Scaffold BIB32012_10117513

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold BIB32012_10117513

Scaffold BIB32012_10117513

Overview

Basic Information
Taxon OID	3300002036 Open in IMG/M
Scaffold ID	BIB32012_10117513 Open in IMG/M
Source Dataset Name	Delisea pulchra microbial communities from Sydney, Australia, affected by bleaching disease - 2012_BI_B3
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	886
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Algae → Red Algae → Ectosymbionts → Unclassified → Delisea Pulchra → Delisea Pulchra Microbial Communities From Sydney, Australia, Affected By Bleaching Disease

Source Dataset Sampling Location
Location Name	Bare Island, Sydney, Australia
Coordinates	Lat. (^o)	-33.59	Long. (^o)	151.13	Alt. (m)		Depth (m)	5
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F025141	Metagenome / Metatranscriptome	203	Y

Sequences

Protein ID	Family	RBS	Sequence
BIB32012_101175131	F025141	N/A	MIQCEYCTRGFVDTANGLVAKTFHELLHEPDVVNK*

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