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Sample 3300000197
3300000197: Delisea pulchra's surface microbial communities from Botany Bay, Sydney, Australia - BBAY57_SOAP_k21_Abyss_k53_GAA
Overview
| Basic Information |
| IMG/M Taxon OID | 3300000197 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0047590 | Gp0053778 | Ga0010871 |
| Sample Name | Delisea pulchra's surface microbial communities from Botany Bay, Sydney, Australia - BBAY57_SOAP_k21_Abyss_k53_GAA |
| Sequencing Status | Permanent Draft |
| Sequencing Center | J. Craig Venter Institute (JCVI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 413084072 |
| Sequencing Scaffolds | 1 |
| Novel Protein Genes | 1 |
| Associated Families | 1 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales → Coriobacteriaceae → Collinsella → Collinsella aerofaciens | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Delisea Pulchra's Surface Microbial Communities From Botany Bay, Sydney, Australia |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Delisea Pulchra's Surface → Delisea Pulchra's Surface Microbial Communities From Botany Bay, Sydney, Australia |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Surface (saline) |
| Location Information |
| Location | Botany Bay, Sydney, NSW, Australia |
| Coordinates | Lat. (o) | -33.991017 | Long. (o) | 151.232433 | Alt. (m) | N/A | Depth (m) | 7 |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F037503 | Metagenome / Metatranscriptome | 168 | Y |
Associated Scaffolds
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
| BBAY57_c10014452 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales → Coriobacteriaceae → Collinsella → Collinsella aerofaciens | 983 | Open in IMG/M |
Sequences
| Scaffold ID | Protein ID | Family | Sequence |
|---|
| BBAY57_c10014452 | BBAY57_100144521 | F037503 | VGFILIEVELPIGLGGVKSYQILMNSECRKIYSAVRAWVLRSLSERERTQIXNDVQQ* |
