Metagenome / Metatranscriptome Family F093044

Basic Information
Family ID	F093044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	48 residues
Representative Sequence	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQ
Number of Associated Samples	78
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.04 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	89.62 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Unclassified (74.528 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (64.151 % of family members)
Environment Ontology (ENVO)	Unclassified (70.755 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (66.038 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.21% β-sheet: 0.00% Coil/Unstructured: 40.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00486	Trans_reg_C	93.40
PF02424	ApbE	2.83
PF01512	Complex1_51K	1.89
PF01794	Ferric_reduct	0.94
PF14417	MEDS	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	2.83
COG1894	NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)	Energy production and conversion [C]	1.89
COG4656	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit	Energy production and conversion [C]	1.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
All Organisms	root	All Organisms	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
cellular organisms	root	All Organisms → cellular organisms	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10052128	Not Available	1061	Open in IMG/M
3300005332\|Ga0066388_107835266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005363\|Ga0008090_15798406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005445\|Ga0070708_102069704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300005468\|Ga0070707_101323373	Not Available	687	Open in IMG/M
3300010048\|Ga0126373_13112239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300010358\|Ga0126370_12248785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300010359\|Ga0126376_12103361	Not Available	608	Open in IMG/M
3300010366\|Ga0126379_13548600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300010376\|Ga0126381_100097220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3749	Open in IMG/M
3300010376\|Ga0126381_104503149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300010398\|Ga0126383_10837197	Not Available	1004	Open in IMG/M
3300012356\|Ga0137371_10635491	Not Available	819	Open in IMG/M
3300012971\|Ga0126369_10045574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3713	Open in IMG/M
3300012971\|Ga0126369_12160705	Not Available	644	Open in IMG/M
3300012971\|Ga0126369_12471354	Not Available	605	Open in IMG/M
3300015373\|Ga0132257_101800495	Not Available	787	Open in IMG/M
3300016319\|Ga0182033_10224336	Not Available	1511	Open in IMG/M
3300016404\|Ga0182037_10780015	Not Available	823	Open in IMG/M
3300016445\|Ga0182038_10405980	Not Available	1143	Open in IMG/M
3300017955\|Ga0187817_10521361	Not Available	758	Open in IMG/M
3300018007\|Ga0187805_10602654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300021377\|Ga0213874_10090446	Not Available	1005	Open in IMG/M
3300021478\|Ga0210402_10834446	Not Available	847	Open in IMG/M
3300021560\|Ga0126371_12049474	Not Available	689	Open in IMG/M
3300021860\|Ga0213851_1142443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300027874\|Ga0209465_10256433	Not Available	875	Open in IMG/M
3300027889\|Ga0209380_10192069	Not Available	1199	Open in IMG/M
3300027905\|Ga0209415_10315157	Not Available	1335	Open in IMG/M
3300031231\|Ga0170824_118697852	Not Available	507	Open in IMG/M
3300031549\|Ga0318571_10044502	Not Available	1299	Open in IMG/M
3300031564\|Ga0318573_10197848	Not Available	1065	Open in IMG/M
3300031572\|Ga0318515_10537814	Not Available	623	Open in IMG/M
3300031668\|Ga0318542_10487322	Not Available	640	Open in IMG/M
3300031679\|Ga0318561_10237998	Not Available	991	Open in IMG/M
3300031679\|Ga0318561_10822186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300031682\|Ga0318560_10094047	Not Available	1543	Open in IMG/M
3300031682\|Ga0318560_10613597	Not Available	589	Open in IMG/M
3300031719\|Ga0306917_10969722	Not Available	664	Open in IMG/M
3300031723\|Ga0318493_10024318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2700	Open in IMG/M
3300031723\|Ga0318493_10716327	Not Available	561	Open in IMG/M
3300031724\|Ga0318500_10066169	Not Available	1576	Open in IMG/M
3300031724\|Ga0318500_10073068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1511	Open in IMG/M
3300031736\|Ga0318501_10206138	Not Available	1030	Open in IMG/M
3300031736\|Ga0318501_10388435	Not Available	753	Open in IMG/M
3300031748\|Ga0318492_10140921	Not Available	1211	Open in IMG/M
3300031748\|Ga0318492_10206989	Not Available	1005	Open in IMG/M
3300031751\|Ga0318494_10086687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1709	Open in IMG/M
3300031751\|Ga0318494_10175146	Not Available	1215	Open in IMG/M
3300031751\|Ga0318494_10284581	Not Available	952	Open in IMG/M
3300031751\|Ga0318494_10514023	Not Available	698	Open in IMG/M
3300031751\|Ga0318494_10644005	Not Available	620	Open in IMG/M
3300031768\|Ga0318509_10313437	Not Available	878	Open in IMG/M
3300031771\|Ga0318546_10139198	Not Available	1628	Open in IMG/M
3300031780\|Ga0318508_1117550	Not Available	745	Open in IMG/M
3300031781\|Ga0318547_10726901	Not Available	617	Open in IMG/M
3300031781\|Ga0318547_11034188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300031782\|Ga0318552_10141696	Not Available	1205	Open in IMG/M
3300031792\|Ga0318529_10372235	Not Available	665	Open in IMG/M
3300031792\|Ga0318529_10435302	Not Available	610	Open in IMG/M
3300031795\|Ga0318557_10498864	Not Available	559	Open in IMG/M
3300031797\|Ga0318550_10259908	Not Available	842	Open in IMG/M
3300031805\|Ga0318497_10664052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300031821\|Ga0318567_10224279	Not Available	1052	Open in IMG/M
3300031821\|Ga0318567_10327884	Not Available	864	Open in IMG/M
3300031823\|Ga0307478_11222102	Not Available	626	Open in IMG/M
3300031832\|Ga0318499_10069309	Not Available	1339	Open in IMG/M
3300031845\|Ga0318511_10141014	Not Available	1049	Open in IMG/M
3300031845\|Ga0318511_10503664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300031860\|Ga0318495_10389105	Not Available	615	Open in IMG/M
3300031894\|Ga0318522_10035169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1715	Open in IMG/M
3300031894\|Ga0318522_10035482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1709	Open in IMG/M
3300031894\|Ga0318522_10160147	Not Available	849	Open in IMG/M
3300031894\|Ga0318522_10310047	Not Available	598	Open in IMG/M
3300031896\|Ga0318551_10298489	Not Available	906	Open in IMG/M
3300031897\|Ga0318520_10045858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2275	Open in IMG/M
3300031897\|Ga0318520_10083100	Not Available	1764	Open in IMG/M
3300031942\|Ga0310916_10457940	Not Available	1086	Open in IMG/M
3300031946\|Ga0310910_10462738	Not Available	1007	Open in IMG/M
3300031954\|Ga0306926_11132750	Not Available	923	Open in IMG/M
3300031954\|Ga0306926_11851416	Not Available	683	Open in IMG/M
3300031959\|Ga0318530_10388183	Not Available	579	Open in IMG/M
3300032008\|Ga0318562_10225975	Not Available	1085	Open in IMG/M
3300032009\|Ga0318563_10013030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3946	Open in IMG/M
3300032009\|Ga0318563_10424466	Not Available	719	Open in IMG/M
3300032025\|Ga0318507_10040485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1790	Open in IMG/M
3300032035\|Ga0310911_10625517	Not Available	624	Open in IMG/M
3300032041\|Ga0318549_10388469	Not Available	629	Open in IMG/M
3300032043\|Ga0318556_10644945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300032054\|Ga0318570_10134253	Not Available	1100	Open in IMG/M
3300032054\|Ga0318570_10348197	Not Available	675	Open in IMG/M
3300032059\|Ga0318533_10741493	Not Available	721	Open in IMG/M
3300032060\|Ga0318505_10139879	Not Available	1117	Open in IMG/M
3300032060\|Ga0318505_10362411	Not Available	685	Open in IMG/M
3300032063\|Ga0318504_10526615	Not Available	567	Open in IMG/M
3300032067\|Ga0318524_10682745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300032068\|Ga0318553_10375520	Not Available	744	Open in IMG/M
3300032261\|Ga0306920_102672457	Not Available	683	Open in IMG/M
3300032805\|Ga0335078_10067083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5257	Open in IMG/M
3300033289\|Ga0310914_10133643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2172	Open in IMG/M
3300033289\|Ga0310914_10552182	Not Available	1040	Open in IMG/M
3300033290\|Ga0318519_10571077	Not Available	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Aquatic	Environmental → Aquatic	2.83%
Plants	Host-Associated → Plants	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.28%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.62%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	64.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100521283	3300000597	Forest Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSAL
Ga0066388_1078352661	3300005332	Tropical Forest Soil	VPIRLRVALVFALALAIAFALGGWLLISQLSAANLRTTDSALA
Ga0008090_157984061	3300005363	Tropical Rainforest Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAAR
Ga0070708_1020697042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALSARLSQASRYAEDD
Ga0070707_1013233732	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LSIRLRVALVFALALAIAFTLAGWLFLSQLSAAMLRSTDAAL
Ga0126373_131122392	3300010048	Tropical Forest Soil	VSIRLRVALVFTLALAAAFTLGGWLFVSQLSAAMLRSTDA
Ga0126370_122487851	3300010358	Tropical Forest Soil	VRVSIRLRVALVFALALAMAFALGGWLFVNQLSAAMLRSTDA
Ga0126376_121033611	3300010359	Tropical Forest Soil	VPIRLRVALVFALALAIAFLLGGWLFISQLSAAMLRSTDSAL
Ga0126372_117096621	3300010360	Tropical Forest Soil	MALVFALALAIAFALGGWLFISQLSAAMLRSTDSALAARLSQVSHDPEGETTPVATLPPGGP
Ga0126379_118483422	3300010366	Tropical Forest Soil	MALVFALALAIAFALGGWLFLSQLSAAMLRSTDSALAARLSQVRSDPEGETTPVAT
Ga0126379_135486002	3300010366	Tropical Forest Soil	VPIRLRVALVFALALAMAFALGGWLFVNQLSAAMLRSTDAALATRL
Ga0126381_1000972201	3300010376	Tropical Forest Soil	VSIRLRVAVVFTLALAAAFALGGWLFVSQLSAAMLRSTDATLAARLSQASRYTA
Ga0126381_1045031492	3300010376	Tropical Forest Soil	MSIRLRVAVVFTLALAAAFTLGGWLFVSQLSAAMLRSTDAALAARLSQASR
Ga0126383_108371971	3300010398	Tropical Forest Soil	VPIRLRVALVFALALAIAFVLGGWLFISHLSAAMLRSTDSALAARLSQVGHD
Ga0137371_106354911	3300012356	Vadose Zone Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQAGRYAEDDGNP
Ga0126369_100455741	3300012971	Tropical Forest Soil	MALVFALALAIAFALGGWLFLSQLSAAMLRSTDSALAARLSQVSHDPEGETTPVTA
Ga0126369_121607051	3300012971	Tropical Forest Soil	MSIRLRVALVFALALAIAFTLGGWLFLSQLSAAMLR
Ga0126369_124713542	3300012971	Tropical Forest Soil	VSIRLRVALVFALALAVAFALGGWLFVSQLSATMMRSTDAALSARLNQVGRY
Ga0132257_1018004951	3300015373	Arabidopsis Rhizosphere	MPIRLRVALVFALALAAAFALGGWLFISQLSVAMLKST
Ga0182033_102243364	3300016319	Soil	VSIRLRVALVFALALAVAFALGSWLFVNQLSAAMLRSTDATLAARLNQA
Ga0182037_107800152	3300016404	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAANLRTTDSALAARLSQV
Ga0182038_104059803	3300016445	Soil	VSIRLRVALVFALALAVALALGGWLFVSQLSDAMLRSTDAALAARL
Ga0187817_105213611	3300017955	Freshwater Sediment	VSIKLRVAVVFTLALAIAFVLGSWLFITQLSAQLRSATD
Ga0187805_106026541	3300018007	Freshwater Sediment	MSIRLRVALVFTVALGVAFALGSWLLVSRLHGQLIQGTDNALA
Ga0213874_100904461	3300021377	Plant Roots	VPIRLRVALVFALALSVAFALGGWLFVSRLSAAMLNSTDAALAARLSQVGRYTE
Ga0210402_108344462	3300021478	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLNSTDATLAARLAQATRY
Ga0126371_120494742	3300021560	Tropical Forest Soil	MPIRLRVALVFALALAAAFALGGWLFVSQLGAAMLKSTDAALAARLAQASR
Ga0213851_11424432	3300021860	Watersheds	VPIRLRVALVFALALTVAFALGGWLFVSQLSAAMLKSTDAALAV
Ga0209465_102564332	3300027874	Tropical Forest Soil	MPIRLRVALVFALALAAAFALGGWLFVSQLGAAMLKSTDAALA
Ga0209380_101920691	3300027889	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQAGRYTE
Ga0209415_103151571	3300027905	Peatlands Soil	MSIRLRVALVFTLALAVAVALGSWLFISLLAAQLRSSTDAALRTQL
Ga0170824_1186978521	3300031231	Forest Soil	VPIRLRVALVFALALTVAFALGGWLFVSQLSAAMLKSTDAALAIRLSQAGRYSEDD
Ga0318571_100445021	3300031549	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLR
Ga0318573_101978482	3300031564	Soil	VSIRLRVALVFALALAIAYALASWLLIGQLSAAMLRSTDATLAARLTQSARSSDS
Ga0318515_105378141	3300031572	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARLAQASRYT
Ga0318542_104873222	3300031668	Soil	VPIRLRMALVFALALAIAFALGGWLFLSQLSAATLRSTDSALAARLNQ
Ga0318561_102379981	3300031679	Soil	VSIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAAIGVVSP
Ga0318561_108221861	3300031679	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRST
Ga0318560_100940471	3300031682	Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGETTPIAAV
Ga0318560_106135972	3300031682	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLKTTDAT
Ga0306917_109697222	3300031719	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQVGRYTEDDENP
Ga0318493_100243181	3300031723	Soil	VPIRLRMALVFALALAIAFALGGWLFLSQLSAATLRSTDSALAARLLQAGRDPESETAP
Ga0318493_107163271	3300031723	Soil	VSIRLRVALVFALALAVAFALGGWLFISQLSAAMLRTTDASL
Ga0318500_100661691	3300031724	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQVGRYTED
Ga0318500_100730684	3300031724	Soil	MSIRLRVALVFALALAVAFTLGGWLFLSQLSAAMLRTT
Ga0318501_102061381	3300031736	Soil	VPIRLRMALVFALALAIAFALAGWLFLSQLSAATLRSTDSD
Ga0318501_103884351	3300031736	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLRT
Ga0318492_101409213	3300031748	Soil	MSIRLRVAVVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARLAQASRYTADD
Ga0318492_102069892	3300031748	Soil	VSIRLRVALVFALALAVAFALGGWLFISQLSAAMLRTTDASLAARLSQ
Ga0318494_100866874	3300031751	Soil	VPIRLRMALVFALALAIAFALGGWLLITQLSAANLRTT
Ga0318494_101751463	3300031751	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSTANLRTTDSALAVRLSQV
Ga0318494_102845813	3300031751	Soil	VSIRLRVALVFALALAVAFALGSWLFVSQLSAAMLKS
Ga0318494_105140232	3300031751	Soil	VSIRLRVALVFALALAIVLALGGWLFVSRLSAAMLRTTDANLAVRVT
Ga0318494_106440051	3300031751	Soil	VSIRLRVALVFALALAIVLALGGWLFIRQLSGAMLRT
Ga0318509_103134371	3300031768	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRS
Ga0318546_101391984	3300031771	Soil	MSIRLRVAVVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARLAQASRYT
Ga0318508_11175501	3300031780	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLSQVGRYTEDDQSPRSPA
Ga0318547_107269011	3300031781	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSTANLRTTD
Ga0318547_110341882	3300031781	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLRTTDAALTAR
Ga0318552_101416963	3300031782	Soil	VSIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEG
Ga0318529_103722351	3300031792	Soil	VSIRLRVALVFALALAIVLALGSWLFISQLSAAMLRATDAALHVRLNQGVRSS
Ga0318529_104353022	3300031792	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALAARLSQ
Ga0318557_104988641	3300031795	Soil	MSIRLRVALVFALALAVAFTLGGWLFLSQLSAAMLRTTDAN
Ga0318550_102599081	3300031797	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAAMLRSTDSALAARLSQVSRDPEGETAPVAA
Ga0318497_106640522	3300031805	Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGETT
Ga0318567_102242791	3300031821	Soil	VSIRLRVALVFALALAIAYALASWLLIGQLSAAMLRST
Ga0318567_103278842	3300031821	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLRTTDAALTARLT
Ga0307478_112221021	3300031823	Hardwood Forest Soil	MPIRLRVALVFALALAIAFTLGGWLFISQLSAAMLRTTDAALAARLTQASRYTADDEEG
Ga0318499_100693093	3300031832	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAAMLRSTDSALAARLSQVSRDPE
Ga0318511_101410141	3300031845	Soil	MSIRLRVAVVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARLAQ
Ga0318511_105036642	3300031845	Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVG
Ga0318495_103891052	3300031860	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLKSTDTALAARLSQVGRY
Ga0318522_100351693	3300031894	Soil	VPIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGETTR
Ga0318522_100354824	3300031894	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAANLRT
Ga0318522_101601472	3300031894	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAANL
Ga0318522_103100471	3300031894	Soil	VSIRLRVALVFALALAVAFALGSWLFISQLSAARLRATDAALAARV
Ga0318551_102984891	3300031896	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLKSTDTALAA
Ga0318520_100458584	3300031897	Soil	VPIRLRMALVFALALAIAFALGGWLFLSQLSAATLRSTDSALAAR
Ga0318520_100831004	3300031897	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLSQVGRYTEDDQ
Ga0310916_104579401	3300031942	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSTANLR
Ga0310910_104627382	3300031946	Soil	VPIRLRMALVFALALAIAFALGGWLFISKLSAANLRTTDSALA
Ga0306926_111327502	3300031954	Soil	MSIRLRVAVVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARLAQASRYTADDEE
Ga0306926_118514161	3300031954	Soil	MSIRLRVALVFALALAIAFALGSWLFLSRLSAAMLGTTDAN
Ga0318530_103881831	3300031959	Soil	VSIRLRVALVFALALAIVLALGGWLFIRQLSGAMLRTTDA
Ga0306922_114257661	3300032001	Soil	VPIRLRMALVFALALAIAFALGGWLLITQLSAANLRTTDSALAARLSQVRSD
Ga0318562_102259753	3300032008	Soil	VPIRLRMALVFALALAIAFALGGWLFLSQLSAATLR
Ga0318563_100130301	3300032009	Soil	VPIRLRVALVFALALAIAFALGGWLFISQLSAAMLRSTDSA
Ga0318563_104244662	3300032009	Soil	MSIRLRVALVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAARL
Ga0318507_100404854	3300032025	Soil	VSIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGSGEQACRL
Ga0310911_106255171	3300032035	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDA
Ga0318549_103884691	3300032041	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLKSTDTALAARLSQVGRYTED
Ga0318556_104733392	3300032043	Soil	VPIRLRMALVFALALAIAFALGGWLFLSQLSAAMLRSTDSALAARLSQVSHDPEGETTPVTA
Ga0318556_106449451	3300032043	Soil	VSIRLRVALVFALALAIAFTLGSWLFLSRLSAAMLGTTDANLAARLTQAT
Ga0318570_101342532	3300032054	Soil	VSIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGETTPIAAVT
Ga0318570_103481972	3300032054	Soil	MSIRLRVAVVFALALAIAFTLGGWLFLSRLSAAMLKTTDATLAA
Ga0318533_107414931	3300032059	Soil	VSIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLSQVG
Ga0318505_101398793	3300032060	Soil	VSIRLRVALVFALALAIAFVLGGWLFINQLSAAMLRSTDSALAARLSQVGHDPEGETT
Ga0318505_103624112	3300032060	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLSQVGRY
Ga0318504_105266152	3300032063	Soil	MSIRLRVALVFALALAVAFTLGGWLFLSQLSAAMLRTTDANLTARLSQGRAAED
Ga0318524_106827451	3300032067	Soil	VSIRLRVALVFALALAIAYALASWLLIGQLSAAMLRSTDATLAARLT
Ga0318553_103755202	3300032068	Soil	VSIRLRVALVFALALAIAYALASWLLIGQLSAAMLRSTDATLAARLTQSARSSD
Ga0306920_1026724572	3300032261	Soil	VSIRLRVALVFALALAIAFALGSWLFISQLSAAMLR
Ga0335078_100670831	3300032805	Soil	VPIRLRVALVFVAALAVAFALGGWLFYSRLSASLLNATDAALAARLSQAGRYLP
Ga0310914_101336431	3300033289	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLS
Ga0310914_105521822	3300033289	Soil	VSIRLRVALVFALALAIAFVLGGWLFISQLSAAMLRSTDSALAARLSQVGHDPEGETTPI
Ga0318519_105710772	3300033290	Soil	VPIRLRVALVFALALAVAFALGGWLFVSQLSAAMLRSTDAALASRLSQVGRYTEDDQSP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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