Metagenome Family F100067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100067
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	MIDSASKHLGAXLQSIPMVHPSAFYKWIKDKLNAFNYAYILLLKQVG
Number of Associated Samples	4
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.43 %
% of genes near scaffold ends (potentially truncated)	21.57 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (94.118 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07727	RVT_2	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
All Organisms	root	All Organisms	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
cellular organisms	root	All Organisms → cellular organisms	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	0.98 %
rosids incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Vitales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales	0.98 %
Brassicales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Vitaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae	0.98 %
Brassicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Camelineae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae	0.98 %
Viteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Vitis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis	0.98 %
Arabidopsis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.12 %
Arabidopsis thaliana x Arabidopsis arenosa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana x Arabidopsis arenosa	0.98 %
Vitis vinifera	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005562\|Ga0058697_10103561	Not Available	1184	Open in IMG/M
3300005562\|Ga0058697_10196669	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	911	Open in IMG/M
3300005562\|Ga0058697_10257140	Not Available	816	Open in IMG/M
3300005562\|Ga0058697_10259255	Not Available	814	Open in IMG/M
3300005562\|Ga0058697_10312015	Not Available	753	Open in IMG/M
3300005562\|Ga0058697_10410186	Not Available	674	Open in IMG/M
3300005562\|Ga0058697_10680034	Not Available	545	Open in IMG/M
3300005562\|Ga0058697_10688551	Not Available	543	Open in IMG/M
3300005562\|Ga0058697_10730517	Not Available	529	Open in IMG/M
3300005562\|Ga0058697_10771184	Not Available	518	Open in IMG/M
3300005562\|Ga0058697_10775153	Not Available	516	Open in IMG/M
3300005562\|Ga0058697_10808317	Not Available	507	Open in IMG/M
3300005661\|Ga0058698_10081876	Not Available	1681	Open in IMG/M
3300005661\|Ga0058698_10112803	Not Available	1470	Open in IMG/M
3300005661\|Ga0058698_10146148	Not Available	1316	Open in IMG/M
3300005661\|Ga0058698_10228966	Not Available	1080	Open in IMG/M
3300005661\|Ga0058698_10230342	Not Available	1078	Open in IMG/M
3300005661\|Ga0058698_10254197	Not Available	1031	Open in IMG/M
3300005661\|Ga0058698_10255398	Not Available	1028	Open in IMG/M
3300005661\|Ga0058698_10291465	Not Available	967	Open in IMG/M
3300005661\|Ga0058698_10303608	Not Available	950	Open in IMG/M
3300005661\|Ga0058698_10321311	Not Available	925	Open in IMG/M
3300005661\|Ga0058698_10323053	Not Available	922	Open in IMG/M
3300005661\|Ga0058698_10326553	Not Available	918	Open in IMG/M
3300005661\|Ga0058698_10424695	Not Available	810	Open in IMG/M
3300005661\|Ga0058698_10433718	Not Available	802	Open in IMG/M
3300005661\|Ga0058698_10441546	Not Available	795	Open in IMG/M
3300005661\|Ga0058698_10449979	Not Available	787	Open in IMG/M
3300005661\|Ga0058698_10464480	Not Available	775	Open in IMG/M
3300005661\|Ga0058698_10466815	Not Available	773	Open in IMG/M
3300005661\|Ga0058698_10473027	Not Available	768	Open in IMG/M
3300005661\|Ga0058698_10483193	Not Available	761	Open in IMG/M
3300005661\|Ga0058698_10558797	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	708	Open in IMG/M
3300005661\|Ga0058698_10561547	Not Available	707	Open in IMG/M
3300005661\|Ga0058698_10581671	Not Available	694	Open in IMG/M
3300005661\|Ga0058698_10598671	Not Available	684	Open in IMG/M
3300005661\|Ga0058698_10609131	Not Available	679	Open in IMG/M
3300005661\|Ga0058698_10627088	Not Available	669	Open in IMG/M
3300005661\|Ga0058698_10632871	Not Available	666	Open in IMG/M
3300005661\|Ga0058698_10646552	Not Available	659	Open in IMG/M
3300005661\|Ga0058698_10660756	Not Available	651	Open in IMG/M
3300005661\|Ga0058698_10670484	Not Available	647	Open in IMG/M
3300005661\|Ga0058698_10715587	Not Available	626	Open in IMG/M
3300005661\|Ga0058698_10740330	Not Available	615	Open in IMG/M
3300005661\|Ga0058698_10755440	Not Available	608	Open in IMG/M
3300005661\|Ga0058698_10772326	Not Available	602	Open in IMG/M
3300005661\|Ga0058698_10790326	Not Available	594	Open in IMG/M
3300005661\|Ga0058698_10792673	Not Available	593	Open in IMG/M
3300005661\|Ga0058698_10797445	Not Available	592	Open in IMG/M
3300005661\|Ga0058698_10811057	Not Available	587	Open in IMG/M
3300005661\|Ga0058698_10814648	Not Available	585	Open in IMG/M
3300005661\|Ga0058698_10890750	Not Available	559	Open in IMG/M
3300005661\|Ga0058698_10891534	Not Available	558	Open in IMG/M
3300005661\|Ga0058698_10891770	Not Available	558	Open in IMG/M
3300005661\|Ga0058698_10897703	Not Available	556	Open in IMG/M
3300005661\|Ga0058698_10899962	Not Available	556	Open in IMG/M
3300005661\|Ga0058698_10903950	Not Available	554	Open in IMG/M
3300005661\|Ga0058698_10910240	Not Available	552	Open in IMG/M
3300005661\|Ga0058698_10919747	Not Available	549	Open in IMG/M
3300005661\|Ga0058698_10964684	Not Available	536	Open in IMG/M
3300005661\|Ga0058698_10969979	Not Available	534	Open in IMG/M
3300005661\|Ga0058698_11039320	Not Available	515	Open in IMG/M
3300005661\|Ga0058698_11057906	Not Available	511	Open in IMG/M
3300030692\|Ga0268250_10106989	Not Available	1201	Open in IMG/M
3300030692\|Ga0268250_10117575	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana x Arabidopsis arenosa	1156	Open in IMG/M
3300030692\|Ga0268250_10142278	Not Available	1074	Open in IMG/M
3300030692\|Ga0268250_10148544	Not Available	1055	Open in IMG/M
3300030692\|Ga0268250_10182116	Not Available	973	Open in IMG/M
3300030692\|Ga0268250_10184347	Not Available	969	Open in IMG/M
3300030692\|Ga0268250_10209613	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	920	Open in IMG/M
3300030692\|Ga0268250_10218258	Not Available	905	Open in IMG/M
3300030692\|Ga0268250_10311761	Not Available	781	Open in IMG/M
3300030692\|Ga0268250_10311916	Not Available	781	Open in IMG/M
3300030692\|Ga0268250_10312000	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → rosids incertae sedis → Vitales → Vitaceae → Viteae → Vitis → Vitis vinifera	781	Open in IMG/M
3300030692\|Ga0268250_10323794	Not Available	769	Open in IMG/M
3300030692\|Ga0268250_10342919	Not Available	751	Open in IMG/M
3300030692\|Ga0268250_10343775	Not Available	750	Open in IMG/M
3300030692\|Ga0268250_10357157	Not Available	738	Open in IMG/M
3300030692\|Ga0268250_10447272	Not Available	671	Open in IMG/M
3300030692\|Ga0268250_10450287	Not Available	669	Open in IMG/M
3300030692\|Ga0268250_10469518	Not Available	657	Open in IMG/M
3300030692\|Ga0268250_10481111	Not Available	650	Open in IMG/M
3300030692\|Ga0268250_10524929	Not Available	626	Open in IMG/M
3300030692\|Ga0268250_10538201	Not Available	619	Open in IMG/M
3300030692\|Ga0268250_10572856	Not Available	603	Open in IMG/M
3300030692\|Ga0268250_10618563	Not Available	582	Open in IMG/M
3300030692\|Ga0268250_10721100	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	543	Open in IMG/M
3300030692\|Ga0268250_10721697	Not Available	543	Open in IMG/M
3300030692\|Ga0268250_10749267	Not Available	534	Open in IMG/M
3300030692\|Ga0268250_10755326	Not Available	532	Open in IMG/M
3300030692\|Ga0268250_10781608	Not Available	524	Open in IMG/M
3300030692\|Ga0268250_10788949	Not Available	522	Open in IMG/M
3300030692\|Ga0268250_10790163	Not Available	521	Open in IMG/M
3300030692\|Ga0268250_10808666	Not Available	516	Open in IMG/M
3300030692\|Ga0268250_10832360	Not Available	509	Open in IMG/M
3300030692\|Ga0268250_10850800	Not Available	504	Open in IMG/M
3300030692\|Ga0268250_10855071	Not Available	503	Open in IMG/M
3300030692\|Ga0268250_10855295	Not Available	503	Open in IMG/M
3300032159\|Ga0268251_10152063	Not Available	873	Open in IMG/M
3300032159\|Ga0268251_10210851	Not Available	766	Open in IMG/M
3300032159\|Ga0268251_10320915	Not Available	648	Open in IMG/M
3300032159\|Ga0268251_10365643	Not Available	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phylloplane	Host-Associated → Plants → Phylloplane	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005661	Agave microbial communities from Guanajuato, Mexico - As.Sf.e	Host-Associated	Open in IMG/M
3300030692	Agave microbial communities from Guanajuato, Mexico - As.Sf.e (v2)	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058697_101035611	3300005562	Agave	MIDSASKHVGAHQSIFMVQPSAFYKWNKNKLNAFNDAYILLLKQVG
Ga0058697_101966692	3300005562	Agave	MIDSTIKHLGALQLILMVHPSAFYKWIKDKLNAFNDAYILLLK
Ga0058697_102571403	3300005562	Agave	GALQSISKVHTSAFYKWIKDKLNAFNDAYILLLNKWSRADYS
Ga0058697_102592552	3300005562	Agave	MIDSASNHLGALQSIRRVHTGAFYKWIKDKINAFNDAYILLLKHVE
Ga0058697_103120152	3300005562	Agave	MIDSASKHLGLDSNPFLRCTQVFYKWIKDKLNAFNDAYILLLKQVG*
Ga0058697_104101861	3300005562	Agave	MIHSASKHVGVLQSIYVVHPSAFYKWIKDNLNAFNDAYILLL
Ga0058697_106800342	3300005562	Agave	MIDSVSKHLGATPIIPMVHPNAFYQWIKDKFNAFNDVYILLLKQVG*
Ga0058697_106885512	3300005562	Agave	QAQEKKLVMIDSASKHLGAWLQPIPMVHPSAFTSELDKLNVFNDVHILLLKQVG*
Ga0058697_107305171	3300005562	Agave	MIDSASKHLGALQSIPKVHTSAFYKWIKDKLNAFNDAYILL
Ga0058697_107711842	3300005562	Agave	MIDSESKHLGLAPTSSCGAPSAFYKWIKDKLNTFSDAYILSLKQVGVE*
Ga0058697_107751531	3300005562	Agave	MIDSASKQLGALQSIPKVHTSAFYKWIKDKLNAFNDAYIL
Ga0058697_108083172	3300005562	Agave	VMIDSASKHLGALQSIPKVHISTFYKWIKNKLNAFNDAYILLLNKSRIDYS*
Ga0058698_100818762	3300005661	Agave	MINSVSKHLGALQPISVVRPSAFYKIKDKLNAFNDAYVLLL*
Ga0058698_101128031	3300005661	Agave	MIDFAGKHLGDGLQPIPVVHPSVFYKWIKDKLNTFNVAYILLLKQVG*
Ga0058698_101461482	3300005661	Agave	MIDSTSKHLGALQLIPVMHPSAFYKWINDKLNTFNDAYILLL
Ga0058698_102289663	3300005661	Agave	MIDSVSKHLGVLQSILMMHTSAFYKWIKDKLNAFNDAYILLLKQVG
Ga0058698_102303422	3300005661	Agave	MIDSASKHLGAIPTILVVHPSAFYKWIKDKLNAFNDA*
Ga0058698_102541972	3300005661	Agave	MIDSASKHLGALQPIPVVHPIAFYKWINDKLNAFNDAYILLLKQVGVE
Ga0058698_102553983	3300005661	Agave	MIDSASKHLGALQSIPKVHTSAFYKIKDKLNAFNDAYIFLLKQVE*
Ga0058698_102914652	3300005661	Agave	MIDSASKHLGGLLQSIPKVHISAFYKWIKDKLNAFNDAYILLSKQVE*
Ga0058698_103036082	3300005661	Agave	MIDSASNHLEALQPIPVVHPSAFYKWIKDKFNAFNDAYILLLQQMG
Ga0058698_103213111	3300005661	Agave	MIDSTSKHLGALQPIPMVHPSAIYKWIKDKLNVFNVAYILLLKQVGVE
Ga0058698_103230533	3300005661	Agave	MIDLASKHLGYLTQSIPKVHISAFYKWIKDKLNAFNDTYILLLNKWSRVDYS*
Ga0058698_103265532	3300005661	Agave	SKHLGALQPIPVVHPSAFYKWNKDNLNAFNDAYILLL
Ga0058698_104246951	3300005661	Agave	MIDFASKHLGALLQPISVVHPSAFYNGMDKLNVFNNANILLLQKVG*
Ga0058698_104337181	3300005661	Agave	MIDSVSKHLEA*LQSIPMVHPSAFYKWIKDKLNAFNDAYIL
Ga0058698_104415461	3300005661	Agave	MIDSESKHLGARLQPIPMVHPSAFYKWKDKLNAFNDAYI
Ga0058698_104499792	3300005661	Agave	MIDSASKHLGALQSIPKVRISTFYKWIKDKLNAFNDAYILLLNKWSRVDYS
Ga0058698_104644801	3300005661	Agave	MIDSASKHLGALQSIPKVHTSAFYKIKDKLNAFNDAYILLKQVE*
Ga0058698_104668151	3300005661	Agave	MIDSASKHLGALQSIPKAHTSAFYKWIKDKFNAFNDAYILLLNKWGRVDYF
Ga0058698_104730271	3300005661	Agave	MIDSASKHLGAWLQPIPVVHPSAYYKWIKDKLNAFNDAYILLLKQVG*
Ga0058698_104831932	3300005661	Agave	MIDSASKHLKALQLIHVVHQSAFYKWIKDKFNAFNVAYILLSKQVG
Ga0058698_105587971	3300005661	Agave	MIDSASKHLGA*LHSIPKVHTSAFYKWIKDKFNAFNDAYILLLKQVE
Ga0058698_105615471	3300005661	Agave	MIDSASKHSRALQSIPMVHPSAFYKRIKDKLNAFNDAYILLLKQVGVE
Ga0058698_105816712	3300005661	Agave	KHLGALQSIPKVHTSAFYKWIKDKLNAFNDSYILLLNK
Ga0058698_105986711	3300005661	Agave	KLVMIDSASKHLGALQPIPMVHPSAFYKWIKNKLNAFNDAYILLLKQVG
Ga0058698_106091312	3300005661	Agave	MIDSASKHLGALQPIPVVRPSAFYKWIKDKLNAFNDAYILLL
Ga0058698_106270881	3300005661	Agave	MIDSASKYLGALQLIPVVHPNAFYKLIKDKLNAFNDAYILFLK
Ga0058698_106328712	3300005661	Agave	MIDSASKHFGALQTIPMVHVSAFYKIKNKLNVFYDAYILLLKQVG*
Ga0058698_106465521	3300005661	Agave	KLVMIDSASKHLGALQPIPVVHPSAFYKGIKDKLNTFNVAYILLLK
Ga0058698_106607562	3300005661	Agave	MIDSASKHLGALQSIPKVHTSAFYKLIKDKLNTFNDAYILLLNKWSKVDYS
Ga0058698_106704841	3300005661	Agave	MIDSTSKHLGALQLIPMLHPSAFYKWIKDKLKAFNDAYILLLKQVG
Ga0058698_107155873	3300005661	Agave	SKHLGALQPIFMVHPSVFYEWIKNKLNAFNVAYILLLKQVG
Ga0058698_107403301	3300005661	Agave	VIDYVRKHLGDLLQPILMVHPSAFYKWILDKFNTFNNAYILLLQQVG*
Ga0058698_107554402	3300005661	Agave	MIDSASKHLGVLQSIPKVHTSAFYNIKDKLNAFNDAYILLLKQVE*
Ga0058698_107723262	3300005661	Agave	MIDSACKHLGALQPIPVVHPSAFDKWIKNKLNAFNVAYILLLKQVE
Ga0058698_107903262	3300005661	Agave	MIDSASKHLGALQSIPKVHTNTFYKWIKDNFNPFNDAYILLLNKWSRVDYS
Ga0058698_107926731	3300005661	Agave	MIDSASNHLGA*LQSIPKVHTSAFYKWIKDKLNAFNDA
Ga0058698_107974451	3300005661	Agave	MIDFTSKHLGSRLQLIPMVHSSAFYKCIKDKINAFNDAYILLLKQVR*
Ga0058698_108110572	3300005661	Agave	MIKSASKHLRARLQPILVVRASTFYKWIKDKLNTFNDAYILLL*
Ga0058698_108146481	3300005661	Agave	ASKHLGALQSIPKVHTSTFYKWIKDKLNAFNDAYILLLNKWSRVDYS
Ga0058698_108907502	3300005661	Agave	MIDSASKHLGALQSILKVHTSALYKWIKDKLNAFNNAYILLLKQVE
Ga0058698_108915341	3300005661	Agave	SKHLGALQSIPKVHTSAFYKWIKEKFNAFNDAYILLLNKWNRVDYT
Ga0058698_108917701	3300005661	Agave	MIDFVSKHLEALQSIPMVHPSAFYKWIKDKLNAFNDAYILLLKQVG
Ga0058698_108977032	3300005661	Agave	MIDSASKHLGALQSIPKVHISTFYKWIKDKLNVFNDAYILLLKQVE
Ga0058698_108999622	3300005661	Agave	MINLASKHLGALQPIPMVHPSAFYKWIKDKLNAFNDAYILLLKQVG
Ga0058698_109039501	3300005661	Agave	MIDSASKHLGALQSIPMVYQSALYKIKDKLNAFNDAYILSLK*
Ga0058698_109102401	3300005661	Agave	MIDSASKHLGALHSIPKVHTSAFYKWIKDKLNAFNDAYTLLLKQVE
Ga0058698_109197471	3300005661	Agave	MINSASKHLGALQSIRKVHTSAFYKWIKDKLNAFNDYYILLLKQVE
Ga0058698_109646841	3300005661	Agave	MIDNASKHLKTLQPIPVVHPSAFYKWIKDKLYAFNDVYILLLKQVG
Ga0058698_109699792	3300005661	Agave	ASKYLGALQSIPKVHTSAFYKWIKDKLNAFNDAYILLQNKWSRVDYS
Ga0058698_110393201	3300005661	Agave	MIDSASKHLGATQSILKVHTSAFYKWIKDKLNAFNDAYILLLK
Ga0058698_110579061	3300005661	Agave	MIDSVSKHLGALQSIPMVHSSAFYKWIKDKLNAFIDAYILLLKQVGRVDYF
Ga0268250_101069892	3300030692	Agave	MIDSASKHLGAXLQSIPKVHISAFYKWTKNKLNAFNDAYILLLNKWSRLDYS
Ga0268250_101175752	3300030692	Agave	MIDSASKHLGAXLQSIPKVHTSAFYKLIKDKLNTFNDAYILLLNKWSKVDYS
Ga0268250_101422781	3300030692	Agave	MIDSTSKYSGAXLQHIPMVHPSAFYKKALDKLNAFNDAYILLSKQVG
Ga0268250_101485441	3300030692	Agave	MINSVSKHLGAXLQPISVVRPSAFYKXIKDKLNAFNDAYVLLL
Ga0268250_101821161	3300030692	Agave	MIDSASKHLGGLLQSIPKVHISAFYKWIKDKLNAFNDAYILLSKQVE
Ga0268250_101843471	3300030692	Agave	MIDSASKHLGAXLQSIPKVHTSAFYKWIKNKLNAFNDAYILLLKQVE
Ga0268250_102096131	3300030692	Agave	MIDSASKHLGAXLQPIPVVRPSAFYKWIKDKLNAFNDAYILLL
Ga0268250_102182581	3300030692	Agave	MIDSTSKHLGAXLQLIPVMHPSAFYKWINDKLNTFNDAYILLL
Ga0268250_103117611	3300030692	Agave	MIDSASKHLGAXLQSIPMVHPSAFYKWIKDKLNAFNYAYILLLKQVG
Ga0268250_103119161	3300030692	Agave	MIDSACKHLGAXLQPIPVVHPSAFDKWIKNKLNAFNVAYILLLKQVE
Ga0268250_103120003	3300030692	Agave	MIDSASKHLGAGLQPIPMVHPSAFYKWIKDKLNAFNDAYILLLKQVGRVD
Ga0268250_103237941	3300030692	Agave	MIDSASKHLGAWLQPIPVVHPSAYYKWIKDKLNAFNDAYILLLKQVG
Ga0268250_103429191	3300030692	Agave	MIDSASKHLGAXLQSIPKVYTSAFYKWIKDKLNAFNDAYILFKNKWSKVDYS
Ga0268250_103437751	3300030692	Agave	MIDSASNHLEAXLQPIPVVHPSAFYKWIKDKFNAFNDAYILLLQQMG
Ga0268250_103571571	3300030692	Agave	MIDSACKHLGAXLQPIPMVHQSAFYKXIKDKLNAFNDAYILLLKQVG
Ga0268250_104472721	3300030692	Agave	MIDSVSKHLGAXLQSIPKVHTSAFYKWIKDKLNAFNDAYILLLNKXSRVDYF
Ga0268250_104502871	3300030692	Agave	MIDSASKHFGAXLQSIPMVHTSAFYKCIKDKLNAFNDVYILLLKQVG
Ga0268250_104695181	3300030692	Agave	MTDSVSKHLGAXLQSIPKVYISAFYKWIKDKLNAFNDAYILLLNKWSRVDY
Ga0268250_104811111	3300030692	Agave	MIDSASKYLGVXLYSIPKVHTSAFYKWIKDKFNAFNDAYILLLKQVE
Ga0268250_105249291	3300030692	Agave	MIDSASKHLGAXLQSIPMVYQSALYKXIKDKLNAFNDAYILSLK
Ga0268250_105382012	3300030692	Agave	IDSVSKHLGAGLQSIPKVHISAFHKWIKDKLNAFNDAYILLLNNWSRVDYS
Ga0268250_105728561	3300030692	Agave	MIDSASKHLGAXLQPIPVVHPSAFYKGIKDKLNTFNVAYILLLK
Ga0268250_106185631	3300030692	Agave	MIDSTSKHLGAXLQSIPKVHTSTFYKWIKDKLNAFNDAYILLLKQVE
Ga0268250_107211001	3300030692	Agave	MIDSASKHLGAXLQSIPMVHLSAFFKWIKDKLNAFNDAYILLLKQVG
Ga0268250_107216972	3300030692	Agave	MIDSASKHLEAXFQPIPVVHPSAFYKWIKNKLNAFNVAYILLLKQVG
Ga0268250_107492671	3300030692	Agave	MIDSASKYLKVXLQLIHVVHQSAFYKWIKDKFNAFNVAYILLSKQVG
Ga0268250_107553261	3300030692	Agave	MINSVNKHLGAXLQSIPKVHASAFYKWINDKLNVFNNAYILLLKQVE
Ga0268250_107816081	3300030692	Agave	MIDFASKHLGAXLQPIPVVHPSAFYKWIKYKLNAFNDAYILLL
Ga0268250_107889491	3300030692	Agave	MIDSASKHLGVXLQSIPKMHVSVFYKWIKDKLNAFNDAY
Ga0268250_107901631	3300030692	Agave	MIDSASKHLGAXLQSIPKVHISALYKXIKDKLNAFNDAYILLLNKWSRVDYS
Ga0268250_108086661	3300030692	Agave	LEIPQTKFKRKKLVMIDFMSKHLGAXLQPIPMMHPSAFYKXISDMLNAFSDAYILLLKQV
Ga0268250_108323601	3300030692	Agave	MIDSAIKHLRAXLQSIPKVHTSAFYKWIKDKLNVFNDAYILLLKQVE
Ga0268250_108508002	3300030692	Agave	MIDSASKHLGAXLQPILMVHPSAFYYWIKDKLNTFTDAHILLLKKVR
Ga0268250_108550711	3300030692	Agave	MIDSASKYLGAXLQLIPVVHPNAFYKLIKDKLNAFNDAYILFLK
Ga0268250_108552951	3300030692	Agave	MINYASKHLGGXLQTISVVHPSAYYKWIKDNLNAFNDAYILL
Ga0268251_101520632	3300032159	Agave	MIDSASKHLRAXLQSIRKVHTIAFYKWIKDKLNIFNDAYILLLNKWSRVDYS
Ga0268251_102108511	3300032159	Agave	MIDSASNHLGAXLQSIRRVHTGAFYKWIKDKINAFNDAYILLLKHVE
Ga0268251_103209151	3300032159	Agave	MIDSASKHLRAXLQSILIVHPSAFYKWIKDKLNTFSDNYILLKQVGLERRK
Ga0268251_103656431	3300032159	Agave	MIDSASKHLGVXLQSIPKVHTSAFYKDKLNAFNDADILLLNKWSRVDYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100067

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences