NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090243

Metagenome Family F090243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090243
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 55 residues
Representative Sequence MSAPDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA
Number of Associated Samples 76
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 90.74 %
% of genes near scaffold ends (potentially truncated) 14.81 %
% of genes from short scaffolds (< 2000 bps) 73.15 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (49.074 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(32.407 % of family members)
Environment Ontology (ENVO) Unclassified
(79.630 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.593 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 82.14%    β-sheet: 0.00%    Coil/Unstructured: 17.86%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF13155Toprim_2 6.48
PF08291Peptidase_M15_3 1.85
PF10544T5orf172 1.85
PF11753DUF3310 0.93
PF03237Terminase_6N 0.93
PF06056Terminase_5 0.93
PF02178AT_hook 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.04 %
UnclassifiedrootN/A37.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10023307All Organisms → Viruses → Predicted Viral2886Open in IMG/M
3300000117|DelMOWin2010_c10039104All Organisms → Viruses → Predicted Viral2212Open in IMG/M
3300000117|DelMOWin2010_c10056258All Organisms → Viruses → Predicted Viral1688Open in IMG/M
3300000117|DelMOWin2010_c10095456All Organisms → Viruses → Predicted Viral1107Open in IMG/M
3300000117|DelMOWin2010_c10162022Not Available725Open in IMG/M
3300000117|DelMOWin2010_c10205049Not Available604Open in IMG/M
3300000117|DelMOWin2010_c10205613Not Available603Open in IMG/M
3300004829|Ga0068515_104021All Organisms → Viruses → Predicted Viral1889Open in IMG/M
3300004829|Ga0068515_116832All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Microsporidia → Microsporidia incertae sedis → Amphiacanthidae → Amphiamblys → unclassified Amphiamblys → Amphiamblys sp. WSBS2006915Open in IMG/M
3300005057|Ga0068511_1071033All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300005512|Ga0074648_1025248All Organisms → Viruses → Predicted Viral3161Open in IMG/M
3300005512|Ga0074648_1093979All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300005837|Ga0078893_10676746All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300005837|Ga0078893_11292338All Organisms → Viruses → Predicted Viral1558Open in IMG/M
3300005837|Ga0078893_11509542All Organisms → Viruses → Predicted Viral2524Open in IMG/M
3300006027|Ga0075462_10106256Not Available871Open in IMG/M
3300006752|Ga0098048_1012261All Organisms → Viruses → Predicted Viral2995Open in IMG/M
3300006752|Ga0098048_1044555All Organisms → Viruses → Predicted Viral1407Open in IMG/M
3300006752|Ga0098048_1063386All Organisms → Viruses → Predicted Viral1147Open in IMG/M
3300006752|Ga0098048_1064407All Organisms → Viruses → Predicted Viral1136Open in IMG/M
3300006752|Ga0098048_1250233Not Available518Open in IMG/M
3300006789|Ga0098054_1036655All Organisms → Viruses → Predicted Viral1907Open in IMG/M
3300006793|Ga0098055_1095537All Organisms → Viruses → Predicted Viral1164Open in IMG/M
3300006793|Ga0098055_1119801All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300006802|Ga0070749_10243466All Organisms → Viruses → Predicted Viral1020Open in IMG/M
3300006802|Ga0070749_10635883Not Available574Open in IMG/M
3300006803|Ga0075467_10161072All Organisms → Viruses → Predicted Viral1279Open in IMG/M
3300006803|Ga0075467_10274688All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Salinovirus → Salinovirus utanense905Open in IMG/M
3300006810|Ga0070754_10085418All Organisms → Viruses → Predicted Viral1583Open in IMG/M
3300006810|Ga0070754_10179431Not Available997Open in IMG/M
3300006810|Ga0070754_10480854Not Available536Open in IMG/M
3300006868|Ga0075481_10182858Not Available755Open in IMG/M
3300006916|Ga0070750_10144230All Organisms → Viruses → Predicted Viral1080Open in IMG/M
3300006916|Ga0070750_10457761All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228527Open in IMG/M
3300006920|Ga0070748_1013241All Organisms → Viruses → Predicted Viral3542Open in IMG/M
3300006920|Ga0070748_1201498Not Available727Open in IMG/M
3300006922|Ga0098045_1042435All Organisms → Viruses → Predicted Viral1142Open in IMG/M
3300006922|Ga0098045_1101837Not Available677Open in IMG/M
3300006990|Ga0098046_1028243All Organisms → Viruses → Predicted Viral1382Open in IMG/M
3300007229|Ga0075468_10199483Not Available585Open in IMG/M
3300007236|Ga0075463_10142198All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage775Open in IMG/M
3300007344|Ga0070745_1124440All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228991Open in IMG/M
3300007345|Ga0070752_1144742All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage981Open in IMG/M
3300007345|Ga0070752_1302358Not Available609Open in IMG/M
3300007346|Ga0070753_1143295Not Available909Open in IMG/M
3300007539|Ga0099849_1232068Not Available684Open in IMG/M
3300007540|Ga0099847_1017715All Organisms → Viruses → Predicted Viral2332Open in IMG/M
3300011258|Ga0151677_1081903All Organisms → Viruses → Predicted Viral1167Open in IMG/M
3300013010|Ga0129327_10055706All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281968Open in IMG/M
3300017697|Ga0180120_10035391Not Available2290Open in IMG/M
3300017709|Ga0181387_1019316All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300017710|Ga0181403_1020841All Organisms → Viruses → Predicted Viral1392Open in IMG/M
3300017713|Ga0181391_1128038Not Available567Open in IMG/M
3300017714|Ga0181412_1154897All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228514Open in IMG/M
3300017719|Ga0181390_1086291Not Available859Open in IMG/M
3300017724|Ga0181388_1125670Not Available611Open in IMG/M
3300017728|Ga0181419_1150651Not Available557Open in IMG/M
3300017733|Ga0181426_1005163All Organisms → Viruses → Predicted Viral2550Open in IMG/M
3300017738|Ga0181428_1008851All Organisms → Viruses → Predicted Viral2298Open in IMG/M
3300017738|Ga0181428_1067513Not Available834Open in IMG/M
3300017741|Ga0181421_1019506All Organisms → Viruses → Predicted Viral1853Open in IMG/M
3300017741|Ga0181421_1056683All Organisms → Viruses → Predicted Viral1038Open in IMG/M
3300017745|Ga0181427_1002093Not Available5001Open in IMG/M
3300017759|Ga0181414_1036145All Organisms → Viruses → Predicted Viral1333Open in IMG/M
3300017762|Ga0181422_1168547All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage668Open in IMG/M
3300017763|Ga0181410_1028423All Organisms → Viruses → Predicted Viral1803Open in IMG/M
3300017776|Ga0181394_1187102Not Available634Open in IMG/M
3300017781|Ga0181423_1355504Not Available533Open in IMG/M
3300017782|Ga0181380_1011019All Organisms → Viruses → Predicted Viral3480Open in IMG/M
3300017782|Ga0181380_1063836All Organisms → Viruses → Predicted Viral1303Open in IMG/M
3300017783|Ga0181379_1137234All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage878Open in IMG/M
3300017963|Ga0180437_10056008All Organisms → Viruses → Predicted Viral3618Open in IMG/M
3300017967|Ga0181590_10106482All Organisms → Viruses → Predicted Viral2185Open in IMG/M
3300017971|Ga0180438_10019333Not Available7539Open in IMG/M
3300017971|Ga0180438_10538001Not Available870Open in IMG/M
3300018080|Ga0180433_10435547All Organisms → Viruses → Predicted Viral1007Open in IMG/M
3300018416|Ga0181553_10018963Not Available5158Open in IMG/M
3300018420|Ga0181563_10011146Not Available7525Open in IMG/M
3300018421|Ga0181592_10308514All Organisms → Viruses → Predicted Viral1142Open in IMG/M
3300020194|Ga0181597_10060235All Organisms → Viruses → Predicted Viral2308Open in IMG/M
3300021356|Ga0213858_10015112All Organisms → Viruses → Predicted Viral3655Open in IMG/M
3300021356|Ga0213858_10017241All Organisms → Viruses → Predicted Viral3429Open in IMG/M
3300021371|Ga0213863_10379992Not Available575Open in IMG/M
3300021373|Ga0213865_10012726All Organisms → Viruses → Predicted Viral4815Open in IMG/M
3300021373|Ga0213865_10398480Not Available612Open in IMG/M
3300021957|Ga0222717_10003440Not Available11897Open in IMG/M
3300022065|Ga0212024_1104733Not Available504Open in IMG/M
3300022072|Ga0196889_1083422Not Available594Open in IMG/M
3300022178|Ga0196887_1022892All Organisms → Viruses → Predicted Viral1829Open in IMG/M
3300022178|Ga0196887_1108342All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage612Open in IMG/M
3300022183|Ga0196891_1034237All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.948Open in IMG/M
3300022187|Ga0196899_1045884All Organisms → Viruses → Predicted Viral1455Open in IMG/M
3300024292|Ga0228630_1035218All Organisms → Viruses → Predicted Viral1240Open in IMG/M
3300025070|Ga0208667_1002271Not Available6368Open in IMG/M
3300025070|Ga0208667_1003473All Organisms → Viruses → Predicted Viral4766Open in IMG/M
3300025070|Ga0208667_1010397All Organisms → Viruses → Predicted Viral2142Open in IMG/M
3300025084|Ga0208298_1027191All Organisms → Viruses → Predicted Viral1220Open in IMG/M
3300025098|Ga0208434_1013914All Organisms → Viruses → Predicted Viral2135Open in IMG/M
3300025305|Ga0208684_1148219All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228551Open in IMG/M
3300025543|Ga0208303_1014903All Organisms → Viruses → Predicted Viral2313Open in IMG/M
3300025543|Ga0208303_1061059Not Available884Open in IMG/M
3300025652|Ga0208134_1155716Not Available571Open in IMG/M
3300025674|Ga0208162_1145266Not Available655Open in IMG/M
3300025769|Ga0208767_1262474Not Available531Open in IMG/M
3300025853|Ga0208645_1026776All Organisms → Viruses → Predicted Viral3058Open in IMG/M
3300025889|Ga0208644_1301317Not Available636Open in IMG/M
3300031851|Ga0315320_10665211Not Available674Open in IMG/M
3300034375|Ga0348336_005658Not Available8594Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous32.41%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater19.44%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine14.81%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.48%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.56%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh4.63%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment3.70%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water2.78%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.85%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water1.85%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.85%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.93%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.93%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300024292Seawater microbial communities from Monterey Bay, California, United States - 37DEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1002330773300000115MarineMSAPDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA*
DelMOWin2010_1003910433300000117MarineMSAPNGVCLHQIVGELENIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNA*
DelMOWin2010_1005625833300000117MarineMSAPDGVCLHQIVGELERIKKSMVMDSREARDELEWQILRNHIDELDELIENINNS*
DelMOWin2010_1009545633300000117MarineMSAPDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNS*
DelMOWin2010_1016202233300000117MarineMSAPDGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDELDELIENINNA*
DelMOWin2010_1020504923300000117MarineMSAPDGVCLHQILGELEKIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNS*
DelMOWin2010_1020561323300000117MarineMSAPDGVCLHQIVGELEKIKKSMVXDSREARDEQEWQILRNHIDEINELTEEITKQWIYSSN*
Ga0068515_10402173300004829Marine WaterMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDEQDWQILRNHIDEIEELIENIDNA*
Ga0068515_11683213300004829Marine WaterMSAPNGICLHQIVGELEKIKKSMVMDLVVMRDEQDWQILRNHIDEIEELIENINNA*
Ga0068511_107103313300005057Marine WaterGVCLHQIVGELEKIKKSMVMDLVVMRDEQDWQILRNHIDEIEELIENIDNA*
Ga0074648_102524843300005512Saline Water And SedimentMSAPDGICLHQIVGELEKIKKSMVMDFVVMRDEQEWQILRNHVDEIDELIENINNA*
Ga0074648_109397923300005512Saline Water And SedimentMSAPDGICLHQIVGELEKIKKSMVMDFVVMRDEQDWQILRNHVDEIDELIENINNA*
Ga0078893_1067674613300005837Marine Surface WaterMSAVEGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEIEELIENINNA*
Ga0078893_1129233813300005837Marine Surface WaterMSAPDGVCLHQIVGELEKIKKSMVTDSTEARDEFEWQLLQNHIDKVEELIENINSL*
Ga0078893_1150954273300005837Marine Surface WaterMSATDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIKEVEELIENINNA*
Ga0075462_1010625633300006027AqueousMSAPDGICLHQIVGELEKIKKSLVTDSTEARDELEWQILQNHIDEVEELIENINNA*
Ga0098048_101226173300006752MarineMSAVEGVCLHQIVGELEKIKKSMVTDSTEARDELEWQILQNHIDEIEELIENINNA*
Ga0098048_104455543300006752MarineMSAPDGICLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINN
Ga0098048_106338613300006752MarineMSAPEGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA*
Ga0098048_106440753300006752MarineMSAVEGVCLHQIVGELEKIKKSMVTDSREARDEFEWQLLQNHIDKIEELIENIN
Ga0098048_125023323300006752MarineMSAPDGVCLHQIVGELEKIKKSMVTDSREARDEFEWQLLQNHIDKIEELIENIN
Ga0098054_103665533300006789MarineMSAVEGVCLHQIVRELEKIKKSMVMDFPVMRDADDWQILRHHVDEIEELIENINNA*
Ga0098055_109553723300006793MarineMSAVEGVCLHQIVGELEKIKKSMVTDSREARDELEWQILQNHIDEIEELIENINNA*
Ga0098055_111980113300006793MarineMSAPDGICLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA*
Ga0070749_1024346633300006802AqueousMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEVEELIENINNA*
Ga0070749_1063588323300006802AqueousMSAPNGVCLHQIVGELENIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA*
Ga0075467_1016107253300006803AqueousMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA*
Ga0075467_1027468833300006803AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHIDEVDELIENINNA*
Ga0070754_1008541863300006810AqueousMSAPDGVCLHQIVGELEKIQKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA*
Ga0070754_1017943113300006810AqueousMSATDGICLHQIVGELEKIKESMVMDLPVMRDEQDWQILRHHVDEVEELIENINNA*
Ga0070754_1048085423300006810AqueousMSATDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEVEELIENINNA*
Ga0075481_1018285833300006868AqueousMSAPDGICLHQIVGELEKIKESMVMGLPVMRDEQDWQILRHHVDEVEELIENINNA*
Ga0070750_1014423033300006916AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLVVMRDEQDWQILRNHIDELDELIENINNA*
Ga0070750_1045776123300006916AqueousMREVEGESLYQIVGELERIKKSMVMDSREARDEQEWQILRNHIDEINELTEEITKQWIYSSN*
Ga0070748_101324133300006920AqueousMSAVDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIKEVEELIENINNA*
Ga0070748_120149813300006920AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEIEELIENINNA*
Ga0098045_104243553300006922MarineMSAVEGVCLHQIVGELEKIKKSMVTDSREARDEFEWQLLQNHIDKIEELIENINNA*
Ga0098045_110183733300006922MarineMSAVEGICLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA*
Ga0098046_102824313300006990MarineMSAVEGVCLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA*
Ga0075468_1019948313300007229AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA*
Ga0075463_1014219843300007236AqueousVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNA*
Ga0070745_112444043300007344AqueousMSATDGICLHQIVGELEKIKESMVMDLPVMRDEQDWQILRNHVDDVEELIENINNA*
Ga0070752_114474213300007345AqueousMSAPDGICLHQIVGELEKIKESMVMDLPVMRDEQDWQILRHHVDEVEELIENINNA*
Ga0070752_130235813300007345AqueousMSAPDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEVEELIENINNA*
Ga0070753_114329513300007346AqueousMSATDGICLRQIVGELEKIKESMVMGLPVMRDEQDWQILRHHVDEVEELIENINNA*
Ga0099849_123206833300007539AqueousMSAVEGVCLHQIVGELEKIKKSMVMDSREARDELEWQILRNHIDEVEELIENINNA*
Ga0099847_101771573300007540AqueousVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEIEELIENINNA*
Ga0151677_108190333300011258MarineMSAPDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWEILRNHIVEVEELIENINNA*
Ga0129327_1005570613300013010Freshwater To Marine Saline GradientIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEVEELIENINNA*
Ga0180120_1003539123300017697Freshwater To Marine Saline GradientMSAPDGICLHQIVGELEKIKKSLVTDSTEARDELEWQILQNHIDEVEELIENINNA
Ga0181387_101931643300017709SeawaterMSATDGVCLHQIVGELEKIQKSMVMDSREARDELEWQILQNHIDKIEELIENINNA
Ga0181403_102084133300017710SeawaterMSATDGVCLHQIVGELEKIKKSMVMDSREARDELEWQILQNHIDGIEELIENINNA
Ga0181391_112803823300017713SeawaterMSAVEGVCLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA
Ga0181412_115489723300017714SeawaterMSAPEGVCLHQIVGELEKIKKSMVMDSREARDELEWQILQNHIDGIAELIENINNA
Ga0181390_108629143300017719SeawaterMSATDGVCLHQIVGELEKIKKSMVMDSREARDELEWQILQNHIDKIEELIENINNA
Ga0181388_112567033300017724SeawaterCLHQIVGELEKIKKSMVMDSREARDELEWQILQNHIDGIEELIENINNA
Ga0181419_115065123300017728SeawaterMSAVEGVCLHQIVGELEKIKKSMVMDSREARDELEWQILQNHIDGIEELIENINNA
Ga0181426_100516383300017733SeawaterMSAPDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDDVEELIENINNA
Ga0181428_100885123300017738SeawaterMSAPDGICLHQIVGELEKIKKSMVMDFVVMRDEQEWQILRNHVDEIEELIENINNA
Ga0181428_106751323300017738SeawaterMSATDGVCLHQIVGELEEIKKNMVRDSREARDELEWQILQNHIDGIEELIENINNA
Ga0181421_101950663300017741SeawaterMSAPDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNNIDEINELIENINNA
Ga0181421_105668313300017741SeawaterMSAPDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHIDEINELIENINNA
Ga0181427_100209393300017745SeawaterMSATDGVCLHQIVGELEKIQKSMVMDSREARDELEWQILQNHIDGIEELIENINNA
Ga0181414_103614533300017759SeawaterMSALDGICLHQLVGELEKIKKSMVMDLPVMRDEQDWQILRNHVYEIEELIENINNA
Ga0181422_116854713300017762SeawaterMSAPDGICLHQIVDELEKIKKSMVMDLPVMRDEQDWQILRNHVDEINELIENINNA
Ga0181410_102842363300017763SeawaterMSAVEGVCLHQIVGELEKIKKSMVMDSTEARDELEWQILQNHIDGIEELIENINNA
Ga0181394_118710233300017776SeawaterMSATDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNA
Ga0181423_135550413300017781SeawaterMSAPDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEINELIENINNA
Ga0181380_101101963300017782SeawaterMSASDGICLHQLVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0181380_106383643300017782SeawaterMSATDGVCLHQIVGELEKIQKSMVMDSREARDELEWKILQNHIDEIEELIENINNA
Ga0181379_113723433300017783SeawaterMSAPDGICLHQIMGELEKIKKSMVMDLPVMRDEQDWQILRNHVEEIEELIENINNA
Ga0180437_1005600843300017963Hypersaline Lake SedimentMSAVNGICLHQIVGELEKIKKSMVMDFPVMRDEQDWQILRNHVDEIDELIENINNA
Ga0181590_1010648223300017967Salt MarshMSAVEGVCLHQIVGELEKIRKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0180438_1001933343300017971Hypersaline Lake SedimentMSAVNGICLYQIVGELEKIRKSMVMDFPVMRDEQDWQILRNHVDEIDELIENINNA
Ga0180438_1053800133300017971Hypersaline Lake SedimentMSAVNGICLHQIVGELEKIKKSMVMDFPVMRDEQDWQILRNHVDEI
Ga0180433_1043554733300018080Hypersaline Lake SedimentMSAVNGICLHQIVGELEKIKKSMVMDFPVMRDEQDWQILRNHVDEIDELI
Ga0181553_1001896363300018416Salt MarshMSATDGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0181563_10011146153300018420Salt MarshMSAVDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0181592_1030851443300018421Salt MarshMSATDGVCLHQIVGELDKIKKSMVADSTEARDESEWQILQNHIDEIEELIENINNA
Ga0181597_1006023533300020194Salt MarshMSAVDGICLHQIVGELEKIRKSMVMDFPVMRDEQDWQILRNHVDEIDELIENINNA
Ga0213858_1001511233300021356SeawaterMSAVEGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0213858_1001724183300021356SeawaterMSAVDGICLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDE
Ga0213863_1037999223300021371SeawaterMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDELDELIENINNA
Ga0213865_1001272683300021373SeawaterMSAPDGVCLHQIVGELERIKKSMVMDSREARDELEWQILRNHIDELDELIENINNS
Ga0213865_1039848013300021373SeawaterMSAVDGVCLHQIVGELEKIKKSMVMDLVVMRDEQDWQILRNHIDEIEELIENIDNA
Ga0222717_10003440193300021957Estuarine WaterMSATDGVCLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA
Ga0212024_110473313300022065AqueousMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEVEELIENINNA
Ga0196889_108342223300022072AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIDEIEELIENINNA
Ga0196887_102289253300022178AqueousMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDELDELIENINNA
Ga0196887_110834233300022178AqueousVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIKEVEELIENINNA
Ga0196891_103423713300022183AqueousMSAPDGICLHQIVGELEKIKKSMVMDFVVMRDEQDWQILRNHVDEIDELIENINNA
Ga0196899_104588413300022187AqueousMSATDGICLHQIVGELEKIKESMVMDLPVMRDEQDWQILRHHVDE
Ga0228630_103521823300024292SeawaterMSAPDGICLHQIVGELEKIKKSMVMDFPVMRDADDWQILRNHVDEIEELIENINNA
Ga0208667_100227193300025070MarineMSAVEGVCLHQIVRELEKIKKSMVMDFPVMRDADDWQILRHHVDEIEELIENINNA
Ga0208667_100347383300025070MarineMSAVEGVCLHQIVGELEKIKKSMVTDSTEARDELEWQILQNHIDEIEELIENINNA
Ga0208667_101039713300025070MarineMSAVEGVCLHQIVGELEKIKKSMVTDSREARDEFEWQLLQNHIDKIEELIENINNA
Ga0208298_102719133300025084MarineMSAPEGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIEELIENINNA
Ga0208434_101391453300025098MarineMSAPDGVCLHQIVGELEKIKKSMVTDSREARDEFEWQLLQNHIDKIEELIENINNA
Ga0208684_114821943300025305Deep OceanMSAPDGICLHQIMGELEKIKKSMVMDLPVMRDEQDWQILRNHVDEIDE
Ga0208303_101490373300025543AqueousMSAVEGVCLHQIVGELEKIKKSMVMDLPVMRDEQDWQILRNHIDEVDELIENINNA
Ga0208303_106105933300025543AqueousMSAPNGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA
Ga0208134_115571623300025652AqueousMSAVDGVCLHQIVGELEKIKKSMVMDLVVMRDELEWQILQNHIKEVEELIENINNA
Ga0208162_114526623300025674AqueousMSAVEGVCLHQIVGELEKIKKSMVMDSREARDELEWQILRNHIDEVEELIENINNA
Ga0208767_126247433300025769AqueousMSAPDGVCLHQIVGELEKIQKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA
Ga0208645_102677633300025853AqueousMSAPDGICLHQIVGELEKIKESMVMDLPVMRDEQDWQILRHHVDEVEELIENINNA
Ga0208644_130131713300025889AqueousMSAPNGVCLHQIVGELENIKKSMVMDLVVMRDELEWQILRNHIDEVEELIENINNA
Ga0315320_1066521113300031851SeawaterMSAPDGICLHQIVGELEKIKKSMVMDLVVMRDELEWQILRNHIDEINELIENINNA
Ga0348336_005658_1473_16433300034375AqueousMSAPDGICLHQIVGELEKIKESMVMGLPVMRDEQDWQILRHHVDEVEELIENINNA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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