Metagenome / Metatranscriptome Family F101799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	40 residues
Representative Sequence	AMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Number of Associated Samples	77
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.76 %
% of genes near scaffold ends (potentially truncated)	82.35 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.980 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.137 % of family members)
Environment Ontology (ENVO)	Unclassified (56.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.843 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.87% β-sheet: 0.00% Coil/Unstructured: 73.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00083	Sugar_tr	11.76
PF07690	MFS_1	9.80
PF02582	DUF155	8.82
PF02668	TauD	4.90
PF02775	TPP_enzyme_C	2.94
PF00072	Response_reg	1.96
PF03824	NicO	0.98
PF05711	TylF	0.98
PF12910	PHD_like	0.98
PF01070	FMN_dh	0.98
PF00528	BPD_transp_1	0.98
PF11737	DUF3300	0.98
PF00005	ABC_tran	0.98
PF01850	PIN	0.98
PF00067	p450	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1723	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family	Translation, ribosomal structure and biogenesis [J]	8.82
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.90
COG2124	Cytochrome P450	Defense mechanisms [V]	0.98
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.98
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.98 %
Unclassified	root	N/A	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.96 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.84 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.84 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.98 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.84 %
Paraburkholderia bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	0.98 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_14841970	Not Available	605	Open in IMG/M
3300005518\|Ga0070699_100973226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300005554\|Ga0066661_10660283	Not Available	616	Open in IMG/M
3300005591\|Ga0070761_10478637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300005764\|Ga0066903_102848200	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300005764\|Ga0066903_103339406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300005764\|Ga0066903_103946220	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300005764\|Ga0066903_105688029	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300005764\|Ga0066903_108143471	Not Available	537	Open in IMG/M
3300006172\|Ga0075018_10430625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300006755\|Ga0079222_10998296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300006800\|Ga0066660_10667049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300010046\|Ga0126384_10246740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300010048\|Ga0126373_10864705	Not Available	968	Open in IMG/M
3300010048\|Ga0126373_12412322	Not Available	586	Open in IMG/M
3300010154\|Ga0127503_10142372	Not Available	526	Open in IMG/M
3300010360\|Ga0126372_10260319	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300010360\|Ga0126372_10516975	Not Available	1125	Open in IMG/M
3300010361\|Ga0126378_13088189	Not Available	530	Open in IMG/M
3300010376\|Ga0126381_104866257	Not Available	516	Open in IMG/M
3300010398\|Ga0126383_10190846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1957	Open in IMG/M
3300012212\|Ga0150985_105390163	All Organisms → cellular organisms → Bacteria → Proteobacteria	3404	Open in IMG/M
3300012469\|Ga0150984_105163526	Not Available	642	Open in IMG/M
3300012582\|Ga0137358_10681407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300012971\|Ga0126369_10168679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2078	Open in IMG/M
3300016270\|Ga0182036_10535322	Not Available	932	Open in IMG/M
3300016270\|Ga0182036_11007859	Not Available	687	Open in IMG/M
3300016294\|Ga0182041_11639633	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300016319\|Ga0182033_10605105	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300016357\|Ga0182032_10380539	Not Available	1137	Open in IMG/M
3300016357\|Ga0182032_10866571	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300016371\|Ga0182034_11789266	Not Available	541	Open in IMG/M
3300016422\|Ga0182039_10934754	Not Available	775	Open in IMG/M
3300016422\|Ga0182039_11439389	Not Available	626	Open in IMG/M
3300017822\|Ga0187802_10293331	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300017975\|Ga0187782_10970188	Not Available	660	Open in IMG/M
3300020580\|Ga0210403_10130280	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300020583\|Ga0210401_10806970	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300020583\|Ga0210401_10969477	Not Available	709	Open in IMG/M
3300021401\|Ga0210393_10643513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300021401\|Ga0210393_10683295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	837	Open in IMG/M
3300021433\|Ga0210391_11442007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	529	Open in IMG/M
3300021560\|Ga0126371_10387004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300021560\|Ga0126371_13719230	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300022527\|Ga0242664_1143727	Not Available	522	Open in IMG/M
3300022720\|Ga0242672_1045726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300022726\|Ga0242654_10290970	Not Available	598	Open in IMG/M
3300025898\|Ga0207692_10736628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300027610\|Ga0209528_1089233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300027701\|Ga0209447_10194524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	555	Open in IMG/M
3300027812\|Ga0209656_10008833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6398	Open in IMG/M
3300027855\|Ga0209693_10074631	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300031231\|Ga0170824_124896350	Not Available	610	Open in IMG/M
3300031545\|Ga0318541_10039823	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300031545\|Ga0318541_10328793	Not Available	853	Open in IMG/M
3300031546\|Ga0318538_10188178	Not Available	1100	Open in IMG/M
3300031546\|Ga0318538_10530607	Not Available	638	Open in IMG/M
3300031573\|Ga0310915_10041549	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300031573\|Ga0310915_10745390	Not Available	690	Open in IMG/M
3300031668\|Ga0318542_10224455	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031680\|Ga0318574_10681788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031719\|Ga0306917_10420295	Not Available	1045	Open in IMG/M
3300031719\|Ga0306917_10798600	Not Available	740	Open in IMG/M
3300031724\|Ga0318500_10280684	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300031724\|Ga0318500_10479621	Not Available	624	Open in IMG/M
3300031744\|Ga0306918_11161815	Not Available	597	Open in IMG/M
3300031744\|Ga0306918_11209072	Not Available	583	Open in IMG/M
3300031747\|Ga0318502_10314999	Not Available	922	Open in IMG/M
3300031768\|Ga0318509_10154548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300031781\|Ga0318547_10083483	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300031781\|Ga0318547_10377417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	868	Open in IMG/M
3300031797\|Ga0318550_10398234	Not Available	666	Open in IMG/M
3300031805\|Ga0318497_10639830	Not Available	596	Open in IMG/M
3300031831\|Ga0318564_10329784	Not Available	672	Open in IMG/M
3300031833\|Ga0310917_10971837	Not Available	570	Open in IMG/M
3300031835\|Ga0318517_10029911	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300031845\|Ga0318511_10547103	Not Available	537	Open in IMG/M
3300031860\|Ga0318495_10075515	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300031879\|Ga0306919_11247188	Not Available	564	Open in IMG/M
3300031890\|Ga0306925_10460529	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300031893\|Ga0318536_10484422	Not Available	622	Open in IMG/M
3300031896\|Ga0318551_10600178	Not Available	635	Open in IMG/M
3300031896\|Ga0318551_10772346	Not Available	558	Open in IMG/M
3300031910\|Ga0306923_10792590	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300031912\|Ga0306921_11376026	Not Available	777	Open in IMG/M
3300031912\|Ga0306921_11596762	Not Available	709	Open in IMG/M
3300031947\|Ga0310909_10075201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2664	Open in IMG/M
3300031954\|Ga0306926_10381548	Not Available	1741	Open in IMG/M
3300031954\|Ga0306926_10508731	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300031981\|Ga0318531_10584557	Not Available	506	Open in IMG/M
3300032001\|Ga0306922_10329742	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300032001\|Ga0306922_12284495	Not Available	519	Open in IMG/M
3300032010\|Ga0318569_10010975	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300032035\|Ga0310911_10823577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	536	Open in IMG/M
3300032039\|Ga0318559_10301537	Not Available	744	Open in IMG/M
3300032043\|Ga0318556_10018925	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300032043\|Ga0318556_10264663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300032059\|Ga0318533_10126865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1789	Open in IMG/M
3300032066\|Ga0318514_10448122	Not Available	686	Open in IMG/M
3300032066\|Ga0318514_10718300	Not Available	531	Open in IMG/M
3300032091\|Ga0318577_10551617	Not Available	548	Open in IMG/M
3300032261\|Ga0306920_102897949	Not Available	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.14%
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Sediment	Environmental → Aquatic → Sediment	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.35%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_148419701	3300005363	Tropical Rainforest Soil	GTPKPAAIRGAVSALRDGRVCVVGVRVAGRYSAGATAAIMQRTPG*
Ga0070699_1009732261	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DPKQLMAAIREAVAAVRAGKVCVVDVRVATGYAADATAAILQRTPRQE*
Ga0066661_106602832	3300005554	Soil	VAAVRAGKVCVVDVHVAAGYDPGAASGIMQQAGRG*
Ga0070761_104786371	3300005591	Soil	LVAAITEAVAAVRAGKVCVVDVRVAVGYDPGGAGGIMQR*
Ga0066903_1028482002	3300005764	Tropical Forest Soil	MREAVAAVRAGRVCVADVRAAPGYSAGPTAAIMQRTPG*
Ga0066903_1033394062	3300005764	Tropical Forest Soil	VAGYLIRLSRALHEAVAAVRAGRVCVVDLRVAPGYSAGATAAIMQRTA*
Ga0066903_1039462201	3300005764	Tropical Forest Soil	AVAAVRAGKVCVVDVRVAPGYSAGATAAIMERTPGTAGTAP*
Ga0066903_1056880291	3300005764	Tropical Forest Soil	MREAVAAVRTGRVCVADVRVAPGYSAGGTAAILQRTPG*
Ga0066903_1081434711	3300005764	Tropical Forest Soil	VAAVRAGKVCVVDVRVAPGYAAGATAAIMEHKPG*
Ga0075018_104306252	3300006172	Watersheds	VAAVRAGKVCVVDVHVATGYDPSAASGILQRAPG*
Ga0079222_109982961	3300006755	Agricultural Soil	RLLPALNEAVAAVRAGKVCVVDVHVAAGYDPGATSGILQRAG*
Ga0066660_106670492	3300006800	Soil	LSEAVAAVRAGKVCVVDVHVAAGYDPGAASGIMQRSG*
Ga0126384_102467401	3300010046	Tropical Forest Soil	MREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG*
Ga0126373_108647052	3300010048	Tropical Forest Soil	MREAVAAVRAGRVCVVDVRVAPGYSAGTTAAIMQRTPG*
Ga0126373_124123221	3300010048	Tropical Forest Soil	MREAVAAVRAGRVCVADVRAAPGYSAGATAAIMQRTARVW
Ga0127503_101423722	3300010154	Soil	SAMREAVAAVRAGKVCVLDVRVAPGYSAGATAAIMQRTP*
Ga0126372_102603191	3300010360	Tropical Forest Soil	LVAAIREGVAAVRSGKVCVVDVRVAAGYAAEATAAILQRASG*
Ga0126372_105169751	3300010360	Tropical Forest Soil	VAATRAGKVCVVDIRVAAGYDPGAASGIMQSSAGVAENRG*
Ga0126378_130881891	3300010361	Tropical Forest Soil	LVPAMREAVAAVRAGKVCVVDVRVAPGYSASATAAIMQRTPG*
Ga0126381_1048662571	3300010376	Tropical Forest Soil	MREAVAAGRAGRVCVADVRAAPGYSAGATAAIMQRTQG*
Ga0126383_101908463	3300010398	Tropical Forest Soil	MREAVAAVRAGRVCVVDVRVAPGYSAGATAAILQRTP*
Ga0150985_1053901634	3300012212	Avena Fatua Rhizosphere	AVSEAVAAVRAGKVCDVDVRVATGYAADATAAILQRSPR*
Ga0150984_1051635262	3300012469	Avena Fatua Rhizosphere	PAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAILQRTSG*
Ga0137358_106814071	3300012582	Vadose Zone Soil	VAAVRAGKVCVVDVHVAAGYDPGAATGILQRAPG*
Ga0126369_101686791	3300012971	Tropical Forest Soil	MREAIAAVRASRVCVVDVRVAPRYSAGATAAIMQRTP*
Ga0182036_105353221	3300016270	Soil	RKLVPAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRAPE
Ga0182036_110078591	3300016270	Soil	MREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0182041_116396331	3300016294	Soil	LTEAVAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGA
Ga0182033_106051052	3300016319	Soil	MREAVAAVRAGRVCVVDVRVAPGYSTGATAAIMQRNSG
Ga0182032_103805391	3300016357	Soil	EAVAAVRAGKVCVLDVRVAPGYSAGATAAIMQRMPE
Ga0182032_108665712	3300016357	Soil	VAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGG
Ga0182034_117892662	3300016371	Soil	DPRKLVSAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0182039_109347542	3300016422	Soil	MALREAVAAVRAGKVCVVDVRVAPGYSPGATGAIMQQGR
Ga0182039_114393892	3300016422	Soil	EDPRKLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0187802_102933313	3300017822	Freshwater Sediment	AAITEAVTAVRAGKVCVVDVRVAVGYDPGGAAGIIGR
Ga0187782_109701882	3300017975	Tropical Peatland	RKLVSALREAVAAVRSGKVCVVDVRVAPGYSPGATAAIMQQGR
Ga0210403_101302802	3300020580	Soil	MREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMDRPP
Ga0210401_108069701	3300020583	Soil	RRLVSALGEAVATVRAGKVCVVDVHVAAGYDPGAAGGIMQRAG
Ga0210401_109694772	3300020583	Soil	AVAALRAGKVCVVDVRVAPGYSAGATAAIMQRASG
Ga0210393_106435131	3300021401	Soil	DDPRRLLPALNEAVAAVRAGKVCVVDVHVAAGYDPGAATGILQRAPG
Ga0210393_106832951	3300021401	Soil	DDPHRLLPALNEAVAAVRAGKVCVVDVHVAAGYDSGAATGILQRAPG
Ga0210391_114420072	3300021433	Soil	EAVAAVRAGKVCVVDVHVAAGYDPGAATGILQRAPG
Ga0126371_103870041	3300021560	Tropical Forest Soil	MREAVAAVHTGRVCVADVRVAPGYSAGGTAAILQRTPG
Ga0126371_137192301	3300021560	Tropical Forest Soil	DPRKLLPAMRDAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQQSR
Ga0242664_11437271	3300022527	Soil	PAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRASG
Ga0242672_10457262	3300022720	Soil	VDDPRRLLPALNEAVAAVRAGKVCVVDVHVAAGYDPGPTTGILQRAPG
Ga0242654_102909702	3300022726	Soil	AVAAVRAGKVCVVDVRVAPGYSAGATAAILQRTPG
Ga0207692_107366281	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NEAVAAVRAGKVCVVDVHVAAGYDPGAATGILQRAPE
Ga0209528_10892331	3300027610	Forest Soil	AVAAVRAGKVCVVDVHVATGYDPGAASGILQRAPG
Ga0209447_101945241	3300027701	Bog Forest Soil	KKLVAAMTEAVAAVRAGKVCVVDVRVAVGYDPGGAAGIMRR
Ga0209656_100088331	3300027812	Bog Forest Soil	VAAVRAGKVCVVDVRVAAGYDPGAASGIMQHASGG
Ga0209693_100746311	3300027855	Soil	AVAAVRAGKVCVVDVHVATGYDPGAATGILQRAPG
Ga0170824_1248963501	3300031231	Forest Soil	KLVAAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318541_100398233	3300031545	Soil	GVCCMMAAVRAGKVCVVDVRVAPGYSAGATAAIMQHTP
Ga0318541_103287931	3300031545	Soil	CMMAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318538_101881781	3300031546	Soil	DPKQLVGAIGEAVAAVRAGKVCVVDVRVATGYAAEATAAILQRLSG
Ga0318538_105306071	3300031546	Soil	REAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRTP
Ga0310915_100415494	3300031573	Soil	ALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRATG
Ga0310915_107453902	3300031573	Soil	PALREAVAAVRAGKVCVVDVRVAPGYSEGATAAILRHAPG
Ga0318542_102244552	3300031668	Soil	VPALGEAVAAVRAGKVCVVDVRVAPGYSPGATAAIMQQGR
Ga0318574_106817881	3300031680	Soil	AIGEAVAAVRAGKVCVVDVRVATGYAAEATAAILQRSSG
Ga0306917_104202951	3300031719	Soil	IRDGVAAVRAGKVCVVDVRVATGYAAEATAAILQRSSG
Ga0306917_107986001	3300031719	Soil	TEAVAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGA
Ga0318500_102806842	3300031724	Soil	VAALTEAVAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGA
Ga0318500_104796212	3300031724	Soil	VEDPRKLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRATG
Ga0306918_111618151	3300031744	Soil	PAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRTSG
Ga0306918_112090722	3300031744	Soil	MREAVAAVRAGRVCVVDVRVAPGYSASATAAIMQRTPG
Ga0318502_103149992	3300031747	Soil	DPRKLVAAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318509_101545481	3300031768	Soil	SAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318547_100834831	3300031781	Soil	PIEDPKQLVSAIREAVAAVRAGKVCVVDVRVATGYAADATVAILQRSPS
Ga0318547_103774173	3300031781	Soil	EAVAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGG
Ga0318550_103982341	3300031797	Soil	ALTEAVAAVRAGKVCVVDVRVAAGYDPGAASGIMQRSSGA
Ga0318497_106398302	3300031805	Soil	GKLVPAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318564_103297842	3300031831	Soil	VEDPRKLVSAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0310917_109718371	3300031833	Soil	MREAVAAVRTGRVCVADVRAAPGYSAGATAAIMQRTPG
Ga0318517_100299111	3300031835	Soil	LVPAMREAVAAVRSGKVCVVDVRVAPGYSAGATAAIMQHKAD
Ga0318511_105471031	3300031845	Soil	PAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQHTP
Ga0318495_100755152	3300031860	Soil	QLVGAIREAVAAVRAGKVCVVDVHVAAGYAADATAAILQRTSG
Ga0306919_112471881	3300031879	Soil	KLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRATG
Ga0306925_104605291	3300031890	Soil	KQAAMREAIAAVRAGRVCVVDVRVAPDYSAGATAAIMQRTP
Ga0318536_104844222	3300031893	Soil	DPRTLLSAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRKVG
Ga0318551_106001781	3300031896	Soil	MREAVAAVRAGRVCVVDLRVAPGYSASATAAIMQRKVG
Ga0318551_107723462	3300031896	Soil	RKLVSALREAVAAVRAGKVCVVDVRVAPGYSPGATAAIMQHTP
Ga0306923_107925903	3300031910	Soil	MREAVAAVRAGRVCVVDVRVAPGYSASATAAIMQR
Ga0306921_113760262	3300031912	Soil	DPRKLVPAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRTSG
Ga0306921_115967622	3300031912	Soil	EDPGKLVPAMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPR
Ga0310909_100752011	3300031947	Soil	AVAAVRAGRVCVVDVRVAPGYSASATAAIMQRTPG
Ga0306926_103815481	3300031954	Soil	DPRKLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRATG
Ga0306926_105087311	3300031954	Soil	REAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0318531_105845571	3300031981	Soil	AMREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0306922_103297422	3300032001	Soil	MREAIAAVRAGRVCVVDVRVAPDYSAGATAAIMQRTP
Ga0306922_122844951	3300032001	Soil	MREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRAPE
Ga0318569_100109751	3300032010	Soil	REAVAAVRAGKVCVVDVCVAPGYSPGATAAIMQHTP
Ga0310911_108235771	3300032035	Soil	DPKTLVAAMTEAVAAGRAGKVCVVDVRVAVGYDPGGTAGIMRR
Ga0318559_103015371	3300032039	Soil	VPAMREAVAAVRAGKVCVVDVRVAPGYSAGATAAIMQRTSG
Ga0318556_100189254	3300032043	Soil	PRKLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRATG
Ga0318556_102646631	3300032043	Soil	EDPKQLVAAIRDGVAAVRAGKVCVVDVRVATGYAAEATAAIL
Ga0318533_101268651	3300032059	Soil	EAVAAVRAGKVCVVDVRVAPGYSTGATAAIMQHKAD
Ga0318514_104481222	3300032066	Soil	KLVPALREAVAAVRAGKVCVVDVRVAPGYSPGATAAIMQHTP
Ga0318514_107183001	3300032066	Soil	LVPALREAVAALRAGKVCVVDVRVAPGYSPGATAAIVQQGR
Ga0318577_105516172	3300032091	Soil	VEDPRKLVPALREAVAAVRAGRVCVVDVRVAPGYSAGATAAIMQRTPG
Ga0306920_1028979491	3300032261	Soil	REAVAAVRAGKVCVVDVRVAPGYSPGATAAIMQHTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences