| Basic Information | |
|---|---|
| IMG/M Taxon OID | 2070309008 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0045482 | Gp0051730 | Ga0011110 |
| Sample Name | Wastewater viral communities from wastewater treatment facility in Singapore - AD-deduplicated data |
| Sequencing Status | Permanent Draft |
| Sequencing Center | University of Illinois, Urbana-Champaign |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 91112142 |
| Sequencing Scaffolds | 32 |
| Novel Protein Genes | 33 |
| Associated Families | 18 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 23 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104 | 2 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 1 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium 34_109 | 2 |
| All Organisms → cellular organisms → Bacteria | 3 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Wastewater Viral Communities From Wastewater Treatment Facility In Singapore |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Singapore: Singapore | |||||||
| Coordinates | Lat. (o) | 1.332 | Long. (o) | 103.756 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F013948 | Metagenome / Metatranscriptome | 267 | Y |
| F021489 | Metagenome / Metatranscriptome | 218 | N |
| F024321 | Metagenome / Metatranscriptome | 206 | N |
| F024972 | Metagenome / Metatranscriptome | 203 | Y |
| F033819 | Metagenome / Metatranscriptome | 176 | Y |
| F039402 | Metagenome / Metatranscriptome | 164 | Y |
| F051061 | Metagenome / Metatranscriptome | 144 | N |
| F058173 | Metagenome / Metatranscriptome | 135 | N |
| F058559 | Metagenome / Metatranscriptome | 135 | Y |
| F058560 | Metagenome / Metatranscriptome | 135 | Y |
| F062245 | Metagenome / Metatranscriptome | 131 | Y |
| F071978 | Metagenome | 121 | Y |
| F079783 | Metagenome / Metatranscriptome | 115 | N |
| F088496 | Metagenome / Metatranscriptome | 109 | Y |
| F093490 | Metagenome / Metatranscriptome | 106 | N |
| F095525 | Metagenome / Metatranscriptome | 105 | Y |
| F095526 | Metagenome / Metatranscriptome | 105 | N |
| F102171 | Metagenome / Metatranscriptome | 102 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| AD_consensus_for_cluster_13702 | Not Available | 528 | Open in IMG/M |
| AD_consensus_for_cluster_15207 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104 | 525 | Open in IMG/M |
| AD_consensus_for_cluster_16667 | Not Available | 526 | Open in IMG/M |
| AD_consensus_for_cluster_1823 | Not Available | 564 | Open in IMG/M |
| AD_consensus_for_cluster_21058 | Not Available | 507 | Open in IMG/M |
| AD_consensus_for_cluster_21176 | Not Available | 517 | Open in IMG/M |
| AD_consensus_for_cluster_28203 | Not Available | 513 | Open in IMG/M |
| AD_consensus_for_cluster_2838 | Not Available | 557 | Open in IMG/M |
| AD_consensus_for_cluster_29424 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 515 | Open in IMG/M |
| AD_consensus_for_cluster_3291 | Not Available | 550 | Open in IMG/M |
| AD_consensus_for_cluster_42432 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium | 505 | Open in IMG/M |
| AD_consensus_for_cluster_51430 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104 | 500 | Open in IMG/M |
| AD_consensus_for_cluster_54241 | Not Available | 500 | Open in IMG/M |
| AD_consensus_for_cluster_7808 | Not Available | 503 | Open in IMG/M |
| AD_singleton_cluster_10742 | Not Available | 534 | Open in IMG/M |
| AD_singleton_cluster_14881 | Not Available | 528 | Open in IMG/M |
| AD_singleton_cluster_21254 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium 34_109 | 521 | Open in IMG/M |
| AD_singleton_cluster_2180 | Not Available | 559 | Open in IMG/M |
| AD_singleton_cluster_24526 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium 34_109 | 518 | Open in IMG/M |
| AD_singleton_cluster_26540 | All Organisms → cellular organisms → Bacteria | 516 | Open in IMG/M |
| AD_singleton_cluster_28738 | Not Available | 515 | Open in IMG/M |
| AD_singleton_cluster_30353 | Not Available | 513 | Open in IMG/M |
| AD_singleton_cluster_32492 | Not Available | 512 | Open in IMG/M |
| AD_singleton_cluster_33601 | Not Available | 511 | Open in IMG/M |
| AD_singleton_cluster_34718 | All Organisms → cellular organisms → Bacteria | 510 | Open in IMG/M |
| AD_singleton_cluster_36683 | Not Available | 509 | Open in IMG/M |
| AD_singleton_cluster_39269 | Not Available | 507 | Open in IMG/M |
| AD_singleton_cluster_43108 | Not Available | 504 | Open in IMG/M |
| AD_singleton_cluster_47348 | Not Available | 502 | Open in IMG/M |
| AD_singleton_cluster_48307 | All Organisms → cellular organisms → Bacteria | 501 | Open in IMG/M |
| AD_singleton_cluster_48789 | Not Available | 501 | Open in IMG/M |
| AD_singleton_cluster_5596 | Not Available | 545 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| AD_consensus_for_cluster_13702 | AD_00954070 | F095526 | MEIKIGSNSLIRDIDYDSKLCLTLGASGITIPLVALPSFEVDIFVENRETEKVHCTFDGATKTNCTITSAGEITCYMPAYTFSVGGKLFIEVITHTPDTNFADGSYDESITIDT |
| AD_consensus_for_cluster_15207 | AD_00748390 | F071978 | VVLQPRRDLKEIPAQKLSGYDTVHVDLCGYSRGFAEIGGEKVDVARNYLIEQALESGAKYALFVGEDTVLPYDGFMKLHETAEKNLDAMVVGVYYIKMS |
| AD_consensus_for_cluster_16667 | AD_02193870 | F039402 | LTDYSNLEKEIENVPEPKVLPRGTEVKARIINVRDGISDKNNAQWYQPVFAVPNEPLAMEFNDFFWDLSDRDKLDEKSGIRAMRKFKMFAEAFGIDYSKPFSWTDDLVGKEGWVILGIRKSEEYGDQNTVQKYMSRK |
| AD_consensus_for_cluster_1823 | AD_02199390 | F058559 | MNENFMYYVNGHYFKTLNEARNYACGDHGRDVLLTYGDYDETILSYHPMSERLERIQSVSEAKXKLLREYEKKRFIK |
| AD_consensus_for_cluster_21058 | AD_00760820 | F093490 | GVDKDMKTLLSIALIFIATTVFATPFLVSDPQSGVTSYQLTGWSETNVTAQADGSLRMDVGSAVQGTTYNLTIAACNIWGCSTTVPFAFGKQLPAVPSQLRLVP |
| AD_consensus_for_cluster_21176 | AD_00837500 | F033819 | IIIKRFITMDASEPKQSRVTNTAIQSQLVELSVRLARMEKDIQEIKNNLSESGDKVISLEKSEAGRYPLIDRRLDNLEKRTDKHEDEIDQLVKLTQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG |
| AD_consensus_for_cluster_28203 | AD_00977970 | F024321 | MLEEIVMIIAGMAGLGAFTSMLINLLKAIGLIKDGQGDKAFKIADLVVFVVVMVLYLTRMPIDWAQVDQWLILLTALLGYVVSVFSGELTHDTIKGTPLVG |
| AD_consensus_for_cluster_2838 | AD_01029870 | F095525 | MKALTDIGLVALGLVVGVVVGQLLQYNKHRIENFINKLKKK |
| AD_consensus_for_cluster_29424 | AD_01066110 | F095525 | MKAFTDIGLVALGLVVGVVVGQLLQYNKHRIENFINRXKKKXXXXX |
| AD_consensus_for_cluster_3291 | AD_00654120 | F079783 | MKVLVTDFFDVWGNSKDGLEVNNQCRTVYNTRYKLNSRKSCLKFLKSIDYLKKSVREASIYWEDMENGYILYQSKGFXADMF |
| AD_consensus_for_cluster_42432 | AD_01348630 | F088496 | MXKLNXNYNQDKLDLQKDQHLMSIRQNGKRIGDIEIVDGKITTTGIIGDNQYDNFVELIKGLQGFDIKIDEFYW |
| AD_consensus_for_cluster_51430 | AD_00579050 | F058560 | IECTXVQNVVKXANEVELIYPRTDEQEERRELAFICQSCLYVFGESDVENNNYSFRNESL |
| AD_consensus_for_cluster_54241 | AD_01824070 | F062245 | MTVCLETIIQRWNGQDGDQVTITDAREGSTFHAVDTGRXYVFHDGGWVEDLRDIYXXXXXXXX |
| AD_consensus_for_cluster_7808 | AD_01841710 | F013948 | MRDNLKKIVAYIFRSWEDEPGYTHPRLKILPPFLLELLTYLISLAILYQVGAYLWSII |
| AD_singleton_cluster_10742 | AD_01482270 | F058559 | MKEFMYYVNGRYFTTLKSARNYATGDHGRDVLLTYGDYDETILSYHPMSERLERIQTVNQAKEKLLREYEKKQFIKIMRL |
| AD_singleton_cluster_14881 | AD_02093400 | F051061 | MGLLDKLEERAKNRERKSLYIEEIDETVYWYPMTAGERQRIMNAAGFKWARDAVQMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINKIADELLTKIVNAIDPPRTEEQQIEEA |
| AD_singleton_cluster_21254 | AD_01383030 | F021489 | LKANSNLKRFGVEWIKLNHELCRVFATNGYAMIVADLEPNWWHDIFDGLPELTLITKLKRDEVHYFEGKELENFNYLSVFEAVGREPNYVPVMHLDLNLLRKLTDKFDDVYFVKQSGLALFMKLEGDKYPAGSYYGALMPKSITQVETAKIIDA |
| AD_singleton_cluster_2180 | AD_02457200 | F095525 | MKPVTAIWLVALGLVAGVVVGQLLQYNQINIQNIIKKIFGK |
| AD_singleton_cluster_24526 | AD_01212720 | F021489 | LVGFVGEQKGAKMTTFERKIESTQEYNLLKLLKANSNLKRFGVEWIKLNHELCRVFATNGYAMIVADLEPNWWHDIFDGLPELTLITKLKRDEVHYFEGKELENFNYLSVFEAVGREPNYVPVMHLDLNLLRKLTDKFDDVYFVKQSGLALFMKLEGDKYPAGSYYGALMPK |
| AD_singleton_cluster_26540 | AD_01606150 | F033819 | MRLSMDASEPKQSRVTNTAIQSQLVELSVRLTRMEKDIQEIKKTLFESDKKIGDMEKNEAGRSPLIERRLDSLEKRTDEHEDEIDQLVKITQSLANTNKVLT |
| AD_singleton_cluster_28738 | AD_01500310 | F058173 | MKMAYLIGVVVALILVVVAFSIGKHYPSEDIVGQLTEQIRKETIKQYDQRINELNIQLKTSQAAYIESQKRYDTIIKKIKELKDGKDNIKPPVDSVELNNRFNALGYTPTGK |
| AD_singleton_cluster_30353 | AD_00301560 | F062245 | MTVCLETNSRKWNGQEGDQVTIDNPPEGSTFHAVDTGAVYIFHNGGWTEDLRQTY |
| AD_singleton_cluster_32492 | AD_00760630 | F051061 | GLLDKLEERAKNRERKSLYIEEIDETVYWYPMTAGERQRIMNAAGFKWARDAVQMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINKIADELLTKIVNAIDPPRTEEQQIEEAK |
| AD_singleton_cluster_33601 | AD_00101430 | F033819 | IQSQLVELSVRLNSYGKRLQEIKSTLSSSGEKVSSLEKSEAGRYPLIERRLEALEKRTDEHEDEIDQLVKITQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG |
| AD_singleton_cluster_34718 | AD_02763710 | F033819 | MRLSMDASEPKQSRVTNTAIQSQLVELSVRLTRMEKDLQEIKSTLSSSGEKVSSLEKSEAGRYPLIERRLEALEKRTDEHEDEIDQLVKITQSLANTNKVLTWVAGL |
| AD_singleton_cluster_36683 | AD_00266420 | F058173 | MKMTYWIAIGVAVVVLVVAALMWGRYHPDPDVIGRLTDQIRLETIKQYDQRINELNIQLKTSQAAYIESQKRYDTIIKKIKELKDGKDAIKPPADSTELTA |
| AD_singleton_cluster_39269 | AD_02393840 | F033819 | MRLSMEASEAKQSRVTNTAIQSQLVELSVRLTRMEKDIQEIKKTLFESDKKIGDMEKNEAGRNPLIERRLDNLEKRTDKHEDEIDQLVKITQSLANTNK |
| AD_singleton_cluster_43108 | AD_01940860 | F058173 | IGVVVALVLIIVAFSIGKHYPSEDIVGQLTEQIRKETIKQYEQRIADLDRQLKVSQTAYIESQKRYDTIIKRLKELRDGKDSIKPPQDSGELITRFNNLGYTPVGK |
| AD_singleton_cluster_44704 | AD_02758200 | F102171 | MTTFERKIESVQEYNLLKLLKANSDLKRFGVEWIKLDHALCRVFATNGYAIIVAELEPNQWHDIFDGLPELVFITKLKRDEVHYFEAKELEKFNYLSVFEAVGKEPNYQPVMHLDLKLLRNLTDKFDDVYFVKQSGL |
| AD_singleton_cluster_47348 | AD_00684810 | F033819 | EPKQSRVTNTAIQSQLVELSVRLTRMEKDLQEIKSTLSSSGEKVSSLEKSEAGRYPLIERRLEALEKRTDEHEDEIDQLVKITQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG |
| AD_singleton_cluster_48307 | AD_02306020 | F033819 | TIEGNTNTAIQSQLVELSVRLTRMEKDLQEIKSTIFASGEKMNAMEKNEAGQRPLIERRLDNLEKRTDKHEDEIVQLVKITQSLANTNKVLTWVAGLAGA |
| AD_singleton_cluster_48789 | AD_00201920 | F024972 | MEMKITKVTKTYFETEGERVYFFEPLDEEMTISELQELMNENEKFLLGEIQKMRKEKI |
| AD_singleton_cluster_5596 | AD_00024010 | F051061 | VIDKLRKETGQKIRETKSLYIEEIDETVYWYPMTAGERQRIMNAAGFKWARDAVQMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINKIADELLTKIVNAIDPPRTEEQQIEEAKN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |