Metagenome Family F100119

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100119
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	67 residues
Representative Sequence	AGVQMLSPVNSGRPSDIHSLVTVQLREDAREFTLVDIGTILGLAHLIPEGDRRWLVNSRIDLRTFNEIY
Number of Associated Samples	10
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.86 %
% of genes near scaffold ends (potentially truncated)	2.94 %
% of genes from short scaffolds (< 2000 bps)	0.98 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.314 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (96.078 % of family members)
Environment Ontology (ENVO)	Unclassified (96.078 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (64.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.08% β-sheet: 0.00% Coil/Unstructured: 63.92%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00078	RVT_1	7.92
PF00692	dUTPase	5.94
PF12796	Ank_2	3.96
PF00665	rve	3.96
PF07727	RVT_2	2.97
PF07690	MFS_1	0.99
PF04921	XAP5	0.99
PF01498	HTH_Tnp_Tc3_2	0.99
PF04082	Fungal_trans	0.99
PF04193	PQ-loop	0.99
PF00125	Histone	0.99
PF00385	Chromo	0.99
PF03732	Retrotrans_gag	0.99
PF03184	DDE_1	0.99
PF13358	DDE_3	0.99
PF05291	Bystin	0.99
PF08284	RVP_2	0.99
PF00465	Fe-ADH	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	5.94
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	5.94
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	3.96
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	3.96
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	3.96
COG4584	Transposase	Mobilome: prophages, transposons [X]	3.96
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.99
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.99
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.99
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
All Organisms	root	All Organisms	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
cellular organisms	root	All Organisms → cellular organisms	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	14.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	14.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	14.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Pezizomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Pezizales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Tuberaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	7.84 %
Morchellaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Tuber	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber	0.98 %
Morchella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.31 %
Tuber borchii	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii	0.98 %
Morchella sect. Distantes	section	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300028786\|Ga0307517_10000427	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	72206	Open in IMG/M
3300028786\|Ga0307517_10000626	Not Available	60508	Open in IMG/M
3300028786\|Ga0307517_10000763	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales	55372	Open in IMG/M
3300028786\|Ga0307517_10000979	All Organisms → cellular organisms → Eukaryota	48385	Open in IMG/M
3300028786\|Ga0307517_10001540	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	38423	Open in IMG/M
3300028786\|Ga0307517_10020519	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes	8410	Open in IMG/M
3300031456\|Ga0307513_10001989	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	28938	Open in IMG/M
3300031456\|Ga0307513_10003499	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	21261	Open in IMG/M
3300031456\|Ga0307513_10004526	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	18534	Open in IMG/M
3300031456\|Ga0307513_10013824	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii	9894	Open in IMG/M
3300031507\|Ga0307509_10000381	Not Available	74827	Open in IMG/M
3300031507\|Ga0307509_10000911	Not Available	50545	Open in IMG/M
3300031507\|Ga0307509_10001046	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales	47500	Open in IMG/M
3300031507\|Ga0307509_10001141	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	45422	Open in IMG/M
3300031507\|Ga0307509_10001163	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	45002	Open in IMG/M
3300031507\|Ga0307509_10001358	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales	41419	Open in IMG/M
3300031507\|Ga0307509_10003592	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	23312	Open in IMG/M
3300031507\|Ga0307509_10004115	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae	21273	Open in IMG/M
3300031507\|Ga0307509_10011099	Not Available	10970	Open in IMG/M
3300033179\|Ga0307507_10007276	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales	16216	Open in IMG/M
3300033180\|Ga0307510_10199153	Not Available	1540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.08%
Environmental	Environmental	3.92%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	96.08%
Terrestrial	Environmental → Terrestrial	2.94%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	96.08%
Soil	Environmental → Terrestrial → Soil	2.94%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	96.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	96.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%

Habitat	Taxonomy	Distribution
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	96.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066687_109117742	3300005454	Soil	MLMAVNSGHLSDIHGLVTVQLREDARAFTVVDIRTILGLAYLIPETDRHWLVNSRIDL*
Ga0137452_12516011	3300011441	Soil	YRLACIQKLNALDSGRPSEFHDLVTVQLRPDARKFTIVEIGTILGLAHLIPEGDQRWLVNSRINLRTFNEIY*
Ga0137359_101495031	3300012923	Vadose Zone Soil	MNVVNSGRPSDVHGLVTVHLRDDARELTIVDIGTILGLAHLIPETNRRWLVNTRIDLRTFNEIY*
Ga0247666_11059191	3300024323	Soil	NHGCPSDVHGLVTVQLSDTAREFTIIDIGTILGLAHLIPETDRRWLVNNRIDLRTFNEIY
Ga0307517_1000042724	3300028786	Ectomycorrhiza	VRHVTGIPLLTPVNSGQLSDLHGLVTGQMREDSQGFTIVDIGTILGRAHLIPEEDRRWLVNSRIDLRTFNEVY
Ga0307517_1000062627	3300028786	Ectomycorrhiza	MSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIRTIIGLGHLIRETERRWLVNSQIDLRMFNEIN
Ga0307517_1000076371	3300028786	Ectomycorrhiza	MSLVDSGLPEDVHGLVAVQLRDVTRELTIVDNGTILGLAHLIPETERRWLINSRIDLRMFSENY
Ga0307517_100009799	3300028786	Ectomycorrhiza	VSSSWSSDIHSHVTFQLREVAQEFILVDIGTILSLAPLIPEGDWRSLVNTGIDLRMFNEI
Ga0307517_1000143633	3300028786	Ectomycorrhiza	MFSSVNSGRPSDIPRLVAVQLREDAGEFTLVDKGTILSLAHLFPEVDRRWLVNSHIDLRMLNEIY
Ga0307517_1000154035	3300028786	Ectomycorrhiza	VRRVARVQLLTPVNSGRLSDLHGLVTVQMREDTRGFTLVDIGTILGLAHLIPEEDRRWLVNSRIDLTTFNEVD
Ga0307517_1000431714	3300028786	Ectomycorrhiza	MLSPVNSCQPSDIHSLVTVQLREDAREFTLVDIGTILGLAHLIPKGDRRWLVNSRIDLRTFNEIY
Ga0307517_1000627415	3300028786	Ectomycorrhiza	MLSPVNSGRPSDIHSLVTVQLTEDGREVTLGDIGTILGLAHLIPEGDRRWLINSRIDLRTFNEIH
Ga0307517_1000640027	3300028786	Ectomycorrhiza	MLSPVNSGRPSDIHSLVTVQLREDAREFTLVDIGTILSLAHLIPEGDRRWLVNSRIGLRTFNEIY
Ga0307517_100097843	3300028786	Ectomycorrhiza	MLTSVNSGRLSGLHGLVTVQMMEDTRGFTILDIGTILGLAHLIPEEDRHWLVNRRIDLRTFNEVY
Ga0307517_100120907	3300028786	Ectomycorrhiza	MSLVDSGRPSHVHGVVTIQLRELTRQLTIVDIWAIIGLAHLIPDTERRWLVNSRMDLRTFNEI
Ga0307517_100141614	3300028786	Ectomycorrhiza	MSLVDSGRPSEVHGLVTVQHRDVTCELTIVDIGRIIGLAHLIPETERRWLVNSRIDLRTFNEIYEDL
Ga0307517_1001589212	3300028786	Ectomycorrhiza	HGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNSRIDLRTFNEIY
Ga0307517_100176421	3300028786	Ectomycorrhiza	MQQDTVYRLAGVQFMSLVGAGRPSDIHRLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNSRINLRTFNEIY
Ga0307517_100181256	3300028786	Ectomycorrhiza	VRRVASVQLLTPVNSGRLSDLHGLVTVLMREDTRGFTIVDIGTILGLAQLIPEEDRRWLGNSRIDLRTLNEVY
Ga0307517_100205191	3300028786	Ectomycorrhiza	LVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNSRIDLHTFNKIY
Ga0307517_100281755	3300028786	Ectomycorrhiza	VNSGRLSDLHGLVTVQVREDMRGFTIEDIGTILGLAHLIPEDDRRWLVNSRIDLSTFNEV
Ga0307517_100765316	3300028786	Ectomycorrhiza	PVNSGRLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIPEGDRLWLVNSRIDLRTFNEVY
Ga0307515_100612406	3300028794	Ectomycorrhiza	MQQDTVYRLAGVQFMSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTSLGLAHLIAETHQRWLVNSRIDLGRFNEISYDR
Ga0307515_100880175	3300028794	Ectomycorrhiza	MLSSVNSGRPSDIPRLVAVQLREDAGEFTLVDKGTILSLAHLFPEVDRRWLVNSHIDLRMLNEIY
Ga0307515_101102324	3300028794	Ectomycorrhiza	MSLVDSGRPSDVHRLVTVQLTDVTRELTIVDIGTIIGLAHLIRETERRWLVNSQIDLRMFNEIY
Ga0307515_101205862	3300028794	Ectomycorrhiza	MRRLAGVQMLSPVNSGRLSDMHSLVTVQLRQAAQEFTIVDIGTILGLAHLIPEGDLRWVFNSRIDLRTFNKIY
Ga0307515_101206403	3300028794	Ectomycorrhiza	MSLVDSGRLSEVHSLVTVQLRDVTRELIIVDIGMIFCLGHLIPETERPWLVHSRIDLRTFNEIY
Ga0307515_101455602	3300028794	Ectomycorrhiza	VHRVAGVQLLTPVNSGRLSDLHGLVTVQIREDRRGFTIVNIGTILGLAHLIPEQDRRWLVNSWIDLSTFNEVY
Ga0307515_101763964	3300028794	Ectomycorrhiza	MHQDAVYPLAAVQFLSLVHSGQRSDVDCLITVQLRDRTRELTIVDIGTILSLAHQIPETVWCWLVNTPIDLRTLNEIY
Ga0307515_102170201	3300028794	Ectomycorrhiza	HSLVTVQLREDAREFTLLDLGSILGLAHLIPEGDRRWLVNSRIDLRTFNEIY
Ga0307515_102202301	3300028794	Ectomycorrhiza	MSVVDSGRPSDVHGMVTVQLRNVTRELTIVDIGTIIGLAHLIPETERRWLVNSWIDLRTFNEIY
Ga0307515_103840982	3300028794	Ectomycorrhiza	MFSPVNSGRPSDIHSLVTVQLREDAREFTLVDIGTIVGLAHLIPEGDWGRVVNRPIDFRTFNEIY
Ga0307515_103905101	3300028794	Ectomycorrhiza	SERLYDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIREEDRRWLVNSRIDLRSFNEVY
Ga0307515_105081791	3300028794	Ectomycorrhiza	SDIHSLVTVQLGQDAPEFTLVDIGRILGLAHLIPEGDRHWLVNSRIDFRTFNEIY
Ga0307515_107529951	3300028794	Ectomycorrhiza	GYMQQDTVYPLAGVQFMSLVDSGRPSDVHGLVTVQLRDFTRELTIVDIGTIIGLAHLIPETERRWLVNSRIDLRTFNEIY
Ga0307515_107809622	3300028794	Ectomycorrhiza	VYRLAGVQFMSLVNSGGPSDVHGLVTVQLRDVTREVTFVNIERILGLAHLIPEAEQPWIVNSRIDLRTLTRSIRITVWACIIK
Ga0307513_1000081732	3300031456	Ectomycorrhiza	MQQDTVYRLAGVQFLSLVDSSRPSDVHGLVTVQLRDITRDLTMVDIGRILGLAHLIPETDRRWLVNSRIDLRTFNAIY
Ga0307513_1000084816	3300031456	Ectomycorrhiza	MQPDTVYRLARVQFMSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTIIGLVHLIPETEWRWLVNRRIDLHTFNEIY
Ga0307513_1000198920	3300031456	Ectomycorrhiza	MQQDTVYRLAGVQFMSVVHSGRPSEVHGLVTIQLRGVTRELTILDIWTIISIAHGIPKIDRHWLVNSKIYLSTLNEIY
Ga0307513_1000349910	3300031456	Ectomycorrhiza	MPQDTVSRLARVQFMSLVDSGRPSDIPILVTFQLRDVTAELTIVDIVTIVGLGNLIPETERPWLVNSRINLRMFNEIY
Ga0307513_100045266	3300031456	Ectomycorrhiza	MRQDTVYLLGGVQFMSQVDSGRPSDVDDLVTVPLRDVTRELTIRYIGTILGLVPLIPQTDWRWLVNSRIDLRTFNEIS
Ga0307513_100066198	3300031456	Ectomycorrhiza	MSLVDSGRPSDVHGLVTVQLTDVTRELTIVDIGTIIGLAHLIRETERRWLVNSQIDLRMFNEIY
Ga0307513_100134551	3300031456	Ectomycorrhiza	VRRLAGVQMLSPVNSGRPSDIHSLVTVQLREDAREFTLVDIGTILGLAHLIPEGDRRWLVNSRIDLRTFNEIY
Ga0307513_100138246	3300031456	Ectomycorrhiza	MSLIDSRRPSDEHILVTGQVKDVTRELTIVDIGTISALTHLIPETERCWLVNSWIDLRMFDDIY
Ga0307513_100360556	3300031456	Ectomycorrhiza	MLTPVNSGILSDLHGLITVQMREHTRGFTIVDIGTILGLAHLIPEEDRRWLVNSRIDLRIFNEVY
Ga0307513_103983402	3300031456	Ectomycorrhiza	TPVNSGRLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIPEEDRRWLVNSRIDLRTFNEVY
Ga0307513_105705151	3300031456	Ectomycorrhiza	MLTTVNSRQLSDIHGLVTGQIREDTQGFKMVDIGTILGLVYLILEEDQCWLVNTWINRRTINEIY
Ga0307513_107935421	3300031456	Ectomycorrhiza	NSGRLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIPEEDQRWLVNSRIDLRTFNEV
Ga0307509_1000038143	3300031507	Ectomycorrhiza	MSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTTIGLAHLILETERRWLVNSRIDLRMFNEIY
Ga0307509_1000046440	3300031507	Ectomycorrhiza	MSVVNQGYPSDVHGLVIVQLSDFPLSFTIVDIGKILSLAHLIQETDNRWLVNNRIDLRTFNEIY
Ga0307509_1000091145	3300031507	Ectomycorrhiza	MLSPVSSGRSSDIHSLVTVQLREDAREFTLVDIVTILGLAHLIPEGNRGGLSNSRIDLRTFNEID
Ga0307509_1000096245	3300031507	Ectomycorrhiza	MSLVDCGRLSDVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETEWRWLVHSQIDLRTFNDIY
Ga0307509_1000104667	3300031507	Ectomycorrhiza	VNSGRPSNIHSLVTDQLREDAGEYTFIDIQTILALADLIPAGDRRWLVNSRTDLRTFNKINE
Ga0307509_100011417	3300031507	Ectomycorrhiza	MSVVKQGCPSDIHGLVTVQLSQFAREFTIVNIGTLLSLAHLIPETDRHWIVNNRIDLRMFNEIY
Ga0307509_1000116353	3300031507	Ectomycorrhiza	DVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNIQIDLHTFNEIY
Ga0307509_1000116739	3300031507	Ectomycorrhiza	VRRLAGVRSVSAVNSGRISDVHSLVTVQMKKDAREFTVVDIGTILGLAHLISDGDRRWIFNSRIDLRISNEVY
Ga0307509_1000135827	3300031507	Ectomycorrhiza	VISGRAYDIHSLVTVQLREDSREFTLVDILTILSLAPLIPEGHQRWLNSRLDLKTFNEIY
Ga0307509_1000173735	3300031507	Ectomycorrhiza	VRRLAGVQFVSAANSGRISDVHSLITVQMKVDALEFTVVDIGTILGLAHLIPEGDRRWIVNSRIDLRTFNKVY
Ga0307509_100017619	3300031507	Ectomycorrhiza	MLSSVNSGRPYDIPRLVAVQLREDAREFTLVDKGTILSLAHLFPEVDRYWLVNSHIDLRMLNEIY
Ga0307509_1000198334	3300031507	Ectomycorrhiza	VRRLPGVQFASAVNSGRISDIHSLVTVQMKEDAREFTVVDIGTILGLAHLIPEGDRRWIVNSRINWRTFNEVY
Ga0307509_1000299313	3300031507	Ectomycorrhiza	VVHQGCPSDIYGLVTVQLSDFVWEFTIVDIWTILNLAHLIAETACPWLLNNRIDLRAFNEIY
Ga0307509_1000359216	3300031507	Ectomycorrhiza	MSLVDSRRPSDDHILVTGQLKDVTRELTIVDIGTILGLTHLIPETERCRLVHSRIDLRMFDEIY
Ga0307509_1000411524	3300031507	Ectomycorrhiza	MSLVDSGRPLDIHGLVTVQLRDVTRQLTIVDIGTILGLTHLIPETERRWLVNSTIDLRTFNEIY
Ga0307509_1000458314	3300031507	Ectomycorrhiza	VDVHGLVTVELSDFTREFTIVDIRTILSLAHLILETDPHWLVNNRIDVRTFNEIY
Ga0307509_100047376	3300031507	Ectomycorrhiza	MQQDTVYRLAGVQFMSLVDSGRLSDVHGLVTVELRDDTRELTIVDIGTSLGLAHLIAETHRRWLVNSRIDLGRFNEISYHC
Ga0307509_1000498720	3300031507	Ectomycorrhiza	VRRLAGVQFVRGVNSGRISDVHSLVTIQMKEDAREITVVDIGTIIGLAHLIPVGERRWIVNSRIDKRTFNEVY
Ga0307509_1000507711	3300031507	Ectomycorrhiza	VHRLAIVQFVSAVNSGPIFDVHSLVTVQIKEDVREFTVVDIGTILGQVHLIPEGDRRWIVNRRINLRTFNELY
Ga0307509_100052191	3300031507	Ectomycorrhiza	VRRLAGVQFVSAMNSGRISDVHSLVTDQMKEDACEFTVVDIGTILGLAHLIPDGDRRWIVNSRIDLRTFNEAY
Ga0307509_1000680619	3300031507	Ectomycorrhiza	MSVVNQGGPSDLHGLVTVQLSDFTRKFTIVDIRTILSLAHLILETDGCWLVNNPIDLRTFNEIY
Ga0307509_100091337	3300031507	Ectomycorrhiza	MQQDMVYRLARVQVMSRVDSAQASEVHGLVTIQLRDVTRELTIVDIGTILGLSHLIPETDRRWLVNSWINLCRFNDIY
Ga0307509_100110991	3300031507	Ectomycorrhiza	QFMSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIREIERRWLVISRIDLRTFNEIY
Ga0307509_100154311	3300031507	Ectomycorrhiza	QLLTPVNSGRLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHVIPEEDQRWLVNSRSDLRTFNEVY
Ga0307509_1001799210	3300031507	Ectomycorrhiza	MLSPVNSGRPSDIQTLVTVQPREDAREFTLVDIGTILSLAHLIPEGDRRWLVNSRIHLRTFNEIY
Ga0307509_100179924	3300031507	Ectomycorrhiza	MQQDTVYRLAGFQFMSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGAIIGLAHLIPQTERRWLVNSQIDLRPFNEIG
Ga0307509_100191034	3300031507	Ectomycorrhiza	VNSGRISDIYSLVTVQMKEDAQEFTVVDIGTILGLAHLIPEGDWRWIVNGRIDWRTFNEV
Ga0307509_100300845	3300031507	Ectomycorrhiza	VNSGRISDVHSLVTVQIKEDAWEFTVVDIGTSLGLAHLIPEGDRRLIVNSRIDLRTFKKV
Ga0307509_100344021	3300031507	Ectomycorrhiza	NSGRLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIPEEDRRWLVNSRIDLRTFNEVY
Ga0307509_100431647	3300031507	Ectomycorrhiza	VRRVAGVQLLTPVNSGCLSDLHGLVTVQMREDTRGFTIVDIGTILGLAHLIPEEDRRWLVNSRIDLRKFNEVY
Ga0307509_100451631	3300031507	Ectomycorrhiza	MLTPVISRSPSDVHGLVAIQRMEDTRGFTVLDMGTILGLMHLIPEEDRRWLANSRIDLRTFNAVH
Ga0307509_101401461	3300031507	Ectomycorrhiza	NSGRPSDIHSLVTVQLREDAREFTLVDIGTILGLAHLIPEGDLRWLVNSRIDLRTFNKIY
Ga0307509_103421442	3300031507	Ectomycorrhiza	VRRVAGLQLLTPVNSGRLSDLHGLVTVQMREDTGGFTIVDIGTILGLAHLILEEDRRWLVNSRIDLRTFNEVH
Ga0307507_100072763	3300033179	Ectomycorrhiza	VRRVMAVRMLSAVNSGFPSDIHGRVTVQMREETRDFRIVDVGTIDGLAHMIPEGERRWLVNSRIDLRTFNEVY
Ga0307507_100090642	3300033179	Ectomycorrhiza	MMSVVNSGRPSEVHGLVTVQLREDAREWTIVDIGTILVLAHLIPEKTDRRWIVNIRIDLRPFNEIY
Ga0307507_1001025614	3300033179	Ectomycorrhiza	VRRVVAVRMLSAVNSGFPSDIHGLVTLQMREDAPKFMIVDVGTIHGLAHLIPEGDRRWLVNSRIDLRTFNEVY
Ga0307507_100141077	3300033179	Ectomycorrhiza	MLSAVNLGFPSDIHGLVTVQIRQDAREFTIVDVETIQGLAHLIPEGERCSLVNSRIDLRMFS
Ga0307507_100452742	3300033179	Ectomycorrhiza	MLSAVNSGFPSNIHGLVTVQMREDAREFTIVDVEIIHGLAHLIPEEERRWLVQGRIDLRTFNQVY
Ga0307510_100013371	3300033180	Ectomycorrhiza	MSLVDTRRPSDEHILVTGQLKDVTRELTIVDIGTILRLTHLIPEIERCLLVHSRIDLRMFDEIY
Ga0307510_1000601610	3300033180	Ectomycorrhiza	MLSPVNSGRPFDIHSLVMVQLREDAREFTLVDIGTILGLAHLIPEGDRRWLFNSRIDLRPFNESY
Ga0307510_100199075	3300033180	Ectomycorrhiza	MSLVDSGRPLDIHGLVTVPLRDVTRQLTIVDIGTILGLTHLIPETERRWLVNSTIDLRTFNEIY
Ga0307510_100281247	3300033180	Ectomycorrhiza	VTLVNSGRVSDLHGLVTVQTREDTQGFTMVDIGTILGLAHLIAEEDRRWLVNSRIDLRAFNDGY
Ga0307510_100286436	3300033180	Ectomycorrhiza	MQQDTVYRLAGVQFMSLVDSGRPSDVHGLVTVQLRDVTRELTIVDIGTSLGLAHLIAETHRRWLVNSRIDLGRFNEISYDR
Ga0307510_100352999	3300033180	Ectomycorrhiza	DTVWRLAGVQILSPVSSGRSSDIHSLVTLQLREDAREFTLFDIVTILGLAHLIPEGDRRGLSNSRIDLRTFNEID
Ga0307510_100483281	3300033180	Ectomycorrhiza	VQMLSPVNSGRPSDIHSLVTVQLREDAREYTLVDIGTILGLAHVIPEGDRRWLVNSRIDLRTFNEIY
Ga0307510_100486567	3300033180	Ectomycorrhiza	LTPVNSGRLSDLHGLVTVQMREDTQGFTIVDIGTILGLAHLIPEEDRRWLVNSRIDLRTFNEVY
Ga0307510_101161873	3300033180	Ectomycorrhiza	MQQDTVYRLAGVQFMSQADSGRPSDVHGLLTVQLRDLTRELTIVDIGTIIGLAPLIPETERRWLVNSRIDLRTFNEIY
Ga0307510_101275822	3300033180	Ectomycorrhiza	AGVQMLSPVNSGRPSDIHSLVTVQLREDAREFTLVDIGTILGLAHLIPEGDRRWLVNSRIDLRTFNEIY
Ga0307510_101480792	3300033180	Ectomycorrhiza	MQQDTVYRLAGVQFMSLVDSGRPSDVHGLVSVQVRDVTRDLTIVDIGTIIGLAHLIPQTERRWLVSSRIDLRTFNEIY
Ga0307510_101746701	3300033180	Ectomycorrhiza	MQQDTVYLLAGVQFMSQVDSGRPLDVDGLVTVPLRDVTRELTIGYIRTIVGLAPLIPETDWRWLVNSRMDLHTFNEIY
Ga0307510_101991531	3300033180	Ectomycorrhiza	MHGTLRTHIIIFADVHGLVTVQMTEDTRGFTIVDIGTMLGLAHLIPEEDRRWLVNSRIDLRTLNEVY
Ga0307510_103065231	3300033180	Ectomycorrhiza	VLAGVQMLSPVNSGRPSDIDSLVTVQLREDAREFTLVDIGTILGLAHLIPEGDRRWLVNSRIDLRTFNQIC
Ga0307510_105490002	3300033180	Ectomycorrhiza	VDSGRPSDVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNSRIDLRTFNEI
Ga0307510_106061132	3300033180	Ectomycorrhiza	LAGVQFKSLVDSGQPSDVHGLVTVQLRDVTRELTIVDIGTIIGLAHLIPETERRWLVNSRIDLRTFNEIY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences