Metagenome / Metatranscriptome Family F094222

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094222
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	53 residues
Representative Sequence	MKIFTGLFFLISIAGSAWAAVAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Number of Associated Samples	57
Number of Associated Scaffolds	71

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.19 %
% of genes near scaffold ends (potentially truncated)	24.53 %
% of genes from short scaffolds (< 2000 bps)	87.74 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.698 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.981 % of family members)
Environment Ontology (ENVO)	Unclassified (22.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.50% β-sheet: 0.00% Coil/Unstructured: 47.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 71 Family Scaffolds
PF04116	FA_hydroxylase	11.27
PF09721	Exosortase_EpsH	2.82
PF03330	DPBB_1	1.41
PF01381	HTH_3	1.41
PF00196	GerE	1.41
PF01050	MannoseP_isomer	1.41
PF13683	rve_3	1.41

COG ID	Name	Functional Category	% Frequency in 71 Family Scaffolds
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	11.27

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
All Organisms	root	All Organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
cellular organisms	root	All Organisms → cellular organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	13.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.60 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	13.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	13.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.72 %
Acidihalobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Rhodobacteraceae bacterium HLUCCO18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	13.21 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.94 %
Bradyrhizobium nitroreducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium nitroreducens	0.94 %
Acidihalobacter yilgarnensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Rhodobacteraceae bacterium HLUCCO18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	13.21 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.94 %
Bradyrhizobium nitroreducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium nitroreducens	0.94 %
Acidihalobacter yilgarnensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01DFE14	Not Available	510	Open in IMG/M
3300004643\|Ga0062591_102583105	Not Available	535	Open in IMG/M
3300005332\|Ga0066388_107127838	Not Available	562	Open in IMG/M
3300005434\|Ga0070709_11512521	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300005435\|Ga0070714_100662561	Not Available	1005	Open in IMG/M
3300005435\|Ga0070714_100662561	Not Available	1005	Open in IMG/M
3300005435\|Ga0070714_100662561	Not Available	1005	Open in IMG/M
3300005435\|Ga0070714_101789181	Not Available	600	Open in IMG/M
3300005435\|Ga0070714_101789181	Not Available	600	Open in IMG/M
3300005436\|Ga0070713_100597969	Not Available	1048	Open in IMG/M
3300005436\|Ga0070713_100597969	Not Available	1048	Open in IMG/M
3300005436\|Ga0070713_100747136	Not Available	936	Open in IMG/M
3300005436\|Ga0070713_100747136	Not Available	936	Open in IMG/M
3300005439\|Ga0070711_100636514	Not Available	893	Open in IMG/M
3300005536\|Ga0070697_100615454	Not Available	955	Open in IMG/M
3300005536\|Ga0070697_100615454	Not Available	955	Open in IMG/M
3300005559\|Ga0066700_10924282	Not Available	578	Open in IMG/M
3300005559\|Ga0066700_10924282	Not Available	578	Open in IMG/M
3300005575\|Ga0066702_10166503	Not Available	1315	Open in IMG/M
3300005575\|Ga0066702_10166503	Not Available	1315	Open in IMG/M
3300005575\|Ga0066702_10166503	Not Available	1315	Open in IMG/M
3300005764\|Ga0066903_100633799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1863	Open in IMG/M
3300005764\|Ga0066903_101597398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	1236	Open in IMG/M
3300005764\|Ga0066903_101767684	Not Available	1180	Open in IMG/M
3300005764\|Ga0066903_101767684	Not Available	1180	Open in IMG/M
3300005764\|Ga0066903_103067929	Not Available	904	Open in IMG/M
3300006028\|Ga0070717_11852479	Not Available	545	Open in IMG/M
3300006175\|Ga0070712_100126105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1934	Open in IMG/M
3300006175\|Ga0070712_100354397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	1202	Open in IMG/M
3300006175\|Ga0070712_101828361	Not Available	532	Open in IMG/M
3300006175\|Ga0070712_101828361	Not Available	532	Open in IMG/M
3300006358\|Ga0068871_101502751	Not Available	636	Open in IMG/M
3300006796\|Ga0066665_11223210	Not Available	574	Open in IMG/M
3300006800\|Ga0066660_11452739	Not Available	538	Open in IMG/M
3300007788\|Ga0099795_10614087	Not Available	518	Open in IMG/M
3300007788\|Ga0099795_10614087	Not Available	518	Open in IMG/M
3300009137\|Ga0066709_101547856	Not Available	953	Open in IMG/M
3300009137\|Ga0066709_101547856	Not Available	953	Open in IMG/M
3300009137\|Ga0066709_102612106	Not Available	676	Open in IMG/M
3300009137\|Ga0066709_102612106	Not Available	676	Open in IMG/M
3300009137\|Ga0066709_104150893	Not Available	527	Open in IMG/M
3300009137\|Ga0066709_104150893	Not Available	527	Open in IMG/M
3300009143\|Ga0099792_10115099	Not Available	1435	Open in IMG/M
3300009143\|Ga0099792_10115099	Not Available	1435	Open in IMG/M
3300010159\|Ga0099796_10112293	Not Available	1038	Open in IMG/M
3300010361\|Ga0126378_11662912	Not Available	725	Open in IMG/M
3300010376\|Ga0126381_104037410	Not Available	571	Open in IMG/M
3300012198\|Ga0137364_10801955	Not Available	711	Open in IMG/M
3300012203\|Ga0137399_10235752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	1497	Open in IMG/M
3300012203\|Ga0137399_10235752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	1497	Open in IMG/M
3300012362\|Ga0137361_10250936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1612	Open in IMG/M
3300012582\|Ga0137358_10137339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1663	Open in IMG/M
3300012685\|Ga0137397_11174059	Not Available	554	Open in IMG/M
3300012917\|Ga0137395_10292638	Not Available	1152	Open in IMG/M
3300012923\|Ga0137359_10065447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3173	Open in IMG/M
3300012927\|Ga0137416_11392607	Not Available	635	Open in IMG/M
3300014501\|Ga0182024_10780433	All Organisms → cellular organisms → Bacteria → Proteobacteria	1167	Open in IMG/M
3300015371\|Ga0132258_10281372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4082	Open in IMG/M
3300016357\|Ga0182032_11334687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300016371\|Ga0182034_10239683	Not Available	1425	Open in IMG/M
3300016387\|Ga0182040_10399644	Not Available	1078	Open in IMG/M
3300016387\|Ga0182040_11634762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	549	Open in IMG/M
3300016422\|Ga0182039_10712406	Not Available	885	Open in IMG/M
3300016445\|Ga0182038_10540491	Not Available	999	Open in IMG/M
3300017972\|Ga0187781_10312373	Not Available	1116	Open in IMG/M
3300018468\|Ga0066662_10217394	Not Available	1528	Open in IMG/M
3300018468\|Ga0066662_10217394	Not Available	1528	Open in IMG/M
3300018482\|Ga0066669_10150857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1710	Open in IMG/M
3300018482\|Ga0066669_10150857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1710	Open in IMG/M
3300021478\|Ga0210402_10061733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3295	Open in IMG/M
3300021478\|Ga0210402_10061733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3295	Open in IMG/M
3300021478\|Ga0210402_10061733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3295	Open in IMG/M
3300021478\|Ga0210402_10061733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3295	Open in IMG/M
3300021560\|Ga0126371_10179081	Not Available	2203	Open in IMG/M
3300021560\|Ga0126371_13631958	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300024347\|Ga0179591_1091998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3487	Open in IMG/M
3300024347\|Ga0179591_1091998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3487	Open in IMG/M
3300024347\|Ga0179591_1091998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3487	Open in IMG/M
3300024347\|Ga0179591_1091998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	3487	Open in IMG/M
3300025915\|Ga0207693_10632090	Not Available	832	Open in IMG/M
3300025928\|Ga0207700_12039426	Not Available	501	Open in IMG/M
3300025928\|Ga0207700_12039426	Not Available	501	Open in IMG/M
3300026551\|Ga0209648_10163775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1741	Open in IMG/M
3300026551\|Ga0209648_10248941	Not Available	1317	Open in IMG/M
3300026551\|Ga0209648_10248941	Not Available	1317	Open in IMG/M
3300027680\|Ga0207826_1021069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	1795	Open in IMG/M
3300031057\|Ga0170834_112711423	Not Available	863	Open in IMG/M
3300031057\|Ga0170834_112711423	Not Available	863	Open in IMG/M
3300031057\|Ga0170834_112711423	Not Available	863	Open in IMG/M
3300031231\|Ga0170824_108021482	Not Available	1365	Open in IMG/M
3300031231\|Ga0170824_108021482	Not Available	1365	Open in IMG/M
3300031231\|Ga0170824_118415476	Not Available	1275	Open in IMG/M
3300031421\|Ga0308194_10310712	Not Available	549	Open in IMG/M
3300031421\|Ga0308194_10310712	Not Available	549	Open in IMG/M
3300031421\|Ga0308194_10310712	Not Available	549	Open in IMG/M
3300031446\|Ga0170820_13150876	Not Available	535	Open in IMG/M
3300031446\|Ga0170820_13150876	Not Available	535	Open in IMG/M
3300031446\|Ga0170820_13150876	Not Available	535	Open in IMG/M
3300031446\|Ga0170820_17293627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HLUCCO18	1083	Open in IMG/M
3300031474\|Ga0170818_109455749	Not Available	593	Open in IMG/M
3300031474\|Ga0170818_109455749	Not Available	593	Open in IMG/M
3300031708\|Ga0310686_118509700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13308	Open in IMG/M
3300031890\|Ga0306925_11480714	Not Available	666	Open in IMG/M
3300031941\|Ga0310912_10469950	Not Available	981	Open in IMG/M
3300031962\|Ga0307479_10040150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium nitroreducens	4493	Open in IMG/M
3300032261\|Ga0306920_101929436	Not Available	829	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	1.89%
Engineered	Engineered	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.17%
Plants	Host-Associated → Plants	1.89%
Solid Waste	Engineered → Solid Waste	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Roots	Host-Associated → Plants → Roots	0.94%
Grass	Engineered → Solid Waste → Grass	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.87%
Loam	Environmental → Terrestrial → Soil → Loam	26.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Composting	Engineered → Solid Waste → Grass → Composting	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_04734630	2170459016	Switchgrass, Maize And Mischanthus Litter	LISLGGSAWAGTSPAPGPEMSAGIVGMTLAAGVVYLIKRRKRS
Ga0062591_1025831052	3300004643	Soil	MSNVAAADHKFMWKEMGMKVLGSLFFVITFVGSAWAGTAPAPGPEMSAGVIGMTLAAGVVYLIRRRKRS*
Ga0066388_1071278381	3300005332	Tropical Forest Soil	LLGAKAIWELGMKIFTSVFFLVSLAGSAWAQTAPAPGPEMTSGLIGMTLAAGAIYLIKRRKRS*
Ga0070709_115125212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LFGMRERNMKIFTSLAFLVSLAGSAWAFPPGGDGFGAPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0070714_1006625611	3300005435	Agricultural Soil	MRALSSLILLVSFAGSALAGPTAVAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0070714_1006625612	3300005435	Agricultural Soil	MRMTIPSSVILLVSLAGSALAGFTAVAPGPEMSAGVIGMTLAVGVVYLIKSRKRT*
Ga0070714_1006625613	3300005435	Agricultural Soil	MKVFTSIFFLISLIESATAGGTTRIAPGPEMSAGIIGMTLAAGVVYLIKRRKRS*
Ga0070714_1017891811	3300005435	Agricultural Soil	MGMKIFTSLFFLICLGGWAWTGNLAAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0070714_1017891812	3300005435	Agricultural Soil	MMKILGSLFFLISLVGSAWAGTAPGGGVVLGVAPGPEMSAGIVGMTLAAGVVYLIKRRQRS*
Ga0070713_1005979691	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMKILGSLFFLISLVGSAWAGTAPGGGVVLGVAPGPEMSAGIVGMTLAAGVVY
Ga0070713_1005979692	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFTGLFFLLSLSGSAWAAALAAPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0070713_1007471362	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKILGSLFFLICLVGSAWAGGALPGPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0070713_1007471363	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKIFTGLFFLISLAGSAWAITPQAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0070711_1006365144	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GMMKILGSLFFLISLVGSASAGLLPAAPGPEMSAGIIGMTLAAGVVYLIKRRRRS*
Ga0070697_1006154541	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MWKEMGMKVISSLFFLISIAGSAWAGTAAAPGPEMSAGVIGMTLAAGV
Ga0070697_1006154542	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGLGIKILTGVFLISIAGSAWAGAPAAPGPEMSAGVIGMTLAAGVLYLIRRRKRS*
Ga0066700_109242821	3300005559	Soil	LISIAGSAWAGAPAAPGPEMSAGVIGITLAAGVLYLIRRRKRS*
Ga0066700_109242822	3300005559	Soil	MMKILGSLFFLISIAGSAWAGTVTAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0066702_101665032	3300005575	Soil	MKILGSLFFLINLAGSAWAGPSIVTADGPEMAAGVLGMSLAAGVVYLIKRRKRN*
Ga0066702_101665033	3300005575	Soil	MWKEMGMKVISSLFLLISFVGSASAGVSVGPVGADGPEMAAGVVGMTLAASVVYLIKRRKRN*
Ga0066702_101665034	3300005575	Soil	MGMKAVSSLFLLISLVGSASAGALPVGADGPEMAAGVVGMTLATGVVYLIRRRKRS*
Ga0066903_1006337993	3300005764	Tropical Forest Soil	MKIFSGLVFLIGLTGSAWAVIAPGPGPEISGGVVGMTLAAGMVYLIRRRKRS*
Ga0066903_1015973982	3300005764	Tropical Forest Soil	ILTSLVFLISLAGPAAAVVVGVPVPGPEMTAGVMGMTLAAGVVYLIKRRGKRS*
Ga0066903_1017676842	3300005764	Tropical Forest Soil	MKIFTSLAFLISLAGPAAAVVLGAAVPGPEMSAGVVGMTLAAGVVYLIKRRGKRS*
Ga0066903_1017676843	3300005764	Tropical Forest Soil	MKIFTSLAFLITLAGPAAAVVIGTPVPGPEISAGIVGMTLAAGVVYLIKRRNKRS*
Ga0066903_1030679292	3300005764	Tropical Forest Soil	MKILTSLVFLISLAGPAAAVVVGVPVPGPEMSAGVMGMTLAAGVVYLIKRRGKRS*
Ga0070717_118524791	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KILGSLFFLICLVGSAWAGGALPGPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0070712_1001261054	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKIFTSLFFLISLAGSAWAQPAPGPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0070712_1003543972	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFTGLFFLLSLSGSAWAAALAAPGPEMSAGIVGMTLAAGVVYLIK
Ga0070712_1018283611	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMKMLGSLFFFISLVGSASAGVLPAAPGPEMSAGIVGMTLAAGVVYLIKRRRRS*
Ga0070712_1018283612	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKIFTSLFFLICLGGSAWAGPLAAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0068871_1015027511	3300006358	Miscanthus Rhizosphere	MWKEMGMKVLSSLFFLISLVELAWAGTPNTADGPEMAAGVLGMTLAAGVVYLIRRRKRS*
Ga0066665_112232102	3300006796	Soil	MKLFTGLFLLISIAGSAWAAAAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0066660_114527391	3300006800	Soil	AGSAWAGTPVQAPGPEMSAGVIGMTLAAGVVYLLKRRKRS*
Ga0099795_106140872	3300007788	Vadose Zone Soil	MKIFSSLFFLVFLGGSAWATPVGAPGPEMSAGVIGMTLAAGVVYLIRRRKRS*
Ga0099795_106140873	3300007788	Vadose Zone Soil	WKEMGMKVLSSLFFFISLVGSAWAGTVGADGPEMAAGVLGMTLAAGLVYLIRRRKRS*
Ga0066709_1015478561	3300009137	Grasslands Soil	MKIFTGLFFLISIAGSAWAGVAQAPGPEMSAGVIGMTLAAGVVYLIKRRKSS*
Ga0066709_1015478562	3300009137	Grasslands Soil	MMKILGSLFFLISITGSAWAGAATAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0066709_1026121062	3300009137	Grasslands Soil	MKVISSLFLLISFVGSASAGALPVGADGPEMAAGVVGMTLATGVVYLIRRRKRS*
Ga0066709_1026121063	3300009137	Grasslands Soil	LVSLAGSASAGTVPAAADGPEMAAGVIGVMLATGVVYLVRRRKRS*
Ga0066709_1041508931	3300009137	Grasslands Soil	MKIITSVFFLVSLAGSAWAGPLAAPGPEMSAGIVGMTLAAGVVYLIKRCKRS*
Ga0066709_1041508932	3300009137	Grasslands Soil	MKIFTGLFFLICLAGSAWAQGAPVPGPEMSAGIVGMTLAAGVVYLIKRRKRS*
Ga0099792_101150992	3300009143	Vadose Zone Soil	MMKILGSLFFLISFAGSAWAAVAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0099792_101150993	3300009143	Vadose Zone Soil	MWKEMGMKVLSSLFFFISLVGSAWAGTVGADGPEMAAGVLGMTLAAGVVYLIKRRKRS*
Ga0099796_101122931	3300010159	Vadose Zone Soil	VFFLISLVGSAWAGTVAAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0126378_116629122	3300010361	Tropical Forest Soil	VEWDMKIFTSLAFLITLAGPAAAVVIGTPVPGPEISAGIVGMTLAAGVVYLIKRRNKRS*
Ga0126381_1040374101	3300010376	Tropical Forest Soil	MKIFTSLAFLITLAGPAAAVVIGTPVPGPEMSAGIVGMTLAAGVVYLIKRRNKRS*
Ga0137364_108019552	3300012198	Vadose Zone Soil	MKIFTGLFFLISIAGSAWAGVAQVPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0137399_102357521	3300012203	Vadose Zone Soil	MMKILGSLFFLISITGSAWAGAATAPGPEMSAGVIGMTLAAGV
Ga0137399_102357522	3300012203	Vadose Zone Soil	MKIFTGLFFLISIAGSAWAAVAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0137361_102509365	3300012362	Vadose Zone Soil	LISFAGSAWAAGAPAAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0137358_101373392	3300012582	Vadose Zone Soil	MKIFSSLFFLVFLGGSAWATPVGAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0137397_111740592	3300012685	Vadose Zone Soil	MKIFTGLFFLISIAGSAWAAVAQAPGPEMSAGVIGMTLAAGVV
Ga0137395_102926383	3300012917	Vadose Zone Soil	MMKILGSVFFLISFAGSAWAGGAPAPGPEMSAGVIGMTLAAGVVYVIKRRKRS*
Ga0137359_100654474	3300012923	Vadose Zone Soil	MKIFTGLFFLISIAGSAWAAGAQAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0137416_113926072	3300012927	Vadose Zone Soil	MKIFTGLFFLISIAGSAWAGAATAPGPEMSAGVIGMTLAAGVVYLIKRRKRS*
Ga0182024_107804332	3300014501	Permafrost	MKKLLGSLIFVVSIAGSAWAGGPAPAPAPEMATGVIGMTLAAGVVYLLSRRRRG*
Ga0132258_102813724	3300015371	Arabidopsis Rhizosphere	MKIIASILFLVSLAGSAWAGFTAGAPGPEMSAGVIGMTLAAGALYFIKRRKRG*
Ga0182032_113346871	3300016357	Soil	EHRIQLGRHMKTLTSLVFLISLAGPAAAVVVGVPVPGPEMSAGGVGMTLAAGVVYLIKRRNKRS
Ga0182034_102396832	3300016371	Soil	MKIFSGLVFLIGLTGSAWANVVGPGPELSSGVIGMTLAAGVVYLINRRKRG
Ga0182040_103996441	3300016387	Soil	LIGLTGSAWASVVGPGPELSSGVIGMTLAAGVVYLINRRKRG
Ga0182040_116347622	3300016387	Soil	MRIVTGLLFLISLAGSAWASPSLAPAPEMSAGIVGMTLAAGVVYLIKRRKRS
Ga0182039_107124063	3300016422	Soil	MKIFTSIVLLICLEGTAWAGQLPAPGPEMSAGVIGMTLAAGVLYLIKRRNRA
Ga0182038_105404911	3300016445	Soil	LAGPAAADLVGLPDLVGIPVPLATVPGPEMTAGIMGMTLAASVVYLIKRRGKRS
Ga0187781_103123732	3300017972	Tropical Peatland	MKLFSGIIFLLSLAGSAWAGGVPRAPGPEMSAGVIGMTLVAGVVYLLKRRTRS
Ga0066662_102173942	3300018468	Grasslands Soil	MGMKAVSSLFLLISLVGSASAGALPVGADGPEMAAGVVGMTLATGVAYLIRRRKRS
Ga0066662_102173943	3300018468	Grasslands Soil	MWKEMGITVISSRFLLISFVGSASAGVSVGPVGADGPEMAAGVVGMTLAASVVYLIKRRKRN
Ga0066669_101508571	3300018482	Grasslands Soil	MKIFTGLFFLISIAGSAWAGVAQAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0066669_101508572	3300018482	Grasslands Soil	MKILGSLFFLISITGSAWAGAATAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0210402_100617332	3300021478	Soil	MKILGSLFFLISLVGSAWAGTPIPAAPGPEMSAGLVGMTLAAGVVYIIKRRKRG
Ga0210402_100617333	3300021478	Soil	MKILSSLFFLISLVGSASAAATVPVAPGPEMSAGVIGMTLVAGVVYLIKRRQRS
Ga0210402_100617334	3300021478	Soil	MKILSSLFFLISLVGSAWAGVGPPPAPGPEMSAGVIGMTLAASVVYLIKRRKRS
Ga0210402_100617335	3300021478	Soil	MKVIIGLFFLISITGSAWAVVAPAPGPEMSAGVIGMTLVAGVVYLIKRRRRS
Ga0126371_101790811	3300021560	Tropical Forest Soil	MKIFTSLAFLITLAGPAAAVVIGTPVPGPEISAGIVGMTLAAGVVYLIKRRNKRS
Ga0126371_136319581	3300021560	Tropical Forest Soil	MRIFTSLFFLISLGGSAWAAAVPGPEMSAGVVGMTLAAGVVYLIKRRERS
Ga0179591_10919983	3300024347	Vadose Zone Soil	MELGIKILNGLFILISLAGSAWAAGAQAPGPEMSAGVFGMTLAAGVVYLIKRRKRS
Ga0179591_10919984	3300024347	Vadose Zone Soil	MKIFGQLFFLISLAGSAWAVAAPAPGPEMSAGVIGMTLAAGAVYLIKRRKRS
Ga0179591_10919985	3300024347	Vadose Zone Soil	MMKIFGSFFFLISFAGSAWAGTPAAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0179591_10919986	3300024347	Vadose Zone Soil	MKIFSSLFFLVFLGGSAWATPVGAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0207693_106320901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKIFTSLVFLISLAGSAWAFVTPPGAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0207700_120394261	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKILSSLILLVSFAGSALAAATAVAPGPEMSAGVIGMTLAAGVVYLIRR
Ga0207700_120394262	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRALSSLILLVSFAGSALAGPTAVAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0209648_101637754	3300026551	Grasslands Soil	MMKILGSVFFLISITGSAWAVAAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0209648_102489411	3300026551	Grasslands Soil	MKIFTGLFFLISIAGSAWAAVAQAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0209648_102489412	3300026551	Grasslands Soil	MKVFSSLFFLISLIGSAWAGTAGGLGPATVGADGPEMAAGVLGMTLAAGLVYLIRRRKRS
Ga0207826_10210692	3300027680	Tropical Forest Soil	MKILTSLFFLITLVGSAWAGTSSAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0170834_1127114232	3300031057	Forest Soil	MKIFTGLFFLISLAGSAWAVTPQAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0170834_1127114233	3300031057	Forest Soil	MMKILGSLFFLISLVGSASAGVLPAAPGPEMSAGVIGMTLAAGVVYLIKRRRRS
Ga0170834_1127114234	3300031057	Forest Soil	MKIFTSLFFLICLGGSAWAGPLAAPGPEMSAGIVGMTLAAGVVYLIKRRKRG
Ga0170824_1080214822	3300031231	Forest Soil	MKILGSLFFLICLVGSAWAGGALPGPGPEMSAGIIGMTLAAGVVYLIKRRKRS
Ga0170824_1080214826	3300031231	Forest Soil	MELGIKILTGVFLISIAGSAWAAAAPAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0170824_1184154762	3300031231	Forest Soil	MKLFTGLFFLVSLGGSAWAAASVAPGPEMSAGVIGMTLAAGAVYLIKRRKRS
Ga0308194_103107121	3300031421	Soil	MRTFTSLFFLICLGGSAWALQVAAPGPEMSAGVVGMTLAAGVVYLIKRR
Ga0308194_103107122	3300031421	Soil	MKILSSLFFLISFAGSASAGTNTAPGPEMSAGVIGMTLAAGVVYLIKRRKRS
Ga0308194_103107123	3300031421	Soil	KIFTSFFFLVSISGSAWAAVSVAPGPEMSAGVVGMTLAAGVVYLIKRRQRS
Ga0170820_131508761	3300031446	Forest Soil	KILGSLFFLISLVGSAWAGGTVGADGPEISAGVIGMTLAAGVVYLIRRRKGS
Ga0170820_131508762	3300031446	Forest Soil	MKIFGSLFFLISLVGSAWAGVVTAPGPEMSAGVIGMMLAAGVAYLIKRRKRS
Ga0170820_131508763	3300031446	Forest Soil	MCAFADKVKHIEEIGMMKIFGSLFFLISLVGSAWAGVVTAPGPEMSAGVIGMMLAAG
Ga0170820_172936272	3300031446	Forest Soil	MKLFTGLFFLLSLSGSAWAAALAAPGPEMSAGIVGMTLAAGVVY
Ga0170818_1094557492	3300031474	Forest Soil	MMKIFGSLFFLISLVGSAWAGVVTAPGPEMSAGVIGMMLAAGVAYLIKRRERS
Ga0170818_1094557493	3300031474	Forest Soil	KVLSGLFLLISLVGSAAAGTPAQAPGPEMSAGVIGMTLAAGVVYLIKQRKRS
Ga0310686_11850970012	3300031708	Soil	MKIFTSIVFLLSLAGSAWAGAPVGAPGPEMSAGLVGMTVAAGVVYLIKRRNRS
Ga0306925_114807142	3300031890	Soil	MKIFSGLVFLIGLTGSAWASVVGPGPELSSGVIGMTLAAGVVYLINRRKRG
Ga0310912_104699502	3300031941	Soil	MKIFSGLVFLIGLTGSAWASVGPGPELSSGVIGMTLAAGVVYLINRRKRG
Ga0307479_100401504	3300031962	Hardwood Forest Soil	MRIITSSLFLVSLAGSAWATGPAPPGAPGPEISAGILGMTLAAGVVYLIKRRKRS
Ga0306920_1019294362	3300032261	Soil	MKIFSGLVFLIGLTGSAWASVGPGPELSSGVIGMTLAAGVVYLINRRKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094222

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences