Sample 3300000251

3300000251: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m

Overview

Basic Information
IMG/M Taxon OID	3300000251 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0053648 \| Ga0026503
Sample Name	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	97916811
Sequencing Scaffolds	61
Novel Protein Genes	68
Associated Families	64

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1
Not Available	39
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2
All Organisms → Viruses	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon	2
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine aphotic zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	P16, Pacific Ocean
Coordinates	Lat. (^o)	49.283333	Long. (^o)	-134.666667	Alt. (m)	N/A	Depth (m)	500
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000245	Metagenome / Metatranscriptome	1468	Y
F000615	Metagenome / Metatranscriptome	984	Y
F001620	Metagenome / Metatranscriptome	662	Y
F001930	Metagenome	615	Y
F002006	Metagenome / Metatranscriptome	605	Y
F002715	Metagenome / Metatranscriptome	535	Y
F003373	Metagenome / Metatranscriptome	491	Y
F004642	Metagenome / Metatranscriptome	429	Y
F005336	Metagenome / Metatranscriptome	404	Y
F005571	Metagenome / Metatranscriptome	396	Y
F005948	Metagenome / Metatranscriptome	385	Y
F007585	Metagenome / Metatranscriptome	348	Y
F008625	Metagenome / Metatranscriptome	330	Y
F012354	Metagenome	281	Y
F012465	Metagenome / Metatranscriptome	280	Y
F013190	Metagenome / Metatranscriptome	273	Y
F013191	Metagenome / Metatranscriptome	273	N
F014192	Metagenome	265	Y
F014899	Metagenome / Metatranscriptome	259	Y
F015025	Metagenome / Metatranscriptome	258	Y
F016284	Metagenome / Metatranscriptome	248	Y
F016736	Metagenome / Metatranscriptome	245	Y
F018265	Metagenome / Metatranscriptome	236	Y
F018452	Metagenome	235	Y
F020717	Metagenome / Metatranscriptome	222	Y
F023211	Metagenome / Metatranscriptome	211	Y
F025055	Metagenome	203	Y
F026395	Metagenome / Metatranscriptome	198	Y
F027203	Metagenome	195	Y
F029236	Metagenome / Metatranscriptome	189	Y
F029786	Metagenome / Metatranscriptome	187	Y
F030806	Metagenome	184	N
F031254	Metagenome / Metatranscriptome	183	Y
F031898	Metagenome	181	Y
F032036	Metagenome / Metatranscriptome	181	N
F038276	Metagenome	166	N
F038427	Metagenome	166	Y
F040325	Metagenome / Metatranscriptome	162	Y
F043979	Metagenome	155	N
F044547	Metagenome	154	Y
F049215	Metagenome / Metatranscriptome	147	N
F049705	Metagenome / Metatranscriptome	146	N
F049927	Metagenome	146	Y
F051977	Metagenome / Metatranscriptome	143	Y
F052632	Metagenome / Metatranscriptome	142	Y
F052659	Metagenome / Metatranscriptome	142	N
F062832	Metagenome / Metatranscriptome	130	N
F064081	Metagenome	129	Y
F064803	Metagenome	128	Y
F066850	Metagenome	126	Y
F072760	Metagenome	121	N
F072857	Metagenome	121	N
F073662	Metagenome	120	Y
F078811	Metagenome / Metatranscriptome	116	N
F080484	Metagenome	115	N
F082813	Metagenome	113	Y
F092225	Metagenome	107	N
F092360	Metagenome / Metatranscriptome	107	Y
F097505	Metagenome / Metatranscriptome	104	N
F098673	Metagenome	103	Y
F099428	Metagenome	103	Y
F101337	Metagenome	102	N
F105371	Metagenome	100	N
F105494	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
LPjun08P16500mDRAFT_1001424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4675	Open in IMG/M
LPjun08P16500mDRAFT_1001452	Not Available	4637	Open in IMG/M
LPjun08P16500mDRAFT_1001759	Not Available	4124	Open in IMG/M
LPjun08P16500mDRAFT_1002725	All Organisms → Viruses → Predicted Viral	3096	Open in IMG/M
LPjun08P16500mDRAFT_1003599	Not Available	2582	Open in IMG/M
LPjun08P16500mDRAFT_1004844	Not Available	2108	Open in IMG/M
LPjun08P16500mDRAFT_1005129	All Organisms → Viruses → Predicted Viral	2036	Open in IMG/M
LPjun08P16500mDRAFT_1008009	Not Available	1478	Open in IMG/M
LPjun08P16500mDRAFT_1008762	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
LPjun08P16500mDRAFT_1008849	Not Available	1371	Open in IMG/M
LPjun08P16500mDRAFT_1009684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1287	Open in IMG/M
LPjun08P16500mDRAFT_1009929	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1263	Open in IMG/M
LPjun08P16500mDRAFT_1010341	Not Available	1226	Open in IMG/M
LPjun08P16500mDRAFT_1010621	Not Available	1201	Open in IMG/M
LPjun08P16500mDRAFT_1010739	Not Available	1191	Open in IMG/M
LPjun08P16500mDRAFT_1011443	Not Available	1137	Open in IMG/M
LPjun08P16500mDRAFT_1011670	Not Available	1122	Open in IMG/M
LPjun08P16500mDRAFT_1012892	All Organisms → Viruses	1043	Open in IMG/M
LPjun08P16500mDRAFT_1014409	Not Available	958	Open in IMG/M
LPjun08P16500mDRAFT_1015604	Not Available	907	Open in IMG/M
LPjun08P16500mDRAFT_1016339	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	877	Open in IMG/M
LPjun08P16500mDRAFT_1016741	All Organisms → Viruses	862	Open in IMG/M
LPjun08P16500mDRAFT_1017373	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	841	Open in IMG/M
LPjun08P16500mDRAFT_1019395	Not Available	780	Open in IMG/M
LPjun08P16500mDRAFT_1019922	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon	765	Open in IMG/M
LPjun08P16500mDRAFT_1020254	Not Available	757	Open in IMG/M
LPjun08P16500mDRAFT_1021685	Not Available	723	Open in IMG/M
LPjun08P16500mDRAFT_1022466	Not Available	706	Open in IMG/M
LPjun08P16500mDRAFT_1023381	Not Available	688	Open in IMG/M
LPjun08P16500mDRAFT_1023558	Not Available	685	Open in IMG/M
LPjun08P16500mDRAFT_1023719	Not Available	682	Open in IMG/M
LPjun08P16500mDRAFT_1024151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	674	Open in IMG/M
LPjun08P16500mDRAFT_1024211	Not Available	673	Open in IMG/M
LPjun08P16500mDRAFT_1025139	Not Available	657	Open in IMG/M
LPjun08P16500mDRAFT_1026461	Not Available	636	Open in IMG/M
LPjun08P16500mDRAFT_1026958	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	628	Open in IMG/M
LPjun08P16500mDRAFT_1028671	Not Available	605	Open in IMG/M
LPjun08P16500mDRAFT_1028749	Not Available	604	Open in IMG/M
LPjun08P16500mDRAFT_1029229	Not Available	598	Open in IMG/M
LPjun08P16500mDRAFT_1031241	Not Available	574	Open in IMG/M
LPjun08P16500mDRAFT_1031979	Not Available	567	Open in IMG/M
LPjun08P16500mDRAFT_1032000	All Organisms → cellular organisms → Archaea	567	Open in IMG/M
LPjun08P16500mDRAFT_1032332	Not Available	563	Open in IMG/M
LPjun08P16500mDRAFT_1032333	Not Available	563	Open in IMG/M
LPjun08P16500mDRAFT_1032455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	562	Open in IMG/M
LPjun08P16500mDRAFT_1032465	Not Available	562	Open in IMG/M
LPjun08P16500mDRAFT_1033021	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	556	Open in IMG/M
LPjun08P16500mDRAFT_1033089	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	556	Open in IMG/M
LPjun08P16500mDRAFT_1033253	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
LPjun08P16500mDRAFT_1033286	Not Available	554	Open in IMG/M
LPjun08P16500mDRAFT_1033294	Not Available	554	Open in IMG/M
LPjun08P16500mDRAFT_1033997	Not Available	547	Open in IMG/M
LPjun08P16500mDRAFT_1034042	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	547	Open in IMG/M
LPjun08P16500mDRAFT_1034697	Not Available	540	Open in IMG/M
LPjun08P16500mDRAFT_1034836	Not Available	539	Open in IMG/M
LPjun08P16500mDRAFT_1034945	Not Available	538	Open in IMG/M
LPjun08P16500mDRAFT_1035011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
LPjun08P16500mDRAFT_1035042	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	537	Open in IMG/M
LPjun08P16500mDRAFT_1035818	Not Available	531	Open in IMG/M
LPjun08P16500mDRAFT_1037523	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon	517	Open in IMG/M
LPjun08P16500mDRAFT_1039211	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
LPjun08P16500mDRAFT_1001424	LPjun08P16500mDRAFT_10014247	F001620	MDAATLVTIITMFIVTDTSSEFVKYDGLMXCLKDKRKIEKLHDGRRVXCGPSMAEIDKDGNIISIKNKMPDQSGSLKXGGTAKSLTEKKKKKKIKVLTQD*
LPjun08P16500mDRAFT_1001452	LPjun08P16500mDRAFT_10014527	F002006	MPEELQTVKLQVGLLQQEVGARGRQIDALLTKLDSTADKIVDLTVEIKSLNSRQERHSKVDDEIRSELKLVHSRVGTVHDEIGNSERRVSDSIHKLEERVRAVEQYKSKLMTQYIN*
LPjun08P16500mDRAFT_1001759	LPjun08P16500mDRAFT_100175911	F092225	MTLILNQEKQMSKITVSLLLLVLLNACGMTAPAFLATSTGAYSEYKVMSIIKTGTDFTLSLAKLPTTNDMVLSRITGYECKVSRALKQGIEYICRDVKIHPPENGKINIDKKKE*
LPjun08P16500mDRAFT_1002725	LPjun08P16500mDRAFT_10027254	F025055	MSYFRNSAGDKKIVKATYSDSQMIEVLGXTVKKIFNYEXEDXIXFLKNEVFWLNYLKSKWVPELLEVGKNYVITRYYGPDLTKVHHLSRPNDLANQTLEMYRFFKDKNVFKLNGALRNMTLNKGQLVAFDFKHARFRTNKYIDYEIVSYEKWLSKIDNELVEKLKLLI*
LPjun08P16500mDRAFT_1003599	LPjun08P16500mDRAFT_10035992	F049215	VRWLLITCVAYLVSCTEPMKYVTRELTIWNKYVSNGYDNYDDEIEVNLKLGSRDWFWLYDSGDRVKIYNNSSYTWQFEFSEDFDSLYVHARFYYTKDLIIELVVADTALRMDSDKTLMFWNCGDTTVVEYPFPACFTEVDSL*
LPjun08P16500mDRAFT_1004061	LPjun08P16500mDRAFT_10040611	F027203	PKIPEARIVGLSRVNVPIEVERLVFTLNSLIIFSYNS*
LPjun08P16500mDRAFT_1004844	LPjun08P16500mDRAFT_10048441	F038276	MNLDFLLRLTNYVNIGIGTNHLAVIKQFLTVLVIVNHACVLLHGNHNYKDVFYDRLSNQYIRNACDFHNLHISCNNLELVLEKFLLNIKIINNKV*
LPjun08P16500mDRAFT_1005129	LPjun08P16500mDRAFT_10051292	F018265	MSMEMHTLRAVKLTQNIFAINRVNRELVIVRKIVEDLEQRKMELMSS*
LPjun08P16500mDRAFT_1005129	LPjun08P16500mDRAFT_10051297	F000615	MCRIRCFYECSDGEMGFAEMVVSYEEDIAGLIRHWGTGGRMVITEHIDLV*
LPjun08P16500mDRAFT_1008009	LPjun08P16500mDRAFT_10080092	F052659	MLLNENPGTETRIAVFIDGGLISSIPELNYQTIGKLLQGGVPDKVSWMKPSLRGKLRLVKTQGQERNLTIEDLNQS
LPjun08P16500mDRAFT_1008762	LPjun08P16500mDRAFT_10087622	F001930	MQSFQQHLKQHLKEGVAWQQSTSKMIFDFGQTGNMKIPLSSKMMTWIFNVQLPRVTVFHVTNGVGLGNLKKLQNKKKSISAFFNMNADYIDQGIKTEGGVVAELDANILMSSKNDILSMPDKAGRRWVELHNIDTDEKMHPEFEKMVIDLAIKHDPRNKEYLKTVPEIGIGVWYKLQTDLLTKFDPAKAGKKMSLVIADYIDGVAAILKKHKNDIQGKVHGYIVRRGTLAVKHPSGRMVGGDSELSEWNAWDEQVVNEIKIEKIHTFNTAKREADWVKDSVIPRLGRIPH
LPjun08P16500mDRAFT_1008849	LPjun08P16500mDRAFT_10088493	F005948	MVELNHNVVSINSNTLIKGSHGVXVNVYVSKVGSGSDKVEFRNGTTGSSPIECTFYTAAQGTYVGINRRFEAGIYAKCTGSAEITVVFK*
LPjun08P16500mDRAFT_1009684	LPjun08P16500mDRAFT_10096843	F049927	LRPILPIIFAAKIVKIAVPTTAKAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
LPjun08P16500mDRAFT_1009929	LPjun08P16500mDRAFT_10099294	F012354	LLTLPVCVIASSMIYPSAKTPKPIPIAKKAIVSLNSVGLPVFLNPIYEITPIMIPTQKPIKFRIISNKNSNVANLLAVLNKV*
LPjun08P16500mDRAFT_1010341	LPjun08P16500mDRAFT_10103413	F025055	MSYFRNSAGDKKIIKATYSDSQMIEVLGDTVKKIFNYEGEDNFAFLKNEVFWLNYLKSKWVPELLEVGKNYVITSYYGPDLSKVHHLSRPKDLANQTLEMYRFFKDKNVFKLNGALRNMTLNKGQLVAFDFKHARFRTNKYKDYEIYSYEKWISKIDIELVEKLKLLI*
LPjun08P16500mDRAFT_1010621	LPjun08P16500mDRAFT_10106212	F004642	MNXPAFSETXPNELRELGYVPPIIKSYDNNGINVWLDSRRKIYDVPFWQFTMDGIQWMVLDERHGSASQFYSHYKLAKGHVICTGLGFGTREQWLASKPEVTKITVLEKFKEVIDYHKDIGTKWHDKIEIINCDANDYKGSCDFLSIDHYEYDNVLRILDSIKTVCNNITCESAWFWMLEPWIRLGYITDNTENPTIIPMKIRYGGKENDILENYSKIKTYFEHVNLPNLNKEQLTKFIEMY*
LPjun08P16500mDRAFT_1010739	LPjun08P16500mDRAFT_10107392	F097505	MDWKRAKKRMHCDCSIHDIVSSVLEYFIITPMFATAYLAVTVPWMLFVIKLDGEQFTDFVWQSVLVDLIVAYPVTKLILKLKPRIEKITSLRH*
LPjun08P16500mDRAFT_1010739	LPjun08P16500mDRAFT_10107394	F051977	RIYNKIDKEVMHSAPILDIFMKEDKKLWVVTKITKNKERPQLGRSIVHFINGTVFEYSDGKERPILKNSIVFDSKKGRVEFFPKKLRDPELWIKVDRFYGMPPNKKVVLDQSKRFYDVSRDRINFIVKNKDGL*
LPjun08P16500mDRAFT_1011443	LPjun08P16500mDRAFT_10114432	F105371	MKKIEFKFGRKVVKTFDNMDDTNILLRKLLAIRNDDSAWEVGEYTMGNNIEIGLIAAFKIEELLEKVVDVFDSFSIWVNGNNVRXVWSKGF*
LPjun08P16500mDRAFT_1011670	LPjun08P16500mDRAFT_10116703	F012465	KVEEVIRSEKPLKEDVVDQLRSVVKKKKESEIKFKSGTSVPIDPESAKTILKTFDTLNSSNKKKMQDNMNKDTKSFLKILDFAFSNAK*
LPjun08P16500mDRAFT_1012892	LPjun08P16500mDRAFT_10128921	F029786	REKRSRGIRPEIGKDEEPWVSVGIEVKDEDFLKIAQEAHARDITFNKMINIILKTGIKDAEYKFEHDSRPQLLNEIGEPFKS*
LPjun08P16500mDRAFT_1014409	LPjun08P16500mDRAFT_10144091	F020717	MTRKQSEIFEISIVAFTRFLALLETTQCWDFLRPHHILHENKDIRCFXDLNEQKDISISALKLMLSEX*
LPjun08P16500mDRAFT_1015604	LPjun08P16500mDRAFT_10156041	F029236	MGLNRSFLSSDHATSCIDHMEMKDNSDFMNDAKKMIEEWLASSQAWFELESARLRLEAETMVWEAENNVFSLEAGC
LPjun08P16500mDRAFT_1016339	LPjun08P16500mDRAFT_10163393	F013190	LYFSNAELGQEISISATCDGSIPLNEMPSTVASKVASSTNVDIAEIMAFHSSDVFVLAENSNLIK*
LPjun08P16500mDRAFT_1016741	LPjun08P16500mDRAFT_10167413	F005571	MIKSLEERIVNLTKVTTDNVETTVEAELRQLEMKGGVPIQVSVVLAKEENFQFTMDWNSTMSKFSTTLDGIKWYSDFDYSLYSPK
LPjun08P16500mDRAFT_1017373	LPjun08P16500mDRAFT_10173732	F018452	GNSTITYQTMNPYDVTRDVRMWYQITCVYNGGPVGYYKTSTRSETEAQLVQNIKASFKFYQTNLRTGKVHEIDWHHVQMSNKEDYLGFIQGVGYEGDREADTRFGAFCDGAANAYVFEGNWAGTWVTNTALSHSDIQGDTSETKASQPFRVNGFAMDPLGWATKNNXDATNTWIWSPSHHPDRLEDTSENKKDPYPNITSGAADSNYLKATASMDDEDYFQTQADNSYWANNYPLDTA*
LPjun08P16500mDRAFT_1019395	LPjun08P16500mDRAFT_10193954	F043979	MALTISTSDWTSANVRKTLSVQAALVSKLRIYSIKVTFGASDAYATNGVSADLKEGRISTLVAVSPTYTDSKLVVQYDKTNEKIKCFT
LPjun08P16500mDRAFT_1019922	LPjun08P16500mDRAFT_10199223	F044547	LTQAKMDGNIPDRNTKSEINSLLNIVKSINDLNSKITISEEKRYTKEGDIENIFRQIKSQRTE*
LPjun08P16500mDRAFT_1020254	LPjun08P16500mDRAFT_10202542	F062832	AGTTGSDNDVGADITVPAQPYPQGHQAGLDDDRQNENAPAGDSAPSMQEKPLHKSGLVSKSQHTFTTETPRPGAAIEKAGESQTDFSPILKDARQEGYEGLSQVARNILKGKYYTPTQDEVAGF*
LPjun08P16500mDRAFT_1021685	LPjun08P16500mDRAFT_10216851	F082813	MRLYFNANNKATLEALEQCGVKNVMLSHRYSYANINKFHDRFESIFVVAGTKGDPEKYHDFLKKKREYYEYATQFDVYFDMDATLKYWKXEQEMGIDWTVPVLQGNFGHHLAQLRPEPNSLVCLGEIKGVAELEDQMRKLPGNLRYHGLAKSKFIKNRIFESVDTAAWISVALAKKSE
LPjun08P16500mDRAFT_1022466	LPjun08P16500mDRAFT_10224662	F013191	KCYFRGFDLIPSMHYDTLKQTTDKKYKIGENQPKTDHFIQFAHEGVMYFIWIDPSDPTENIAWWSDTTFEEWVTDTVALRLAAQQNPSETFFYCVGFDYYHDQTKDGIFLGTSITEFHDEKQDSWIGQHKHIEEEYPNSKFIFVGKDMDYGEFENLLNK*
LPjun08P16500mDRAFT_1023381	LPjun08P16500mDRAFT_10233811	F064081	HDLIQMKIDRRDFHYVTPPSSLSVIEADGSVSSKINTEEGDKEKTQFDASVSTEXGRLCSDNADFLGKPEAXISLVPTTFGQAGALNKGPKKEISIGKDNQLEVKEQADNKDSSGFAVKEDIKENHVEDVIARRISQRLQLDSVKINFSAPGDSSREVGDLISFDFPTENSKVASSSGRGAGHKYYSGKFLITSLRHKITQDEYTXHVEAIKDGYKSAISSGFEAADP
LPjun08P16500mDRAFT_1023558	LPjun08P16500mDRAFT_10235582	F101337	MLELLIFGLVVFAVICLWVLIEERKSPKFXXWFIPLFXVLVTSTYLTYTSILGYPKEGIPKKGIYLKHYIDEPDWVYIWVLGENNIPMGYKLVYSRAVHNSLLGVQGKANEGKFMVLGEDENALGSIGEQEEQGEESRGGFTVGGDISFYEWDYSAAMPPKSTINERNR*
LPjun08P16500mDRAFT_1023719	LPjun08P16500mDRAFT_10237191	F066850	IGPNTTSHGQFADSSGSEGATVDIYIIGNSNTLQTSSHGTGNYQLHDTIGNSNILDVHSSYTSTTDPYGNGMYIGGDSNYLRTIINGDSNTIGLYMAGGNNTARIYLYTDDTQINFAQTGGGNTGQVTITGDSIYDYTLNFAQNGSDNCTYSYNRNDQTADVTATVSNGC*
LPjun08P16500mDRAFT_1023943	LPjun08P16500mDRAFT_10239433	F014192	VKKFTSVKLYGAKPSIVIAPSRKGAKNITKNLLLSKAIKLKSLLLMNI
LPjun08P16500mDRAFT_1024151	LPjun08P16500mDRAFT_10241513	F052632	MLINGVNLMHHLNRCRLRLQKHMLGEKQLGSPNPL
LPjun08P16500mDRAFT_1024211	LPjun08P16500mDRAFT_10242112	F030806	METINEPNHPTDYRLVKLMDGSILMGTISVDEQHMRIENPLELTTIPRMTEFGLKEDTTLAKWIPFTSDKEFVITKDKVVVISLATVELAHFYEVVLNKMQSDTRHARPPLTPDDIDRIL
LPjun08P16500mDRAFT_1025139	LPjun08P16500mDRAFT_10251392	F032036	MKWIILVYLTIAAGTTEGDISYTRLEHPAKDFQECVDIEQQINDIVHRGRESETKYVRFLYWEYKNILHEIKAECIYADSPVPNPKWFSEKXK*
LPjun08P16500mDRAFT_1025139	LPjun08P16500mDRAFT_10251393	F008625	VGKNIEVKEVDEVTEISGNRLVWRHIQKENQKMILDPLGYDPIIDIDEIHSRNRRKTDDPYIRATMKNADYKKWKDNPAERR*
LPjun08P16500mDRAFT_1026461	LPjun08P16500mDRAFT_10264612	F072857	DTVDDELLNRFGAVANQHIDNILKQHDERIPLKVPSILADVKMSANYYVCSLFRGKRGDNDTAKFWKDMFIDTINGIIEERSIEGLSYDVQRFNDRYRQEDVYRLW*
LPjun08P16500mDRAFT_1026958	LPjun08P16500mDRAFT_10269583	F012354	VCIIVSSRIYPSAKIPKPIPIAKKAIDNLNNVGLPVFLKPKYEIEPIVIPITNPTKFKILSCKNSNYAN*
LPjun08P16500mDRAFT_1028671	LPjun08P16500mDRAFT_10286711	F000245	MKTFSRFKESKLDDKLDKLVSNEIKKRKLAKFPVNATDDIKMRMKPNKPVFKFPSPNSDMMIHVYLRKMTPPKKGMMAFNYQLEDK*
LPjun08P16500mDRAFT_1028671	LPjun08P16500mDRAFT_10286712	F023211	MKSFVQHLKEFTIKSTSDIVFEVGSQGQASSALKIPLSGPMFKRIWPDTIRTTVFHVLDAEDIYDLKKLEGKKKSISAFFSMMAKQMESGIAGGGGVVAELEADVIVSAR
LPjun08P16500mDRAFT_1028749	LPjun08P16500mDRAFT_10287491	F014899	PEALASMDSKIEQIMAHLASKSDAPPDDFGFSQEDKDKQDETLAGIELKIDKILSLEQDEERAQTTADILAQLNDATGESRTSSKKAGEVVGKQDEIMKFLESMSPKIDKILKLESLESLLEGTSGKLDSLTASQVQSVTAEPPDLTPIMEKLEWLDKDVQKILKMEQLEAVQSLQKSSADISTVIKEIEERKKDINLKYK
LPjun08P16500mDRAFT_1029229	LPjun08P16500mDRAFT_10292291	F002715	MPEEELQSVKLEVGLLKNEVEVRGKQIETLLSKLDLTADKLQELTVQIIKLNTRQEDYLRHTSNMTDEFKILHTRIGDLHDKQLASQKEIEIRLDRLDQYKSKLM
LPjun08P16500mDRAFT_1031241	LPjun08P16500mDRAFT_10312414	F038427	MTHKQVMSVIKEGLHYLTTIDLVSLHAEISRVQIEHSHKKDLKDG*
LPjun08P16500mDRAFT_1031979	LPjun08P16500mDRAFT_10319792	F026395	MTINEFRNKHCGRGGSTPPPPFTTYGGELGSTDV*
LPjun08P16500mDRAFT_1032000	LPjun08P16500mDRAFT_10320002	F012354	ANIPKPIPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPIRFKIISRKNSNYADSVTVLNKV*
LPjun08P16500mDRAFT_1032332	LPjun08P16500mDRAFT_10323321	F064803	QGEAPVSETINNPSPKPNNVRPKHKKRKVEIFGFKFRGLSELHETLGIFFKDKNIFKCYLLLYN*
LPjun08P16500mDRAFT_1032333	LPjun08P16500mDRAFT_10323331	F073662	SKFPNPILIFCLIIFFDQKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI*
LPjun08P16500mDRAFT_1032455	LPjun08P16500mDRAFT_10324551	F098673	PLINSKIPKNNEKEKKELTVFLGFEIMKHKVTNP*
LPjun08P16500mDRAFT_1032465	LPjun08P16500mDRAFT_10324651	F031254	SVLPDDKPAISDIEAGNEEQLRAYMFQNLTQTILYAVIGFLIFTNVVGPWAAQRRAKRKAEQIAAEQRRKDKYDAMKAELTARRNKD*
LPjun08P16500mDRAFT_1033021	LPjun08P16500mDRAFT_10330212	F016284	MTSKKLKDFRKELLDKYSGKMTGYEHLADGTGDYAKNVPEDSEEKYDYPKYS
LPjun08P16500mDRAFT_1033089	LPjun08P16500mDRAFT_10330892	F092360	IQGVGYEGDREAATRFGAFCDAAQNAYVFEGNWAGTWVTNQALGWNDIQGNVNRINGFAMDPLGWATLRNKDATNSWIWSPSHHPDRLEDTSENKKDPYPNITSGAADSNYLKATASMDDEDYFQTQADNSYWANNYPLDTA*
LPjun08P16500mDRAFT_1033253	LPjun08P16500mDRAFT_10332532	F016736	VLTLNPKGVYLIDQLGPTYKQLQTGVREKEKVETKXESDAKSRR*
LPjun08P16500mDRAFT_1033286	LPjun08P16500mDRAFT_10332862	F003373	MTPVLDEQDLKVIRLDNGDILFSKVLIPDKSKSTGYLELHWPMKVLVRYDEDQRSTHVALLKWLPFTDVTSVPLAARCVMSVSELGEEYKKFYLSTVKESNTESMEEE
LPjun08P16500mDRAFT_1033294	LPjun08P16500mDRAFT_10332941	F078811	PQSDSWSTTIADWNTLRFTGTLNSSVDGETMRLSDINGTNSSQNHKINWAFPTEVTKSA*
LPjun08P16500mDRAFT_1033997	LPjun08P16500mDRAFT_10339972	F072760	MSMELHTLRAVKITQNIFELNRLNTELQHLKICVKVLENRKTELESSLTH*
LPjun08P16500mDRAFT_1034042	LPjun08P16500mDRAFT_10340421	F099428	LATKLNVDTGGLDVGKKLWERHQKDEYTHVDNYKEAICINCFKKDATSATIVDICGECGGKRGREPLLATIAQKMYG
LPjun08P16500mDRAFT_1034697	LPjun08P16500mDRAFT_10346971	F008625	MTEIAGNRLVWRHIQKENQKMILDPLGYDPIIDIDEIHSRNRRKTDDPYIRATMKNADYKKWKDNPAERR*
LPjun08P16500mDRAFT_1034836	LPjun08P16500mDRAFT_10348363	F049705	MVFKGVMIVILMLTSCSYDTKVVCDYRWHHKMTMKKLMQRCNYIPYGDVWVKKQGEEYGK
LPjun08P16500mDRAFT_1034945	LPjun08P16500mDRAFT_10349452	F031898	MESTAVXDFQKXIEEMNDDDARLKIIKDWEKYRERKDLGIRNYPESCMERMLSDDQVHGI
LPjun08P16500mDRAFT_1035011	LPjun08P16500mDRAFT_10350111	F007585	YIRKYFDKMRPPRGMLVIASRNYETFRKSWDMLEQKATEDPYMIHPLLVESEKGGKNMAQWIDFTGSLKELEFMALRKELRQIIGAMYGVLPLYYGEMPSGWSQEGXQVTITNRAVTWSQDILRKAFLNKIASLLGVDDWELRLKVGEETDKLRELQTQSTEIQNMAAMQAMGFEVKR
LPjun08P16500mDRAFT_1035042	LPjun08P16500mDRAFT_10350421	F015025	GGLKDLAKTQGLSSQRILXXGEFITEGVMNDLLKAGKSXKDSEITLDDGADIPIDPLTSQILVKYIEGLSSSEKNRTIQQIQRTERAFMKVLGKAHENX*
LPjun08P16500mDRAFT_1035818	LPjun08P16500mDRAFT_10358181	F005336	ELEKMLIDLAIKHDPKNKEYLKTVPEIGIGVWYKLQTDFKDDGKKISLIIADYIDGVNAILKKHKKDIQGVVHGYYVRRGAVAVKHPSGRMVGGDSAIKEWNVYDEQVVDKIKIIKVHTFNTKTRETDWIAKSVIPRLGKIPHTHWVGGATELSTYVSQVAEAEVRSIGRSKR*
LPjun08P16500mDRAFT_1037523	LPjun08P16500mDRAFT_10375231	F040325	MARRKIGNSHTTICVTWEDKELFRKFASFVKKTRTGNLYESDAVLFGKMLNHFKDNNTI
LPjun08P16500mDRAFT_1038997	LPjun08P16500mDRAFT_10389971	F105494	RKSIIILQAKYGIKKPTWLMKNTVYRYERGVYKLPSLLTVEEHIMNMVKSYGEND*
LPjun08P16500mDRAFT_1039211	LPjun08P16500mDRAFT_10392111	F080484	INAHEDPNANNILDSFAGIFIALHLFDVYTQTKKYNRNLSMSIFGQKTPPSTLGAIFPLKTNYKHYFNFFGVPNHRTGIGMFGYSITKRTKKNNEYYMGIGTIIINLSITAGWKYYFKKSNADDYYLAMSLVGSTLEIDDRYDETKKVSKDFIAGNFSAGYEKRLSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000251: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences