNEVDRKRE
WSSedA1BaDRAFT_1026600	WSSedA1BaDRAFT_10266002	F094061	MREGENDMEVRGRKEFGVAFFKPSLPGDVLTLGAVSIAARMIEDTLCAAVGAALQMTTQGGGAAVKEVGDDPVLIWG*
WSSedA1BaDRAFT_1029254	WSSedA1BaDRAFT_10292541	F064855	KLQVMGEAGGGLPRNSPRNAQLAGAGETLVAFAAPYLQSLSRTLFVFCF*
WSSedA1BaDRAFT_1033156	WSSedA1BaDRAFT_10331562	F019578	MQTPSNVSWRVKKKGEAVGVIAENSSVVAVLPRKKTGEDTRVKEAYLLAAAPLLFDACSKINSVLESSLIVTPEGIKINCTDIKKSLSDALLRALGYRKRPEEP*
WSSedA1BaDRAFT_1034920	WSSedA1BaDRAFT_10349202	F059489	AVDLDTYLSRNSRFKSFVYDRREIRTIADNLGIKTDRVRTELRKLSYCLIKNNNGRMVWKRDVACI*
WSSedA1BaDRAFT_1035747	WSSedA1BaDRAFT_10357471	F094847	MQKDFTVIFSSSDKKAARDGILFPLTAVDSAYATGPIRYVTTNLLEKLGYLGPNAFGGLSISPQVSQLFSAALEIFKRGEQTEKGDYPYVGDVESPTGTHTVWISPNSTRGKHTLYLPEDC*
WSSedA1BaDRAFT_1038468	WSSedA1BaDRAFT_10384682	F020200	MCWVCERLENLIAGWNEEREFKEQISRDDYHRGLSKGFSECIKDLSGVVESMRLKGICEKFPEYNGPFDEKQRWDILNDILKLRDEDSNQE*
WSSedA1BaDRAFT_1039095	WSSedA1BaDRAFT_10390952	F042959	IDLKVLEASEIRIRLKELGPVAEIRLTRANLPLFEEDEFELFLAWGGQRKKYKVPVKDGKALFGILPDSVAPLTDKKPQKGNEGLIREITLAGSGGEATFPMSWGYAVPEEWKPLERVYSLVIEMARRMSGWQVF*
WSSedA1BaDRAFT_1039555	WSSedA1BaDRAFT_10395551	F071376	LNLVGLWTLHFDWGPSGNYHWTRLYFNFDGTFAYLAGANEGSWVQVDDNIICRFKRLPETENNTVYSGIATRNFMSGIMMSFQGQKGHWYAVKKGTKVYSLNNGVNLPYLIEKESKAKFDPVGKEK*
WSSedA1BaDRAFT_1040410	WSSedA1BaDRAFT_10404101	F079671	VFRVAVGAESEKWLEEVAEMFDDRAPLTTEMDEVREQLLDCMKKYIELGDRILAIQQAISPERTREAQKMAAYYSRIQAEQEVLSDLQERWRMMLEEIMEAQDLSRNQTLLDLLLVYNMVNRRELAVSEDGALYEKPLFEESYFTERTGLADEYYHNVLVYALVEFLRAPGNRDKLRRCPDCETFFIEGPRRTASKRCGRCAKRK*
WSSedA1BaDRAFT_1040886	WSSedA1BaDRAFT_10408861	F019677	MITYSTLEASRILGVEKSRVRNWIVKGYIIPSWHKAMARGDKHLLTYDNLCYIYLFQQFRSKGLHRTAIAFIISEIEKTGLSKNLESGFRYVIWNTKNPKEGGIVAISSEIPTAITDTLIVDDRR
WSSedA1BaDRAFT_1041441	WSSedA1BaDRAFT_10414412	F005331	MARFSAQEPTGAAVQQLEVLVRTAVFKSANALVGFLLQQAADSLDATYQAQPGEHWKGRETLQLQGMFGAFP
WSSedA1BaDRAFT_1042448	WSSedA1BaDRAFT_10424481	F051083	MRNQPVVPGSTFKTLFRQVLSYQFIHGLLRACGVRRRRPPRVSAGELICGLVFHAVAGKGTLAEHVKQLTGKDITDGALAQRRALLPQDIFQGMMRVALKAKADPAQHPGAFYHGLRLCGIDGSTFSVTNTPQVKKRMRKARTRRGRAAFPKLGVAVLVELGLHNPLAAALGSDGESEMVLAKQLVPAQPAKSMLISDRYYG
WSSedA1BaDRAFT_1043139	WSSedA1BaDRAFT_10431391	F098776	MSVTYFDFTTPKFFLFRNQAKHLSIPHYHILILAWCALVILYGETGLSPTPGHGEK*
WSSedA1BaDRAFT_1043263	WSSedA1BaDRAFT_10432632	F029719	MANLKKILQSAPXLRNTLPQNVTRGNGVKNPQKAEAYVGKRVLRSGDTISSIKGAITPVPNGPLIKKKGPYAGSTLKKGGKVTVNAGGEKHLVYKKTSPTGVGKGKKGNIMVNHPTKDKGKWDTIDLTKIGRAKTVKQGVASTKKWHKDNPD
WSSedA1BaDRAFT_1045864	WSSedA1BaDRAFT_10458641	F019578	MGKHALGPWHVXKKGEAVGVXGDDSSVVAVFPRKNNSDDTRINEAYLLAAAPLMLEACSKIHSILENSLVVTPEGFKMNISDIQKSLADAIMRAKGYRKTPHEP*
WSSedA1BaDRAFT_1046595	WSSedA1BaDRAFT_10465952	F099498	VLARIMPSMVKTLKLCDAMESSWRSQDVITIDPQRPQLPPPGEEDDTDSVDACCSWLYDNHFKWQDMQDLMKARYLEYVISRFKTKTEAAKWLGVGSTYLCKLSKTTMNN*
WSSedA1BaDRAFT_1049123	WSSedA1BaDRAFT_10491231	F093371	MVQIKGERKRVAACILTVALIALALAGCYTAVGNLMNWQQVDTARALSGDAGNQKWNTYRFQTVGPFEEQRIAYVLFSDDVTMNMRRTPYVDLGKMTLREVQEDHAALLRQRMWIGTALVFREFRRGG
WSSedA1BaDRAFT_1049913	WSSedA1BaDRAFT_10499131	F069001	MKVIFGGRKNEELVSKRPSGIKQQRFCEVCGTYVGALTSKEWDLEGRICKTCVEAYASSLEIEMDAANQSWKVKRHSWEMDAERSRMSRFV*
WSSedA1BaDRAFT_1052583	WSSedA1BaDRAFT_10525832	F071378	MKGGQLMEIKSYTEQEKRALAEISIGIYGKELTLIMLPELKEYLNGSTKRDAFAEMIQHDQAKP*A
WSSedA1BaDRAFT_1054639	WSSedA1BaDRAFT_10546392	F065905	KNKLISLVIFITALLVIFFQTGYRHFYETFPWSVKAYHTVKYPASLGFISPGSQTILMIVTGAVIILIILAYYPKDTQSL*
WSSedA1BaDRAFT_1055724	WSSedA1BaDRAFT_10557241	F002989	MARFQADTPNGVAVQELEVLLRTAVFKSANQVVGYLLQRAANLIEASYQPAPGYHYKGRATLTLDCLFGSF
WSSedA1BaDRAFT_1056436	WSSedA1BaDRAFT_10564362	F059696	LSGPAAVATAGEEIAAAHADGRPQRDSMRVDKLAQFRWY*
WSSedA1BaDRAFT_1058447	WSSedA1BaDRAFT_10584471	F060457	VNGNLYAYGLLMAWTIYYSIRLFRSRRLLGVAFFVVTLSAVVSGIYHFGLMSQYKNAKIYLEEEKNFCGETTYETLLLKYETEKSMISARFRVCLEKQNALPETCITEVNQATSLNEVMLGNRLLRLSNCVNSLTTKEKSVDRLKHHPWVKFWLGFL*
WSSedA1BaDRAFT_1059275	WSSedA1BaDRAFT_10592751	F045836	FLDPIQWLICGICGWSVERLDQAMIAGAAMVSVLYIAMAAFYPDGTLFSFPTPHVGIAILGKAIGAVLMTGLIYWLKQRQLNRKKS*
WSSedA1BaDRAFT_1061393	WSSedA1BaDRAFT_10613931	F019677	MITYSTLEASRILGIEKSRVRNWIVKGYIIPSWHKAMARGDKHLLTYDNLCYIYLFQQFRSKGLHRTAIAFIISEIEKTGLSKNLESGFRYVIWNTNEKTGLSKNLESGFRYVIWNTKNPKEGGIVAISSEIPTAIIDALIVDDRRAAPRGSSQMLVIDLLEVKNEVDRKREKRGG*
WSSedA1BaDRAFT_1065249	WSSedA1BaDRAFT_10652491	F092121	MPKHFYTLLIIPHKKKDSVKKFLATPIHFRVVTAVSVVLFCFFGYCAVDYLTIKLEQMELANLRQLTSTQQEQIDTLQEKISFFDRKLADLKQVDEKIRNMASDLTGKSRKPSRKEEAKSREQVLGI
WSSedA1BaDRAFT_1068060	WSSedA1BaDRAFT_10680601	F102645	NRNVDFWIGKGEDIAALKTQHHIDSSVFMVFTPGEKIFDLGGERIVETFLVRGHSNGGTVYLLKNDKLLFTGDALGSGFGQSFRSVDRLRLVAEDAQKLVDYIKASYAPYDRYTLRVYTGHTWQNVYGGFLYPEKEKVDVGYLDWRFIQDVASCANGIFKGNWLVESSGLSHIGKMAYTDCWPGAAGQAI
WSSedA1BaDRAFT_1070251	WSSedA1BaDRAFT_10702511	F059696	LSGPAAVATAGAEIAAAHADGRPQRVYMHIDRTAQFRWL*
WSSedA1BaDRAFT_1073315	WSSedA1BaDRAFT_10733152	F072483	TSAHPEWNMKGYVSVHRIADGQILANIRKFRIYARLNGFISEGIFNNGQSALDATFALMASLNPPRIDYILDMRFSDPWPSDILKLWKKKALGIFSKYPQVYAVGVTGEDSPFWSQIYDIKVLFQKHGDRILGIFETPEKAEAFLDKLRNFELP*
WSSedA1BaDRAFT_1074026	WSSedA1BaDRAFT_10740261	F096728	KERTKSHQFIGAESIPERELEAGFTQASYIFAVDFQGGKIRKVK*
WSSedA1BaDRAFT_1077227	WSSedA1BaDRAFT_10772271	F049734	MSESKNYGFQTQFTIVKKYHRHVLWLILGLLFALDIFTTSMSLHLGNFEKNPLMIPFAGNPALHGIVKLLAYIFLFFVIERAVIFIQERKPEKTPFWIKLNFQTLYGLIIFVLIYLIWLYLYVVASNILIIS*
WSSedA1BaDRAFT_1078528	WSSedA1BaDRAFT_10785282	F085584	MSKLILSLDDENTSLFSKQYLSLPELHEEIEKRLEDLKTMDKRKKKQLMQAKEDVNFFIDMYNAKAKFKTYN
WSSedA1BaDRAFT_1080388	WSSedA1BaDRAFT_10803881	F071793	MENRNSNRHKTDQSIVCTVFSSHGLNDMSYGKLKNYCDFGMYAELQTCFKXGTILLVRTTSSAPEHLPATIDEGFRSVSLVEVKWSKSLSSNGVVCYGTGLKHLAIL*
WSSedA1BaDRAFT_1080406	WSSedA1BaDRAFT_10804062	F018024	MRIVEGVRLKHKLTGRLYELKTIKDGAFILESKETPYRMWFGERDLEVFFERAGKNKRR*
WSSedA1BaDRAFT_1082834	WSSedA1BaDRAFT_10828341	F040164	MEVEFALDETDLVALARHHMEHSPAIRRRYRIRWIGASLGIGFMGVLLYAFLSLKAPALYLGAFAAFFLVFYPYYYRWLVGRTMRKIVTARLNPEVFAARTLRAAPEGLELVSAGSKTTKTWDRVSGIEVTPDRAFVAIDGEY
WSSedA1BaDRAFT_1089156	WSSedA1BaDRAFT_10891561	F059095	RYLKIQKVNLESFQEDFDLGQNNSFDSVSAKIKSVYPAINIKVQSFTKGTDKVNQIRSLLEEQKPCLISLSLGNGQGWHIMPVVNIDDISLQLIHHADLDGHCTWVFPVAEIVWRHDYLQGGHDISWIEPA*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000309: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences