Metagenome Family F087376

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087376
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	158 residues
Representative Sequence	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.82 %
% of genes near scaffold ends (potentially truncated)	48.18 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (8.182 % of family members)
Environment Ontology (ENVO)	Unclassified (60.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (84.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.88% β-sheet: 37.50% Coil/Unstructured: 47.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01872	RibD_C	30.00
PF13671	AAA_33	13.64
PF03551	PadR	6.36
PF12704	MacB_PCD	5.45
PF02687	FtsX	3.64
PF00144	Beta-lactamase	1.82
PF00903	Glyoxalase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	30.00
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	30.00
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	6.36
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	6.36
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	6.36
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19.09 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	8.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	19.09 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.73 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	14.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.73 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	14.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.73 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	14.55 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.73 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Variovorax sp. Sphag1AA	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	14.55 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.73 %
Gemmatimonadetes bacterium 13_2_20CM_70_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10378680	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300004156\|Ga0062589_101729507	Not Available	625	Open in IMG/M
3300004479\|Ga0062595_100788897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	780	Open in IMG/M
3300005093\|Ga0062594_100492020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	1033	Open in IMG/M
3300005290\|Ga0065712_10144962	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005329\|Ga0070683_100007978	All Organisms → cellular organisms → Bacteria	8982	Open in IMG/M
3300005330\|Ga0070690_100009592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5612	Open in IMG/M
3300005330\|Ga0070690_100327802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1105	Open in IMG/M
3300005332\|Ga0066388_102682547	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005335\|Ga0070666_10957102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	634	Open in IMG/M
3300005343\|Ga0070687_100050123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2155	Open in IMG/M
3300005344\|Ga0070661_101200449	Not Available	634	Open in IMG/M
3300005355\|Ga0070671_100069854	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300005364\|Ga0070673_100808763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	866	Open in IMG/M
3300005367\|Ga0070667_100358162	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300005367\|Ga0070667_101032572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	767	Open in IMG/M
3300005439\|Ga0070711_100457881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1045	Open in IMG/M
3300005456\|Ga0070678_101465143	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	638	Open in IMG/M
3300005457\|Ga0070662_100198987	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300005458\|Ga0070681_10054127	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300005535\|Ga0070684_100016617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6018	Open in IMG/M
3300005539\|Ga0068853_100041734	All Organisms → cellular organisms → Bacteria	3921	Open in IMG/M
3300005547\|Ga0070693_100000912	All Organisms → cellular organisms → Bacteria	13135	Open in IMG/M
3300005614\|Ga0068856_102395533	Not Available	535	Open in IMG/M
3300005616\|Ga0068852_100689231	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005617\|Ga0068859_100498694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	1313	Open in IMG/M
3300005719\|Ga0068861_102490078	Not Available	521	Open in IMG/M
3300005841\|Ga0068863_100643562	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300005842\|Ga0068858_102110032	Not Available	557	Open in IMG/M
3300005843\|Ga0068860_101235078	Not Available	768	Open in IMG/M
3300006237\|Ga0097621_100008028	All Organisms → cellular organisms → Bacteria	7577	Open in IMG/M
3300006358\|Ga0068871_100576529	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300006904\|Ga0075424_100213715	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300006914\|Ga0075436_101077715	Not Available	604	Open in IMG/M
3300009093\|Ga0105240_10919417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	940	Open in IMG/M
3300009094\|Ga0111539_11074245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	935	Open in IMG/M
3300009098\|Ga0105245_10028490	All Organisms → cellular organisms → Bacteria	4928	Open in IMG/M
3300009098\|Ga0105245_11712287	Not Available	681	Open in IMG/M
3300009101\|Ga0105247_10442024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	936	Open in IMG/M
3300009101\|Ga0105247_10916500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	678	Open in IMG/M
3300009148\|Ga0105243_11371219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	727	Open in IMG/M
3300009174\|Ga0105241_10033693	All Organisms → cellular organisms → Bacteria	3846	Open in IMG/M
3300009174\|Ga0105241_11073290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	757	Open in IMG/M
3300009176\|Ga0105242_10059171	All Organisms → cellular organisms → Bacteria	3142	Open in IMG/M
3300009177\|Ga0105248_10001497	All Organisms → cellular organisms → Bacteria	26012	Open in IMG/M
3300009177\|Ga0105248_10264648	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300010375\|Ga0105239_13304510	Not Available	525	Open in IMG/M
3300010399\|Ga0134127_10172344	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300010399\|Ga0134127_12685473	Not Available	578	Open in IMG/M
3300010400\|Ga0134122_12323506	Not Available	582	Open in IMG/M
3300012915\|Ga0157302_10271580	Not Available	645	Open in IMG/M
3300012955\|Ga0164298_11084772	Not Available	598	Open in IMG/M
3300013100\|Ga0157373_10039695	All Organisms → cellular organisms → Bacteria	3369	Open in IMG/M
3300013102\|Ga0157371_10014073	All Organisms → cellular organisms → Bacteria	6052	Open in IMG/M
3300013105\|Ga0157369_10529772	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300013105\|Ga0157369_10908526	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300013297\|Ga0157378_10449629	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300013307\|Ga0157372_10144433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2744	Open in IMG/M
3300013308\|Ga0157375_10179786	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300013308\|Ga0157375_12013069	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300013308\|Ga0157375_12970323	Not Available	566	Open in IMG/M
3300014325\|Ga0163163_10258931	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300014325\|Ga0163163_10517245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	1256	Open in IMG/M
3300014745\|Ga0157377_10637856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	765	Open in IMG/M
3300014969\|Ga0157376_11358731	Not Available	741	Open in IMG/M
3300015262\|Ga0182007_10383969	Not Available	533	Open in IMG/M
3300015371\|Ga0132258_10212751	All Organisms → cellular organisms → Bacteria	4697	Open in IMG/M
3300015371\|Ga0132258_10784572	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300015371\|Ga0132258_11879066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	1508	Open in IMG/M
3300015372\|Ga0132256_101168789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300015373\|Ga0132257_100070042	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300015373\|Ga0132257_100133722	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300015373\|Ga0132257_100593613	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300015374\|Ga0132255_100009140	All Organisms → cellular organisms → Bacteria	11498	Open in IMG/M
3300015374\|Ga0132255_101693936	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300017792\|Ga0163161_11194876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9	657	Open in IMG/M
3300019361\|Ga0173482_10042718	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300021445\|Ga0182009_10014943	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300024055\|Ga0247794_10002247	All Organisms → cellular organisms → Bacteria	3868	Open in IMG/M
3300025321\|Ga0207656_10147663	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300025903\|Ga0207680_11018985	Not Available	593	Open in IMG/M
3300025911\|Ga0207654_10005433	All Organisms → cellular organisms → Bacteria	6444	Open in IMG/M
3300025916\|Ga0207663_10468818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	974	Open in IMG/M
3300025917\|Ga0207660_11654165	Not Available	515	Open in IMG/M
3300025920\|Ga0207649_10263204	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300025924\|Ga0207694_11328983	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300025927\|Ga0207687_10056447	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300025930\|Ga0207701_10803600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	792	Open in IMG/M
3300025932\|Ga0207690_10287974	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300025934\|Ga0207686_10080673	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300025934\|Ga0207686_10081586	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300025936\|Ga0207670_11252426	Not Available	628	Open in IMG/M
3300025940\|Ga0207691_11285677	Not Available	604	Open in IMG/M
3300025941\|Ga0207711_10611272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1017	Open in IMG/M
3300025960\|Ga0207651_10717151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	882	Open in IMG/M
3300025961\|Ga0207712_11204222	Not Available	676	Open in IMG/M
3300025986\|Ga0207658_10357306	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300025986\|Ga0207658_10406219	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300026035\|Ga0207703_10771557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	917	Open in IMG/M
3300026035\|Ga0207703_10956855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	821	Open in IMG/M
3300026078\|Ga0207702_10677767	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300026121\|Ga0207683_11407849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	645	Open in IMG/M
3300026142\|Ga0207698_10989627	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300026861\|Ga0207503_1011345	Not Available	558	Open in IMG/M
3300026905\|Ga0207516_1006199	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300027907\|Ga0207428_10153472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	1752	Open in IMG/M
3300028381\|Ga0268264_11580863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. Sphag1AA	666	Open in IMG/M
3300030496\|Ga0268240_10204387	Not Available	506	Open in IMG/M
3300031716\|Ga0310813_10210187	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300032421\|Ga0310812_10418168	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	72.73%
Environmental	Environmental	27.27%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	72.73%
Terrestrial	Environmental → Terrestrial	27.27%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	45.45%
Soil	Environmental → Terrestrial → Soil	27.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.64%
Roots	Host-Associated → Plants → Roots	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.18%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.36%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.18%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300026905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_103786802	3300003324	Sugarcane Root And Bulk Soil	MLALVAGAALGACSGYDNSQATDPNNSIAAGVLTIALPKSVYTAPELNPSSGQGVRATLGNTSDQPYYSLLGDAFNGAIDQNPLFVSNGSDASLEREQGSDWVAVSGVQMVEGVKVVSIQPGKSYDLIAHSGAATTGRYRIVVAYRNSMSAEPTRRVVSATFEVR*
Ga0062589_1017295071	3300004156	Soil	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0062595_1007888972	3300004479	Soil	LTLLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVALSGAQLIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0062594_1004920201	3300005093	Soil	TNSIAAGQLTITLPKNIYTTTDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPVYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPTRRTTSATFEVR*
Ga0065712_101449622	3300005290	Miscanthus Rhizosphere	MKNRMLTFLVAGALSACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0070683_1000079784	3300005329	Corn Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0070690_1000095925	3300005330	Switchgrass Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0070690_1003278021	3300005330	Switchgrass Rhizosphere	SWASMKNRMLTFLVAGALSACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0066388_1026825472	3300005332	Tropical Forest Soil	MLAACSGYDNSPATDPTDSIAAGVLTIALPKNIYTTAELNPSSGQGVRATLGNTADQNFYSRVGDAFNFNIEQNPLFVANGSDASLERVQGSDWVSVSGVQLVEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSATADATRRVVSATFEVR*
Ga0070666_109571022	3300005335	Switchgrass Rhizosphere	LPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0070687_1000501233	3300005343	Switchgrass Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRY
Ga0070661_1012004492	3300005344	Corn Rhizosphere	ATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0070671_1000698543	3300005355	Switchgrass Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQ
Ga0070673_1008087632	3300005364	Switchgrass Rhizosphere	AGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRTSAAAEPTRRAVSATFEVR*
Ga0070667_1003581621	3300005367	Switchgrass Rhizosphere	MLVLLFSGVLAACSGSDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0070667_1010325722	3300005367	Switchgrass Rhizosphere	PSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0070711_1004578812	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHGWADMTKRIFALLVGGALAACSGYDNGQATDPTNSIAAGQITIALPKTVYTTTELNPSSGPGVRATLGNTADQAFYSRLGDAFNGALDQNPLFVANGSDASLEREQGSDWVAVTGAVLIEGVKVVSLQPGKSYDLIAQTSAATAGRYRIVVAYRNSATAEPTQRAVSATFEVR*
Ga0070678_1014651431	3300005456	Miscanthus Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQ
Ga0070662_1001989873	3300005457	Corn Rhizosphere	MTNRIALLVVGLAVACSGYDDSQATDPTNSIAAGQLTITLPKNIYTATDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPARRTTSATFEVR*
Ga0070681_100541271	3300005458	Corn Rhizosphere	AMRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0070684_1000166172	3300005535	Corn Rhizosphere	MLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0068853_1000417343	3300005539	Corn Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSAASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0070693_1000009127	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR*
Ga0068856_1023955332	3300005614	Corn Rhizosphere	TADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0068852_1006892312	3300005616	Corn Rhizosphere	MLGLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0068859_1004986942	3300005617	Switchgrass Rhizosphere	MLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0068861_1024900782	3300005719	Switchgrass Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRI
Ga0068863_1006435622	3300005841	Switchgrass Rhizosphere	MKNRMLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0068858_1021100322	3300005842	Switchgrass Rhizosphere	YTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGPDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0068860_1012350781	3300005843	Switchgrass Rhizosphere	MKNRMLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0097621_1000080284	3300006237	Miscanthus Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0068871_1005765292	3300006358	Miscanthus Rhizosphere	MKTRILGLLLGGALAACSGNDNAQATDPTNSIAAGQVTITLPKNVYTTTDLNPASGQGVRATLGNTADQPFYSMLGDAFNGAIEQNPLFVANGSDASLEREQGSDWVPVTGVQMIEGVKVVSLQPGKSYELIAHSSGATAGRYRIVVAYRNSATADPTRRVVSGIFEVR*
Ga0075424_1002137152	3300006904	Populus Rhizosphere	MLGLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSNGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0075436_1010777152	3300006914	Populus Rhizosphere	SMKNRMLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGAQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRATSATFEVR*
Ga0105240_109194172	3300009093	Corn Rhizosphere	MRSWAGIRNRLLALLVGGALAGCSGSGNRQTTDPIDSIVAGQLTIALSKTSYNVSDLNPSSGGVRATLGNTADQTFFSMIGDAFNGAIEQNPLYVANGSDASLERQQGSDWVAVNGVQMIEGVKVVSILPGKSYDLVVQSSAATPGNYRIVIAYRTTATASATRRAVSATFEVR*
Ga0111539_110742452	3300009094	Populus Rhizosphere	GQLTITLPKNIYTATDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPARRTTSATFEVR*
Ga0105245_100284904	3300009098	Miscanthus Rhizosphere	MKNRVLTLLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0105245_117122871	3300009098	Miscanthus Rhizosphere	MKNRMLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGAQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0105247_104420242	3300009101	Switchgrass Rhizosphere	FSGVLAACSGSDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRTSAAAEPTRRAVSATFEVR*
Ga0105247_109165001	3300009101	Switchgrass Rhizosphere	SGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0105243_113712192	3300009148	Miscanthus Rhizosphere	KNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0105241_100336933	3300009174	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYSNTQNAEPTRRVTSAIFEVR*
Ga0105241_110732902	3300009174	Corn Rhizosphere	TIALSKSTYSTSELNPSSGGVRATLGNTADQTFYSMIGDAFNGAAEQNPLYVANGSDASLERQQGSDWVVVTGVQMVEGVKIVSIRPGKSYDLIVQSSAATAGNYRIVVAYRNTATGSASLRSVSPTFEVR*
Ga0105242_100591714	3300009176	Miscanthus Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR*
Ga0105248_1000149714	3300009177	Switchgrass Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0105248_102646483	3300009177	Switchgrass Rhizosphere	MKNRMLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRTSAAAEPTRRAVSATFEVR*
Ga0105239_133045102	3300010375	Corn Rhizosphere	AGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0134127_101723441	3300010399	Terrestrial Soil	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR*
Ga0134127_126854731	3300010399	Terrestrial Soil	MTNRIALLVVGLAAACSGYDDSQATDPTNSIAAGQLTITLPKNIYTTTDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVALSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPTRRATSATFEVR*
Ga0134122_123235061	3300010400	Terrestrial Soil	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR
Ga0157302_102715801	3300012915	Soil	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTLRVTSAIFEVR*
Ga0164298_110847722	3300012955	Soil	PTSSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSNGAIAGVYRIVVAYRTSATADPTRRVTSATFEVR*
Ga0157373_100396953	3300013100	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLVAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0157371_100140735	3300013102	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLVADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR*
Ga0157369_105297722	3300013105	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRY
Ga0157369_109085262	3300013105	Corn Rhizosphere	MKTRILGLLLGGALAACSGNGNAQATDPTNSIAAGQVTITLPKNVYTTTDLNPASGQGVRATLGNTADKPFYSMLGDAFNGAIEQNPLFVANGSDASLEREQGSDWVPVTGVQMIEGVKVVSLQPGKSYELIAHSSGATAGRYRIVVAYRNSATADPTRRVVSGIFEVR*
Ga0157378_104496292	3300013297	Miscanthus Rhizosphere	VITIALPKNIYTTTELNPSSGQGIRAMLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYSNSAAAEPTRRAVSATFEVR*
Ga0157372_101444331	3300013307	Corn Rhizosphere	LTIALSKTSYNVSDLNPSSGGVRATLGNTADQTFFSMIGDAFNGAIEQNPLYVANGSDASLERQQGSDWVAVNGVQMIEGVKVVSILPGKSYDLVVQSGAATPGNYRIVIAYRTTATASATRRAVSATFEVR*
Ga0157375_101797862	3300013308	Miscanthus Rhizosphere	MKNRMLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVISIKPGQSYELIAHSSGATAGNYRIVVAYRTSAAAEPTRRAVSATFEVR*
Ga0157375_120130692	3300013308	Miscanthus Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSA
Ga0157375_129703232	3300013308	Miscanthus Rhizosphere	ITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0163163_102589311	3300014325	Switchgrass Rhizosphere	AGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0163163_105172451	3300014325	Switchgrass Rhizosphere	MKNRMLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGETAGNYRIVVAYRTSAAAEPTRRAVSATFEVR*
Ga0157377_106378561	3300014745	Miscanthus Rhizosphere	TTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0157376_113587311	3300014969	Miscanthus Rhizosphere	MKNRLMTLLVAGALAACSGYGNSTATDPTNSIVAGQLTITLPKNVYTVADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSNGAIAGVYRIVVAYRTSETAEPTRRVTSATFEVR*
Ga0182007_103839692	3300015262	Rhizosphere	ITLPRTVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR*
Ga0132258_102127513	3300015371	Arabidopsis Rhizosphere	MLALLFSGLLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSAIFEVR*
Ga0132258_107845724	3300015371	Arabidopsis Rhizosphere	SIAAGQLTITLPKNIYTATDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPARRTTSATFEVR*
Ga0132258_118790663	3300015371	Arabidopsis Rhizosphere	MYSRIGLLVVGLAVACSGYDNSQATDPTNSIAAGQLTIALPKSVYTTAELNPASGQGIRATLGNTADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSGWAAVSGVQMVEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSASAEPTRRATSATFEVR*
Ga0132256_1011687892	3300015372	Arabidopsis Rhizosphere	MSIRILTGLVALLGAGCASSDRETTNPTIAAGEVTITLPKTSYSTSDLSPSSGQGVRATLGNAADQPFYSMIGDAFNGAAEQSPLFVAVGSDASIEREEGSAWVAVTSAHLVEGVKVVSRLPGKSYELIALASPVTAGRYRIVVGYRDAPNSAP
Ga0132257_1000700423	3300015373	Arabidopsis Rhizosphere	MTNRIALLVVGLAVACSGYDDSQATDPTNSIAAGQLTITLPKNIYTTTDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPVYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAGPTRRTTSATFEVR*
Ga0132257_1001337224	3300015373	Arabidopsis Rhizosphere	MSIRILTGLVALLVAGCASSDRETTNPTIAAGEVTITLPKTTYTASDLSPSSGQGVRATLANAADQPFYSMIGDAFNGAAEQSPLFVAVGSDASIEREEGSAWVAVTSAHLIEGVKVVSLLPGKSYELIALASPVTAGRYRIVVGYRDAPNSAPSRRAVSAIFEVH*
Ga0132257_1005936132	3300015373	Arabidopsis Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGLDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR*
Ga0132255_1000091404	3300015374	Arabidopsis Rhizosphere	MTNRIALLVVGLAVACSGYDDSQATDPTNSIAAGQLTITLPKNIYTTTDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPARRTTSATFEVR*
Ga0132255_1016939362	3300015374	Arabidopsis Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRN
Ga0163161_111948761	3300017792	Switchgrass Rhizosphere	MLALLFSGVLAACSGNDNSPSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSRLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPT
Ga0173482_100427182	3300019361	Soil	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGAAAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0182009_100149433	3300021445	Soil	MLTFLVAGALSACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR
Ga0247794_100022472	3300024055	Soil	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0207656_101476632	3300025321	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0207680_110189852	3300025903	Switchgrass Rhizosphere	LPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0207654_100054334	3300025911	Corn Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0207663_104688182	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MHGWADMTKRIFALLVGGALAACSGYDNGQATDPTNSIAAGQITIALPKTVYTTTELNPSSGPGVRATLGNTADQAFYSRLGDAFNGALDQNPLFVANGSDASLEREQGSDWVAVTGAVLIEGVKVVSLQPGKSYDLIAQTSAATAGRYRIVVAYRNSATAEPTQRAVSATFEVR
Ga0207660_116541651	3300025917	Corn Rhizosphere	LAACSGNDNAQATDPTNSIAAGQVTITLPKNVYTTTDLNPASGQGVRATLGNTADQPFYSMLGDAFNGAIEQNPLFVANGSDASLEREQGSDWVPVTGVQMIEGVKVVSLQPGKSYELIAHSSGATAGRYRIVVAYRNSATADPTRRVVSGIFEVR
Ga0207649_102632043	3300025920	Corn Rhizosphere	GYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR
Ga0207694_113289832	3300025924	Corn Rhizosphere	MKTRILGLLLGGALAACSGNDNAQATDPTNSIAAGQVTITLPKNVYTTTDLNPASGQGVRATLGNTADQPFYSMLGDAFNGAIEQNPLFVANGSDASLEREQGSDWVPVTGVQMIEGVKVVSLQPGKSYELIAHSSGATAGRYRIVVAYRNSATADPT
Ga0207687_100564473	3300025927	Miscanthus Rhizosphere	MLVLLFSGVLAACSGSDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0207701_108036002	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRMLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAIDQSPLFVANGSDASLERQQGSGWVAVTGMQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR
Ga0207690_102879742	3300025932	Corn Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAG
Ga0207686_100806732	3300025934	Miscanthus Rhizosphere	MKNRMLALLFSGVLAACSGNDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0207686_100815862	3300025934	Miscanthus Rhizosphere	MRSWASMKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQNAEPTRRVTSAIFEVR
Ga0207670_112524261	3300025936	Switchgrass Rhizosphere	GVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATSGNYRIVVAYRTSAAAEPTRRAVSATFEVR
Ga0207691_112856771	3300025940	Miscanthus Rhizosphere	MKNRMLTFLVAGALSACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSAT
Ga0207711_106112722	3300025941	Switchgrass Rhizosphere	MKNRMLTFLVAGALSACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR
Ga0207651_107171512	3300025960	Switchgrass Rhizosphere	NSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRTSAAAEPTRRAVSATFEVR
Ga0207712_112042221	3300025961	Switchgrass Rhizosphere	MTNRIALLVVGLAVACSGYDDSQATDPTNSIAAGQLTITLPKNIYTTTELNPLSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNS
Ga0207658_103573062	3300025986	Switchgrass Rhizosphere	MKNRMLVLLFSGVLAACSGSDNSQSSTDPTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0207658_104062191	3300025986	Switchgrass Rhizosphere	SDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0207703_107715571	3300026035	Switchgrass Rhizosphere	MLTLLVAGALAACSGYDNSTATDPTNSIVAGQLTITLPKNVYTTADLNPGSGQGVRATLGNTSDQPFFSMIGDAFNGAVDQSPLFVANGSDASLERQQGSGWVAVTGVQMVEGVKVVSIQPGKSYELIAQSSGAIAGVYRIVVAYRTSATAEPTRRVTSATFEVR
Ga0207703_109568552	3300026035	Switchgrass Rhizosphere	YTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0207702_106777671	3300026078	Corn Rhizosphere	MKTRILGLLLGGALAACSGNDNAQATDPTNSIAAGQVTITLPKNVYTTTDLNPASGQGVRATLGNTADQPFYSMLGDAFNGAIEQNPLFVANGSDASLEREQGSDWVPVTGVQMIEGVKVVSLQPGKSYELIAHSSGATAGRYRIVVAYRNSATADPTRRVVSGIFEVR
Ga0207683_114078492	3300026121	Miscanthus Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPNSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNAQN
Ga0207698_109896272	3300026142	Corn Rhizosphere	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVV
Ga0207503_10113452	3300026861	Soil	DPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0207516_10061991	3300026905	Soil	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRR
Ga0207428_101534721	3300027907	Populus Rhizosphere	MHSWASMTNRIALLVVGLAVACSGYDDSQATDPTNSIAAGQLTITLPKNIYTATDLNPASGQGVRATLGNSADQTFYSMLGDAFNGAIDQNPLYVANGSDASLEREQGSGWVAVSGVQMIEGVKVVSIQPGKSYELIAHSSGATAGRYRIVVNYRNSVSAEPARRTTSATFEVR
Ga0268264_115808632	3300028381	Switchgrass Rhizosphere	PTNSIAAGVITIALPKNIYTTTELNPSSGQGIRATLGNTSDQPFYSMLGDAFNGALDQNPLFVANGSDASLERQQGSDWVAVSGVQMIEGVKVVSIKPGQSYELIAHSSGATAGNYRIVVAYRNSAAAEPTRRAVSATFEVR
Ga0268240_102043871	3300030496	Soil	NEGIAAGQITIALSKTSYTVNDLKPGSGEGVRATLGNSADQPFYSMIGDAFNGAAEQTPLYVANGSDASLERQQGSDWIPVSGMQMVEGVKVVTLKPGKSYELIAMTSAATAGSYRIVVSYRDAPTAQPTRRTTSAVFEVR
Ga0310813_102101872	3300031716	Soil	MKSRIFALVLGVALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSRGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR
Ga0310812_104181681	3300032421	Soil	VALAACSDSDHLMADPPSSIAAGQLTIALPKTIYTVAELNPASGQGIRATLGNSADQTFYSMLGDAFNGAIDQNPLFVANGSDASLEREQGSDWVAVSGVQMIEGVKVVSIQPGKSYDLIAHSSGATAGRYRIVVAYRNTQNAEPTRRVTSAIFEVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087376

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences