Metagenome Family F096298

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096298
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	LELDFDDTFVKPFHWSSISQAYTRVLHAQDFPRIMAMDVYCNVY
Number of Associated Samples	4
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	29.70 %
% of genes near scaffold ends (potentially truncated)	60.58 %
% of genes from short scaffolds (< 2000 bps)	96.15 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (97.115 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF14223	Retrotran_gag_2	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
All Organisms	root	All Organisms	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
cellular organisms	root	All Organisms → cellular organisms	1.92 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Asparagales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Asparagaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales → Asparagaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Asparagoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales → Asparagaceae → Asparagoideae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Asparagus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales → Asparagaceae → Asparagoideae → Asparagus	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.12 %
Asparagus officinalis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales → Asparagaceae → Asparagoideae → Asparagus → Asparagus officinalis	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005562\|Ga0058697_10023909	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → Asparagales → Asparagaceae → Asparagoideae → Asparagus → Asparagus officinalis	2165	Open in IMG/M
3300005562\|Ga0058697_10095121	Not Available	1227	Open in IMG/M
3300005562\|Ga0058697_10369155	Not Available	703	Open in IMG/M
3300005562\|Ga0058697_10423655	Not Available	664	Open in IMG/M
3300005562\|Ga0058697_10428357	Not Available	661	Open in IMG/M
3300005562\|Ga0058697_10443033	Not Available	652	Open in IMG/M
3300005562\|Ga0058697_10448042	Not Available	649	Open in IMG/M
3300005562\|Ga0058697_10470031	Not Available	636	Open in IMG/M
3300005562\|Ga0058697_10484592	Not Available	628	Open in IMG/M
3300005562\|Ga0058697_10505266	Not Available	618	Open in IMG/M
3300005562\|Ga0058697_10521819	Not Available	609	Open in IMG/M
3300005562\|Ga0058697_10532001	Not Available	605	Open in IMG/M
3300005562\|Ga0058697_10538566	Not Available	601	Open in IMG/M
3300005562\|Ga0058697_10576051	Not Available	585	Open in IMG/M
3300005562\|Ga0058697_10701257	Not Available	539	Open in IMG/M
3300005562\|Ga0058697_10707996	Not Available	536	Open in IMG/M
3300005562\|Ga0058697_10723496	Not Available	532	Open in IMG/M
3300005562\|Ga0058697_10740526	Not Available	526	Open in IMG/M
3300005562\|Ga0058697_10740815	Not Available	526	Open in IMG/M
3300005562\|Ga0058697_10743595	Not Available	526	Open in IMG/M
3300005562\|Ga0058697_10767835	Not Available	518	Open in IMG/M
3300005562\|Ga0058697_10774942	Not Available	516	Open in IMG/M
3300005562\|Ga0058697_10808529	Not Available	507	Open in IMG/M
3300005562\|Ga0058697_10835556	Not Available	500	Open in IMG/M
3300005562\|Ga0058697_10835556	Not Available	500	Open in IMG/M
3300005661\|Ga0058698_10132936	Not Available	1370	Open in IMG/M
3300005661\|Ga0058698_10208102	Not Available	1128	Open in IMG/M
3300005661\|Ga0058698_10219414	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300005661\|Ga0058698_10244347	Not Available	1049	Open in IMG/M
3300005661\|Ga0058698_10252075	Not Available	1034	Open in IMG/M
3300005661\|Ga0058698_10285340	Not Available	977	Open in IMG/M
3300005661\|Ga0058698_10287726	Not Available	973	Open in IMG/M
3300005661\|Ga0058698_10308568	Not Available	942	Open in IMG/M
3300005661\|Ga0058698_10328956	Not Available	914	Open in IMG/M
3300005661\|Ga0058698_10330620	Not Available	912	Open in IMG/M
3300005661\|Ga0058698_10334440	Not Available	907	Open in IMG/M
3300005661\|Ga0058698_10337628	Not Available	903	Open in IMG/M
3300005661\|Ga0058698_10340196	Not Available	900	Open in IMG/M
3300005661\|Ga0058698_10357582	Not Available	879	Open in IMG/M
3300005661\|Ga0058698_10364527	Not Available	871	Open in IMG/M
3300005661\|Ga0058698_10369887	Not Available	865	Open in IMG/M
3300005661\|Ga0058698_10401321	Not Available	832	Open in IMG/M
3300005661\|Ga0058698_10409198	Not Available	825	Open in IMG/M
3300005661\|Ga0058698_10419751	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	814	Open in IMG/M
3300005661\|Ga0058698_10441826	Not Available	794	Open in IMG/M
3300005661\|Ga0058698_10454681	Not Available	783	Open in IMG/M
3300005661\|Ga0058698_10464016	Not Available	776	Open in IMG/M
3300005661\|Ga0058698_10502309	Not Available	746	Open in IMG/M
3300005661\|Ga0058698_10523328	Not Available	732	Open in IMG/M
3300005661\|Ga0058698_10540022	Not Available	720	Open in IMG/M
3300005661\|Ga0058698_10555234	Not Available	711	Open in IMG/M
3300005661\|Ga0058698_10568222	Not Available	702	Open in IMG/M
3300005661\|Ga0058698_10575180	Not Available	698	Open in IMG/M
3300005661\|Ga0058698_10576433	Not Available	697	Open in IMG/M
3300005661\|Ga0058698_10576614	Not Available	697	Open in IMG/M
3300005661\|Ga0058698_10583178	Not Available	693	Open in IMG/M
3300005661\|Ga0058698_10584859	Not Available	692	Open in IMG/M
3300005661\|Ga0058698_10585074	Not Available	692	Open in IMG/M
3300005661\|Ga0058698_10627354	Not Available	669	Open in IMG/M
3300005661\|Ga0058698_10635204	Not Available	664	Open in IMG/M
3300005661\|Ga0058698_10646218	Not Available	659	Open in IMG/M
3300005661\|Ga0058698_10654567	Not Available	654	Open in IMG/M
3300005661\|Ga0058698_10681594	Not Available	641	Open in IMG/M
3300005661\|Ga0058698_10683144	Not Available	641	Open in IMG/M
3300005661\|Ga0058698_10700074	Not Available	633	Open in IMG/M
3300005661\|Ga0058698_10731619	Not Available	619	Open in IMG/M
3300005661\|Ga0058698_10765372	Not Available	604	Open in IMG/M
3300005661\|Ga0058698_10803744	Not Available	589	Open in IMG/M
3300005661\|Ga0058698_10830349	Not Available	579	Open in IMG/M
3300005661\|Ga0058698_10903184	Not Available	555	Open in IMG/M
3300005661\|Ga0058698_10907240	Not Available	553	Open in IMG/M
3300005661\|Ga0058698_10939276	Not Available	543	Open in IMG/M
3300005661\|Ga0058698_10945530	Not Available	542	Open in IMG/M
3300005661\|Ga0058698_10959258	Not Available	537	Open in IMG/M
3300005661\|Ga0058698_10962901	Not Available	536	Open in IMG/M
3300005661\|Ga0058698_10973076	Not Available	533	Open in IMG/M
3300005661\|Ga0058698_11001896	Not Available	525	Open in IMG/M
3300005661\|Ga0058698_11001900	Not Available	525	Open in IMG/M
3300005661\|Ga0058698_11002092	Not Available	525	Open in IMG/M
3300005661\|Ga0058698_11016391	Not Available	522	Open in IMG/M
3300005661\|Ga0058698_11047075	Not Available	513	Open in IMG/M
3300005661\|Ga0058698_11050555	Not Available	513	Open in IMG/M
3300005661\|Ga0058698_11067404	Not Available	508	Open in IMG/M
3300005661\|Ga0058698_11078577	Not Available	506	Open in IMG/M
3300005661\|Ga0058698_11078755	Not Available	506	Open in IMG/M
3300030692\|Ga0268250_10074247	Not Available	1389	Open in IMG/M
3300030692\|Ga0268250_10197890	Not Available	942	Open in IMG/M
3300030692\|Ga0268250_10206699	Not Available	925	Open in IMG/M
3300030692\|Ga0268250_10504498	Not Available	637	Open in IMG/M
3300030692\|Ga0268250_10517131	Not Available	630	Open in IMG/M
3300030692\|Ga0268250_10534235	Not Available	621	Open in IMG/M
3300030692\|Ga0268250_10567333	Not Available	605	Open in IMG/M
3300030692\|Ga0268250_10595494	Not Available	592	Open in IMG/M
3300030692\|Ga0268250_10771628	Not Available	527	Open in IMG/M
3300030692\|Ga0268250_10784007	Not Available	523	Open in IMG/M
3300030692\|Ga0268250_10791048	Not Available	521	Open in IMG/M
3300030692\|Ga0268250_10804904	Not Available	517	Open in IMG/M
3300030692\|Ga0268250_10831977	Not Available	509	Open in IMG/M
3300032159\|Ga0268251_10344655	Not Available	630	Open in IMG/M
3300032159\|Ga0268251_10584229	Not Available	511	Open in IMG/M
3300032159\|Ga0268251_10612480	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phylloplane	Host-Associated → Plants → Phylloplane	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	100.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005661	Agave microbial communities from Guanajuato, Mexico - As.Sf.e	Host-Associated	Open in IMG/M
3300030692	Agave microbial communities from Guanajuato, Mexico - As.Sf.e (v2)	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058697_100239092	3300005562	Agave	LELPVDDTFVKSFQWNSISQTYTRVLHAQDFLRRVAMVVFCNI*
Ga0058697_100951212	3300005562	Agave	MLELDFNDTFVKPFYWNFISQAYTRVLHAQDFLKIMAMDVYCIVY*
Ga0058697_102125561	3300005562	Agave	HKVSSSKRGRMLELAFDDTFVKTYHLELYLKAYSRVLHDQDFPKRVSIDVYCNG*
Ga0058697_103691552	3300005562	Agave	SSSKRERMLELDFDDTFVKSFQWSSISQAYTSGLHAQDFPRMMAIDVYYIVY*
Ga0058697_104236551	3300005562	Agave	MLELDFDDTFVKPFHWSSISQAYTRVLHTQDFPKIMAMDVYCTVY*
Ga0058697_104283571	3300005562	Agave	AHKVSSSKRGRMLELDFDDTFVKSFHWSSILQAYTRVLHAQDFPRIMAMDVYCNVY*
Ga0058697_104430331	3300005562	Agave	LELDFDDTFVKPFHWSSISQAYTRVLHAQDFSRIMAMDAYCNVY*
Ga0058697_104480421	3300005562	Agave	AHKVSSSKRGRMLELDFDDTFVKPYYWSSISQAYTSVLHAQDFPKRVVMDVYCNIY*
Ga0058697_104700311	3300005562	Agave	KRGRMLELDSDDTFVKPFHWSSISQAYTRVLHAQDSRTMAMDVYCIVY*
Ga0058697_104845921	3300005562	Agave	ILCRGSFHAYKVLSSKRGRMLELDSDDTFVKPFHLSSISQVYTRVLHAQDFLRIMVMDVYCNIY*
Ga0058697_105052662	3300005562	Agave	LELDFDDKFVKSFYWSPISQAYTRVLHAQDFLRIMAMDVYCNVY*
Ga0058697_105218192	3300005562	Agave	SIRAHKVSSSKRGRMLELAFDDTFVKPFQWNSISQAYTRVLHAQDFPRRVAMVVFCNI*
Ga0058697_105320012	3300005562	Agave	VNNSSLLELDFDDTFVKPFYWSSISQAYTRVLHAQDFPKRVAMDVYCNVY*
Ga0058697_105385661	3300005562	Agave	VSSSKRGRMLELAFDDTFVKTYHLELYLKAYSRVLHAQDFPKRVTMDVYCNV*
Ga0058697_105760513	3300005562	Agave	MIFVKLFHWSSISQVYTRVIHVQDFPRIMAMNVFCNVY
Ga0058697_107012571	3300005562	Agave	GRMLELDFDDTFVKSFNWSLISQACTRVQHAQDFSRIMALGVYCIIY*
Ga0058697_107079961	3300005562	Agave	CRGSFHAHKVSSSKRGRMLELDFDDTFVKPFHWSSISQAYSRVLHAQDFPRIMVIDVSCIVY*
Ga0058697_107234961	3300005562	Agave	MLELDFDNTFVKSFHWSPISQAYTRVLHAQNFPRIMAMDVYCIVY*
Ga0058697_107405261	3300005562	Agave	VKVLLELDFDDIFVKPFHWSSISQAYQEFYMLLHAQDISRTMAMDVYCNVY*
Ga0058697_107408153	3300005562	Agave	GEHITYSLQGEFIHAHKVSSSKRGRMLELDFDDTFVKSFHWSSISQAYTRGLHAQDFPRMMAIDVYYIVY*
Ga0058697_107435951	3300005562	Agave	AHKVSSSKRGRMLKLDFDDTFVKPLHWISISQAYTRVLHAQDFLCIMAMDVYCNAY*
Ga0058697_107678352	3300005562	Agave	MLELDSNDTFVKPFHWNSISQVYTRVLHAQDFPRIMAMDVYYNIY*
Ga0058697_107749421	3300005562	Agave	RAHKVSSSKRGRMLELAFDDTFVKPFQWSFILQAYSRVLHAQDFPKRVAIDVYCNS*
Ga0058697_108085291	3300005562	Agave	MATAIHKKLIVSVLELDFDDTFVKPFHWSSISQAYTRVLHAQDFPKRVAMDVYCNIY*
Ga0058697_108355561	3300005562	Agave	FVKPFHWSSISQAYTRVLHAQDFPRIMAMDVYCNVY*
Ga0058697_108355563	3300005562	Agave	MLELDFDDTFVKPFHWSSISQAYTRVLHAQDFPKIM
Ga0058698_101329362	3300005661	Agave	MLELDFDDTFVKSFQAPILQAYTRVLHAQDFPRIMAMDVYCIVY
Ga0058698_102081022	3300005661	Agave	VLELDFDDIFVKSFQWSSISQAYTRVLHAPHARDFPRIMAMDVYYNVY*
Ga0058698_102194142	3300005661	Agave	LELDFDDKFVKSFYWSPISQAYTRVLHAQDFLRIMAIDVYHIVY*
Ga0058698_102443473	3300005661	Agave	MLELDFDDIFVKPFHWSSILQACTRVLHAQDFPRIMAMDVYCNVY*
Ga0058698_102520752	3300005661	Agave	MLELDFDDTFVKPFYWNFISQAYTRVLHAQDFLKIMAMDVYCIVY*
Ga0058698_102853402	3300005661	Agave	SSSKRGRMLELDFDDTFVKPFHWSSISQAYTRVLHAQDFLRIMVMDVYCIVY*
Ga0058698_102877262	3300005661	Agave	VLELDFDDTFVKPFHWSSILQAYTRVLHAQDFPRIMVMDVYCNIY*
Ga0058698_103085681	3300005661	Agave	IFCRGSIHAHKVSSSKRGRMLELAFDDTFAKTNHWSFILQAYSRVLHDQDFPKRVAMDVYYNV*
Ga0058698_103289561	3300005661	Agave	VLELDFDDTFVKPYYWSSISQAYTRVLHIQDFPKRVAIDVYCNIY*
Ga0058698_103306201	3300005661	Agave	MELDFDYTFVKSFHWSSISQAYTRGLHAQDFPRMMATDVY
Ga0058698_103344401	3300005661	Agave	RMLELDSDDTFVKPFHWSSISQVYIRVLHAQDFPRIMVMDGYCNIY*
Ga0058698_103376282	3300005661	Agave	LELDFDDTFVKSFNWSSISQAYTRGLHAQELPKDDGAQYFLRMMATDVYYIVY*
Ga0058698_103401961	3300005661	Agave	VLEHDFDDTLGHFIGAISQAYTRVLHAQDFPRIMAMDVFCIVY*
Ga0058698_103575821	3300005661	Agave	VSSSKRGRMLELDFDDTFVKPLHWSSISQAYTRVLHAQDFPRIMAVDVYCNVY*
Ga0058698_103645272	3300005661	Agave	DFDDTFVKLLHWSSISQVYTRVQHAQDFPKRIAMDVYCNIY*
Ga0058698_103698871	3300005661	Agave	MLELDFDDTFVKPYYWSSISQAYTSVLHAQDFPKRVVMDVYCNIY*
Ga0058698_104013211	3300005661	Agave	LELDFDDTFVKPFHWSSISQAYTRVLHASHAQDFPRIMAMDMYCNVY*
Ga0058698_104091982	3300005661	Agave	MLELDFDDIFMKPFHWSSISQAYTRVLHAQDFPRIMVMDVYCNVY*
Ga0058698_104197511	3300005661	Agave	LELDFDDTFVKPFHLSSISQAYTRGLHAQDFPIIMAMDVYCNIY*
Ga0058698_104418261	3300005661	Agave	AHKVSSSKRERMLELDFDDTFVKPFHWSSISQAYIRVLHVKDFPRIMAMDVYCIVY*
Ga0058698_104546812	3300005661	Agave	LLELDFDDTFVKPCHWSSISQAYIRVLHAQDFSGIMVMDVYCNVY*
Ga0058698_104640162	3300005661	Agave	MQQELLELAFNDTFVKLYYWSSISQAYTRVLHAQDFPKRVAMDVYCNIY*
Ga0058698_105023091	3300005661	Agave	MLELDFDDTFVKPFHWSSILQAYIRVLHAQDFPRIMAMDVYCNVY*
Ga0058698_105233283	3300005661	Agave	MKTPPAENMLMLELDSDDTFVKPFHWISISQVYTRVLHAQDFPRIMAMDVYC
Ga0058698_105400222	3300005661	Agave	VLELDFDDTFVKLYYWSSISQAYTRVLHAQDFPKRVAMDVYYNIY*
Ga0058698_105552341	3300005661	Agave	DTFVKISLEPISQAYTRVLHAQDFPRIMAMDVYYIVY*
Ga0058698_105682221	3300005661	Agave	DFDDTFVKLLHWSSISQAYTRVQHAQDFPKRIAMDVYCNVY*
Ga0058698_105751803	3300005661	Agave	VKPIGLLELDFDDTFVKSFHWSSISQAYTRGLHAQDFPRMMAIDVYYIVY*
Ga0058698_105764332	3300005661	Agave	HKVSSSKRGRMLELDSDDTFVKPFYWSSISQPYTRVLHVQDFPRILAMDVYYIVY*
Ga0058698_105766141	3300005661	Agave	VLELDFDNTFVKPFYWSSISQAHTRVLHAQDFPRIMAMDVHCIVY*
Ga0058698_105831781	3300005661	Agave	MLELAFDDTFVKLFHWSSILQAYTRVLHAQDFPKRVAMNVYCNIY*
Ga0058698_105848591	3300005661	Agave	HKVSSSKRGRMLELDSDDTFVKPFHWSSISQAYTRVLHAQDFPRTMAMDVYCYVY*
Ga0058698_105850741	3300005661	Agave	MLELDSDDTFVKPFHWSSISQVCTRVLHAQDFLRIMAMNVYCNIY*
Ga0058698_106273542	3300005661	Agave	LLELDFDDTFVKPFHWSSISQTYTRVLHTQDFPRIMAMDVYCNIY
Ga0058698_106352041	3300005661	Agave	DTFVKPFHWSSISQAYTRVLHAQDFPRIMAMDVYYNVY*
Ga0058698_106462181	3300005661	Agave	AHKVSSSKRGRILELDSDDTFVKPFHWSSISQAYIRVLHAQDFPRITAMDVYCIVY*
Ga0058698_106545671	3300005661	Agave	LELDFDDIFVKPFHWSSISQPYTRVLHAQDFPKRAAMDVYCNVY*
Ga0058698_106815942	3300005661	Agave	MLELDFDDTLVKPYYWSYISQAYTRVLHAQDFPKRMVMDVYCNVY*
Ga0058698_106831441	3300005661	Agave	FVKPFHWSSISQAYTRVLHAQDFSRIMAMDVYCIVY*
Ga0058698_107000741	3300005661	Agave	LELDFDDTFVKPYYWSSISQAYIRVLYVQDFPKRVVMDVYYNIY*
Ga0058698_107316192	3300005661	Agave	LELDFDDTFVKPFHWRSISQAYTSILHAQDFPRIIAMDVYCIVY*
Ga0058698_107653721	3300005661	Agave	MLELDSDDTFVKPFHWSSISQVYTRVLHAQDFSRIMAMDVYCNIY*
Ga0058698_108037441	3300005661	Agave	LELDSDDTFVKPFHWSSISQVYTRVLHAQDFSRIMAMDVYCNIY*
Ga0058698_108303491	3300005661	Agave	DDTFVKPFHWSSISQAYIRVLHAQDFPRIIAMDVYCNIY*
Ga0058698_109031841	3300005661	Agave	LLELDFDDTFVKPFHWSSISQAYIRVLHAQDFPRIMTMDVYCIVY*
Ga0058698_109072401	3300005661	Agave	LELDFDDTFVKLFHWSFISQAYTKVLHAQDLTKIMAMDVYCIVY*
Ga0058698_109392761	3300005661	Agave	LELDYGDTFVKPFHWRSISQAYTRVLHAQDFPKRMAMDVYCNVY*
Ga0058698_109455301	3300005661	Agave	MLELNFDDTFVKLFHWSSISQAYTRVLYAQDFPRNMAIDVYCNVY*
Ga0058698_109592582	3300005661	Agave	HKVSSSKRGRMLELDFDDTFVKSFHWSSISQAYTRGLYAQDFPRMMAIDVYYIVY*
Ga0058698_109629011	3300005661	Agave	LELDFDDTFVKPFHWSSISQAYTRVLHAQDFPRIMAMDVYCNVY*
Ga0058698_109730762	3300005661	Agave	MKLLMELDFDDSFVKPFHWSSISQAYTRVLHAQDFPKIMAMDVYCIIY*
Ga0058698_110018962	3300005661	Agave	KVSSSKRERMLELDFDDTFVKPFHWSFISQAYSRVLHAQDFPKIMAMDVYYVVY*
Ga0058698_110019001	3300005661	Agave	ILCRGSFHAHKVSSSKGGRMLELDFDDTFVKPFHWSFISQAYTRVLHAQDFPRIMVMDVYCNVY*
Ga0058698_110020921	3300005661	Agave	MLELDFDDTFVKPYYWSSISQAYTRVLHVQDFPKRVAMDVYCNIY*
Ga0058698_110093872	3300005661	Agave	MLELAFDDTFVKPFHWSSISQAYSRVLHVQDFPKRVAIDVYCNG*
Ga0058698_110163911	3300005661	Agave	VLELNFNDTFVKPFYWSSISQAYTRVLHAQDFPRIMAMDVYCNVY*
Ga0058698_110470752	3300005661	Agave	MQTGSRCCSVVLELDFDDTFVKPFHWSSISQAYTRVLHAQDFPRIMAMYVYCNVY*
Ga0058698_110505552	3300005661	Agave	EFSCTQSVIIKRGRMLELDSDDIFVKPFRWSSISQVYTRVLHAQHFLRIMVKDVYCNIY*
Ga0058698_110674042	3300005661	Agave	LELTFDDTFVKPFYWSSISQAYSRVLHAQDFPKRVAMDVYCNIY*
Ga0058698_110785771	3300005661	Agave	MVEVLEHDFDDTFVKPFHWSSISQAYTRVLYAQDFPKRMAMDVYCNVY*
Ga0058698_110787551	3300005661	Agave	LELDFDDIFVKPFHWSFISQAYTSVLHAQDFPRIMTMDVYCNIY*
Ga0058698_110966341	3300005661	Agave	MLELDFDDTFVKPFHWSSISQAYTRVLHAQDFPRIMAM
Ga0268250_100742472	3300030692	Agave	MLELDSDDTFVKPFHWSSISQVYTRVLHAQDFPRIMAMDVYCNVS
Ga0268250_101978901	3300030692	Agave	MSSLLELDFDDTFVKPFHWSSISQAYTRVLLAQDFLKRMAVDVYCN
Ga0268250_102066991	3300030692	Agave	KRGRMLELDFDDTFVKPYYWSSISQAYTSVLHAQDFPKRVVMDVYCNIY
Ga0268250_105044981	3300030692	Agave	VLEHDFDDIFVKPFHWSSISQAYTRVLHAQYFPKRMAMDVYCNVY
Ga0268250_105171311	3300030692	Agave	PKLLEFDFDDTFVKLFHWSSILQAYTRVLHAQDFPRIMTMDVYCNVY
Ga0268250_105342351	3300030692	Agave	DFDDTFVKPFHWSSISQAYTRVLHTQDFPRIMAMDVYCIVY
Ga0268250_105673331	3300030692	Agave	ELDFDDSFVKPFHWSSISQAYTRVLHAQDFSRIMAMDVYCIVY
Ga0268250_105954941	3300030692	Agave	MQQELLELAFNDTFVKLYYWSSISQAYTRVLHAQDFPKRVAMD
Ga0268250_107716281	3300030692	Agave	MDILLELDFDDTFVKPYYWNSISQAYTRVLHAQDFPKRVTMACIV
Ga0268250_107840071	3300030692	Agave	DTFVKPYYWSSISQAYTRVLHAQDFPKRVAMDVYYNIN
Ga0268250_107910481	3300030692	Agave	KVSSPKRGRMLELDFDDTFVKPFHWSPISQAYTRVLHAQDFPRIMAMDVYCIVY
Ga0268250_108049041	3300030692	Agave	AHKVSSSKRGRILELDFDDTFVKPFHWRSISQAYTSILHAQDFPRIIAMDVYCIVY
Ga0268250_108319772	3300030692	Agave	LFFTAAVISFSRIKVLELDFDDTFVKLYYWSSISQAYTRVLHAQDFPKRVAMDVY
Ga0268251_103446551	3300032159	Agave	CRGSIRAHKVSSSKRGRMLELDFDDTFVKPYYWSSISQAYTSVLHAQDFPKRVVMDVYCNIY
Ga0268251_105842291	3300032159	Agave	AGGVFFRAHKVSSSKRGRMLELDFDDTFVRPFHWSSISQAYTRVLHAQDFPRIMGMDVYCNVY
Ga0268251_106124801	3300032159	Agave	IFVKSFHWSSISQPYIRVLHAQDFPKRAAMDVYCNVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096298

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences