Metagenome Family F089664

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089664
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	71 residues
Representative Sequence	HTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Number of Associated Samples	70
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.98 %
% of genes near scaffold ends (potentially truncated)	92.59 %
% of genes from short scaffolds (< 2000 bps)	89.81 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.037 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.556 % of family members)
Environment Ontology (ENVO)	Unclassified (87.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 76.06% β-sheet: 0.00% Coil/Unstructured: 23.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03401	TctC	9.26
PF00536	SAM_1	7.41
PF02646	RmuC	4.63
PF04392	ABC_sub_bind	3.70
PF13629	T2SS-T3SS_pil_N	2.78
PF13191	AAA_16	1.85
PF00149	Metallophos	1.85
PF00083	Sugar_tr	1.85
PF04780	DUF629	0.93
PF02746	MR_MLE_N	0.93
PF00072	Response_reg	0.93
PF13414	TPR_11	0.93
PF09351	DUF1993	0.93
PF13396	PLDc_N	0.93
PF13474	SnoaL_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	9.26
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	4.63
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.70
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.04 %
Unclassified	root	N/A	37.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.15 %
Unclassified	root	N/A	37.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.96 %
Unclassified	root	N/A	37.96 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.93 %
Roseibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
Cyanothecaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
Roseibium aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium aestuarii	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
Cyanothece	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece	0.93 %
Bradyrhizobium sp. 62	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	0.93 %
Roseibium aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium aestuarii	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
unclassified Cyanothece	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece	0.93 %
Bradyrhizobium sp. 62	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	0.93 %
Roseibium aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium aestuarii	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	22.22 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.63 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.85 %
Cyanothece sp. PCC 7425	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece → Cyanothece sp. PCC 7425	0.93 %
Bradyrhizobium sp. 62	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	0.93 %
Roseibium aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium aestuarii	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10561941	Not Available	665	Open in IMG/M
3300005332\|Ga0066388_101801362	Not Available	1088	Open in IMG/M
3300005332\|Ga0066388_106283698	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005437\|Ga0070710_10503507	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300005713\|Ga0066905_101540808	Not Available	606	Open in IMG/M
3300010046\|Ga0126384_10201435	Not Available	1576	Open in IMG/M
3300010047\|Ga0126382_11481456	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010366\|Ga0126379_10212616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece → Cyanothece sp. PCC 7425	1871	Open in IMG/M
3300010398\|Ga0126383_10502992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1271	Open in IMG/M
3300010398\|Ga0126383_13022134	Not Available	549	Open in IMG/M
3300010398\|Ga0126383_13383128	Not Available	521	Open in IMG/M
3300012210\|Ga0137378_10246777	Not Available	1662	Open in IMG/M
3300012363\|Ga0137390_11572641	Not Available	596	Open in IMG/M
3300016270\|Ga0182036_10647850	Not Available	851	Open in IMG/M
3300016294\|Ga0182041_11899497	Not Available	553	Open in IMG/M
3300016319\|Ga0182033_12116213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300016341\|Ga0182035_10528413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300016341\|Ga0182035_11041656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300016357\|Ga0182032_10769598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300016371\|Ga0182034_10509041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium aestuarii	1005	Open in IMG/M
3300016371\|Ga0182034_11798272	Not Available	540	Open in IMG/M
3300016371\|Ga0182034_12043143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300016404\|Ga0182037_10227767	Not Available	1462	Open in IMG/M
3300016404\|Ga0182037_10331695	Not Available	1233	Open in IMG/M
3300016404\|Ga0182037_11674661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300016404\|Ga0182037_12067012	Not Available	512	Open in IMG/M
3300016422\|Ga0182039_11350430	Not Available	647	Open in IMG/M
3300016422\|Ga0182039_11786433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300016422\|Ga0182039_12012968	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300016422\|Ga0182039_12067571	Not Available	524	Open in IMG/M
3300016422\|Ga0182039_12256132	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300016445\|Ga0182038_10725924	Not Available	867	Open in IMG/M
3300016445\|Ga0182038_10757644	Not Available	849	Open in IMG/M
3300031545\|Ga0318541_10598950	Not Available	616	Open in IMG/M
3300031546\|Ga0318538_10070922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1750	Open in IMG/M
3300031546\|Ga0318538_10183243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1114	Open in IMG/M
3300031549\|Ga0318571_10363692	Not Available	557	Open in IMG/M
3300031561\|Ga0318528_10617091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031564\|Ga0318573_10517785	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300031564\|Ga0318573_10571907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300031573\|Ga0310915_10078776	Not Available	2186	Open in IMG/M
3300031573\|Ga0310915_10159309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1564	Open in IMG/M
3300031573\|Ga0310915_10200947	Not Available	1394	Open in IMG/M
3300031640\|Ga0318555_10358109	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300031668\|Ga0318542_10414180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300031680\|Ga0318574_10050465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2187	Open in IMG/M
3300031680\|Ga0318574_10766499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300031681\|Ga0318572_10137095	Not Available	1407	Open in IMG/M
3300031682\|Ga0318560_10261982	Not Available	929	Open in IMG/M
3300031719\|Ga0306917_10204393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300031719\|Ga0306917_10747824	Not Available	767	Open in IMG/M
3300031744\|Ga0306918_10744151	Not Available	766	Open in IMG/M
3300031747\|Ga0318502_10250183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300031748\|Ga0318492_10629243	Not Available	573	Open in IMG/M
3300031751\|Ga0318494_10357237	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031770\|Ga0318521_10176386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1225	Open in IMG/M
3300031770\|Ga0318521_10346770	Not Available	879	Open in IMG/M
3300031771\|Ga0318546_10628361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	755	Open in IMG/M
3300031779\|Ga0318566_10284753	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031780\|Ga0318508_1082334	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031794\|Ga0318503_10104802	Not Available	899	Open in IMG/M
3300031795\|Ga0318557_10493298	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300031833\|Ga0310917_10294199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300031835\|Ga0318517_10174220	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300031835\|Ga0318517_10335901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300031846\|Ga0318512_10382002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300031846\|Ga0318512_10390002	Not Available	699	Open in IMG/M
3300031860\|Ga0318495_10257659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300031897\|Ga0318520_10047128	All Organisms → cellular organisms → Bacteria → Proteobacteria	2249	Open in IMG/M
3300031897\|Ga0318520_11045867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300031910\|Ga0306923_10325758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1753	Open in IMG/M
3300031910\|Ga0306923_11270940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	782	Open in IMG/M
3300031910\|Ga0306923_11599602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	677	Open in IMG/M
3300031910\|Ga0306923_12438498	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031912\|Ga0306921_11878657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300031941\|Ga0310912_10017609	All Organisms → cellular organisms → Bacteria → Proteobacteria	4666	Open in IMG/M
3300031946\|Ga0310910_10120243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1976	Open in IMG/M
3300031946\|Ga0310910_10171120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1672	Open in IMG/M
3300031946\|Ga0310910_10575066	Not Available	893	Open in IMG/M
3300031947\|Ga0310909_11294328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300031954\|Ga0306926_10161441	Not Available	2777	Open in IMG/M
3300031954\|Ga0306926_11408422	Not Available	808	Open in IMG/M
3300031954\|Ga0306926_12261990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031959\|Ga0318530_10093019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1191	Open in IMG/M
3300032009\|Ga0318563_10086111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1647	Open in IMG/M
3300032025\|Ga0318507_10405979	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300032035\|Ga0310911_10437148	Not Available	757	Open in IMG/M
3300032041\|Ga0318549_10260004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300032042\|Ga0318545_10038294	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300032044\|Ga0318558_10070731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300032051\|Ga0318532_10223369	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032055\|Ga0318575_10100746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1400	Open in IMG/M
3300032059\|Ga0318533_10198175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1437	Open in IMG/M
3300032059\|Ga0318533_10453745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300032059\|Ga0318533_11145299	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032065\|Ga0318513_10643870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300032076\|Ga0306924_10524222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 62	1347	Open in IMG/M
3300032094\|Ga0318540_10108505	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300032261\|Ga0306920_102364428	Not Available	734	Open in IMG/M
3300032261\|Ga0306920_102860651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300033289\|Ga0310914_10370417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1295	Open in IMG/M
3300033289\|Ga0310914_11009364	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.44%
Loam	Environmental → Terrestrial → Soil → Loam	5.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105619411	3300004633	Tropical Forest Soil	ALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRHESHEGRAGH*
Ga0066388_1008387953	3300005332	Tropical Forest Soil	RKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAMSKHRDESHEGRGGH*
Ga0066388_1018013621	3300005332	Tropical Forest Soil	KEKIVKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSKQVSKLSEAQEAVAAAVSKHSDKPDPLSDFAKKP*
Ga0066388_1062836982	3300005332	Tropical Forest Soil	TAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDEGHEGGAGH*
Ga0070710_105035072	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LNAQIEKLKKRKAQLPRELQSIVDRLATSFATASNQVSKLSEAQEAVAAAVSQHRGESHEGHR*
Ga0066905_1015408081	3300005713	Tropical Forest Soil	ALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDEGHEGGAGH*
Ga0126384_102014351	3300010046	Tropical Forest Soil	EEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRHESHEGRAGH*
Ga0126382_114814561	3300010047	Tropical Forest Soil	AVKELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVGKLSVAQEAVAAAVSKHRVESHEGGAGH*
Ga0126379_102126161	3300010366	Tropical Forest Soil	LGDAKEKIVKAEEEKTALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRHESHEGRAGH*
Ga0126383_105029922	3300010398	Tropical Forest Soil	MKRREFITLLGGTAATVKELNAQIEKLTKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKDRDESHEGRAGH*
Ga0126383_130221341	3300010398	Tropical Forest Soil	KELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRHESHEGRAGH*
Ga0126383_133831282	3300010398	Tropical Forest Soil	VKELNAQIEKLKKRKAQLPRELQSIVDRLTTSSATASNQVSKLGEAQEAVAAAVSKHRDESHEGRLQSSGN*
Ga0137378_102467771	3300012210	Vadose Zone Soil	EKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH*
Ga0137390_115726412	3300012363	Vadose Zone Soil	ALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRARH*
Ga0182036_106478501	3300016270	Soil	LKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0182041_118994971	3300016294	Soil	LHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0182033_121162131	3300016319	Soil	KTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0182035_105284131	3300016341	Soil	AKEKIVKAAEEKTALHTTVKELNAQIENLKKRKAQLPRELQSIVDRLATLSATASNQVSKLSEAQEAAALSKHRDDSHEGRAGH
Ga0182035_110416561	3300016341	Soil	EEKTALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0182032_107695981	3300016357	Soil	LGDAKEKIGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRADH
Ga0182034_105090412	3300016371	Soil	GKTEEEKTALHTTAKELNAQIEKLKKRKAQLPRELQSIVDRLATLSATASNQVSKLSEAQEAAALSKHRDDSHEGRAGH
Ga0182034_117982722	3300016371	Soil	AQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0182034_120431431	3300016371	Soil	TAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0182037_102277671	3300016404	Soil	EKIGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0182037_103316954	3300016404	Soil	LHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSQLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0182037_116746611	3300016404	Soil	KAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0182037_120670122	3300016404	Soil	IEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAG
Ga0182039_113504301	3300016422	Soil	AQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSQLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0182039_117864331	3300016422	Soil	AEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0182039_120129681	3300016422	Soil	AEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0182039_120675711	3300016422	Soil	VKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0182039_122561321	3300016422	Soil	KTALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0182038_107259241	3300016445	Soil	KKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0182038_107576441	3300016445	Soil	ALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSFATASNQVSKLSEAQEAVAAAVAKHRDESHEGRLQSSGN
Ga0318541_105989502	3300031545	Soil	ALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0318538_100709223	3300031546	Soil	EKTALHTAVKELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAGH
Ga0318538_101832431	3300031546	Soil	AEEEKTAVHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318571_103636921	3300031549	Soil	EEKTALHTAVQELDAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318528_102502661	3300031561	Soil	KKRKSQLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAGH
Ga0318528_106170911	3300031561	Soil	NAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0318573_105177851	3300031564	Soil	TLHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0318573_105719071	3300031564	Soil	TTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0310915_100787761	3300031573	Soil	VKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSQLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0310915_101593091	3300031573	Soil	KLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0310915_102009471	3300031573	Soil	VKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0318555_103581093	3300031640	Soil	EKIVKAAEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0318542_104141801	3300031668	Soil	ELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0318574_100504651	3300031680	Soil	AQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318574_107664992	3300031680	Soil	RLGDAKEKIVKAEEEKTALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0318572_101370951	3300031681	Soil	AVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318560_102619821	3300031682	Soil	EKTALHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0306917_102043931	3300031719	Soil	EKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0306917_107478242	3300031719	Soil	ELNAPIEKLKKRKAQLPRELQSIIDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAD
Ga0306918_107441512	3300031744	Soil	ELNAQIEKLKKRKAQLPRELQSIIDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAD
Ga0318502_102501832	3300031747	Soil	AVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318492_106292431	3300031748	Soil	EEEKTALHTAVKELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVSKLSEAQGAVAAAVSKHRVESHEGGAGH
Ga0318494_103572371	3300031751	Soil	AQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318509_100489351	3300031768	Soil	LKKRKSQLPRELQSIVDRLATSSATASNQVSKLSEAQGAVAAAVSKHRVESHEGGAGH
Ga0318521_101763863	3300031770	Soil	ERLGDAKEKIGKTEEEKTALHTTVKELNAQIENLKKRKAQLPRELQSIVDRLATLSATASNQVSKLSEAQEAAALSKHRDDSHEGRAGH
Ga0318521_103467701	3300031770	Soil	EKIVKAEEEKTGLHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318546_106283611	3300031771	Soil	EEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0318566_102847533	3300031779	Soil	ALHTAVKELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVSKLSEAQGAVAAAVSKHRVESHEGGAGH
Ga0318508_10823342	3300031780	Soil	TAVQELDAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318503_101048021	3300031794	Soil	HTAVQELDAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318557_104932981	3300031795	Soil	KELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0310917_102941993	3300031833	Soil	NTTVKELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0318517_101742202	3300031835	Soil	IGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0318517_103359013	3300031835	Soil	HTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRADH
Ga0318512_103820021	3300031846	Soil	RLGDAKEKIVKAEEEKTALHAAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0318512_103900022	3300031846	Soil	EEEKTALHMTVKELNTQIENLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDEPDPSDFVKKP
Ga0318495_102576591	3300031860	Soil	LKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0318520_100471281	3300031897	Soil	EEKTALHTTVKELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0318520_110458671	3300031897	Soil	KKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRADH
Ga0306923_103257581	3300031910	Soil	RKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0306923_112709401	3300031910	Soil	EKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0306923_115996021	3300031910	Soil	QIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVTNLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0306923_124384982	3300031910	Soil	AQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0306921_118786571	3300031912	Soil	AREKIGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0310912_1001760912	3300031941	Soil	EEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0310910_101202431	3300031946	Soil	KEKIVKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0310910_101711201	3300031946	Soil	EKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0310910_105750663	3300031946	Soil	ELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0310909_112943281	3300031947	Soil	HTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQEAVAAAMSKHRDESHEGRAGH
Ga0306926_101614417	3300031954	Soil	QIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSQLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0306926_114084223	3300031954	Soil	KEKIAKAEEEKTGLHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATTSNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0306926_122619902	3300031954	Soil	KRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQDAVAAAVSKHRDENHEGRAGH
Ga0318530_100930193	3300031959	Soil	PRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318563_100861112	3300032009	Soil	VQELDAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318507_104059791	3300032025	Soil	AKEKIVKAAEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSSVDRLATSSATASNQASKLSEAQEAVAAAVSKHRDESHKGRVGH
Ga0310911_104371481	3300032035	Soil	APIEKLKKRKAQLPRELQSIIDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAD
Ga0318549_102600044	3300032041	Soil	LHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRADH
Ga0318545_100382941	3300032042	Soil	DAKEKIGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0318558_100707312	3300032044	Soil	EKTAVHTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVDAAVSKHRDESHEG
Ga0318532_102233692	3300032051	Soil	TAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSKLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0318575_101007463	3300032055	Soil	QIEKLKKRKSQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0318533_101981751	3300032059	Soil	LHTAVKELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNRVSKLSEAQGAVAAAVSKHRVESHEGGAGH
Ga0318533_104537451	3300032059	Soil	KTEEEKTALHTTVKELNAQIENLKKRKAQLPRELQSIVDRLATLSATASNQVSKLSEAQEAAALSKHRDDSHEGRAGH
Ga0318533_111452991	3300032059	Soil	KAQLPRELQSIIDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAD
Ga0318510_100640981	3300032064	Soil	EKLKKRKSQLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAGH
Ga0318513_106438702	3300032065	Soil	HTAVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRAGH
Ga0318553_102797833	3300032068	Soil	IEKLKKRKSQLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAG
Ga0306924_105242224	3300032076	Soil	KAEEEKTAPHMTVKELNTQIENLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDEPDPSDFVKKP
Ga0318540_100232801	3300032094	Soil	QLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAGH
Ga0318540_101085051	3300032094	Soil	KTALHTAVKELNAQIEKLKKRKAQLPRELQSIIDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGGAGH
Ga0306920_1023644281	3300032261	Soil	ELNAQIEKLKKRKAQLPRELQSIVDRLAMSSATASNQVSQLSEAQNAVAAAVSKHRDENHDGQAGH
Ga0306920_1028606511	3300032261	Soil	EKIGKAEEEKTALHTTVKELNAQIEKLKKRKAQLPRELQSIVDRLATSSATASNQVSKLSEAQEAVAAAVSKHRDESHEGRADH
Ga0310914_103704171	3300033289	Soil	KELNAQIEKLKKRKSQLPRELQSIVDRLATSSATASNQVGKLSEAQEAVADAVSKHRVESHEGGAGH
Ga0310914_110093641	3300033289	Soil	GDAKEKIGKTEEEKTALHTTVKELNAQIENLKKRKAQLPRELQSIVDRLATLSATASNQVSKLSEAQEAAALSKHRDDSHEGRAGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089664

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences