Metagenome Family F084582

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084582
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	50 residues
Representative Sequence	MTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPL
Number of Associated Samples	98
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.80 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.893 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.67% Coil/Unstructured: 81.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04228	Zn_peptidase	23.21
PF13286	HD_assoc	10.71
PF01381	HTH_3	4.46
PF00924	MS_channel	4.46
PF00848	Ring_hydroxyl_A	1.79
PF14559	TPR_19	1.79
PF08447	PAS_3	1.79
PF09976	TPR_21	0.89
PF00535	Glycos_transf_2	0.89
PF12844	HTH_19	0.89
PF13432	TPR_16	0.89
PF13174	TPR_6	0.89
PF01738	DLH	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2321	Predicted metalloprotease	General function prediction only [R]	23.21
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	4.46
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	4.46
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	3.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	36.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.54 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36.61 %
Unclassified	root	N/A	18.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.93 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	36.61 %
Unclassified	root	N/A	18.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.61 %
Unclassified	root	N/A	18.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10082927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300001867\|JGI12627J18819_10210981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300002917\|JGI25616J43925_10154153	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300004091\|Ga0062387_100359736	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300004152\|Ga0062386_101256932	Not Available	616	Open in IMG/M
3300005439\|Ga0070711_100893846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300006052\|Ga0075029_101209964	Not Available	528	Open in IMG/M
3300006174\|Ga0075014_100138176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300007265\|Ga0099794_10668265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300009523\|Ga0116221_1158927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300009629\|Ga0116119_1162507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300009698\|Ga0116216_10785002	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300009764\|Ga0116134_1021764	All Organisms → cellular organisms → Bacteria → Acidobacteria	2608	Open in IMG/M
3300010048\|Ga0126373_12412232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300010048\|Ga0126373_13088157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300010048\|Ga0126373_13150697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300010341\|Ga0074045_10704233	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300010360\|Ga0126372_10557310	Not Available	1090	Open in IMG/M
3300010361\|Ga0126378_12499413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300010376\|Ga0126381_102512379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300010376\|Ga0126381_104766343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300011120\|Ga0150983_11222282	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300012359\|Ga0137385_10035801	All Organisms → cellular organisms → Bacteria	4452	Open in IMG/M
3300012361\|Ga0137360_11637922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012683\|Ga0137398_10016356	All Organisms → cellular organisms → Bacteria	3918	Open in IMG/M
3300012917\|Ga0137395_10990350	Not Available	603	Open in IMG/M
3300012924\|Ga0137413_11219970	Not Available	600	Open in IMG/M
3300014151\|Ga0181539_1231955	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300014151\|Ga0181539_1306146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300014151\|Ga0181539_1381513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300014153\|Ga0181527_1112026	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300014168\|Ga0181534_10392856	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300016270\|Ga0182036_11134735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300016270\|Ga0182036_11881181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300016341\|Ga0182035_12188613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300016341\|Ga0182035_12198411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300016357\|Ga0182032_10665488	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300016387\|Ga0182040_10224431	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300016387\|Ga0182040_11351529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300016422\|Ga0182039_10340206	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300016445\|Ga0182038_10886822	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300017822\|Ga0187802_10227910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300017944\|Ga0187786_10009163	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300017955\|Ga0187817_10589998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300017973\|Ga0187780_11158449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300017975\|Ga0187782_10002249	All Organisms → cellular organisms → Bacteria	14178	Open in IMG/M
3300017998\|Ga0187870_1019197	All Organisms → cellular organisms → Bacteria	3465	Open in IMG/M
3300018057\|Ga0187858_10956762	Not Available	502	Open in IMG/M
3300018088\|Ga0187771_10137446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1999	Open in IMG/M
3300020140\|Ga0179590_1231189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300020150\|Ga0187768_1146330	Not Available	544	Open in IMG/M
3300020580\|Ga0210403_10185702	All Organisms → cellular organisms → Bacteria → Acidobacteria	1704	Open in IMG/M
3300020581\|Ga0210399_10489246	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300020581\|Ga0210399_11388470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300021170\|Ga0210400_11399003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300021180\|Ga0210396_10346042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300021403\|Ga0210397_10843695	Not Available	708	Open in IMG/M
3300021406\|Ga0210386_11822115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300021420\|Ga0210394_10176713	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300021474\|Ga0210390_11070134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300021560\|Ga0126371_12034597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300021560\|Ga0126371_13397199	Not Available	538	Open in IMG/M
3300021560\|Ga0126371_13894743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300024246\|Ga0247680_1023595	Not Available	889	Open in IMG/M
3300025929\|Ga0207664_10778528	Not Available	861	Open in IMG/M
3300026281\|Ga0209863_10074502	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300026334\|Ga0209377_1306825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300026374\|Ga0257146_1074776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300026467\|Ga0257154_1081361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300026551\|Ga0209648_10144215	All Organisms → cellular organisms → Bacteria → Acidobacteria	1890	Open in IMG/M
3300026890\|Ga0207781_1030171	Not Available	524	Open in IMG/M
3300026979\|Ga0207817_1026049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300027663\|Ga0208990_1011430	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300027812\|Ga0209656_10185460	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300027867\|Ga0209167_10571194	Not Available	619	Open in IMG/M
3300028047\|Ga0209526_10658298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300030706\|Ga0310039_10239703	Not Available	702	Open in IMG/M
3300031231\|Ga0170824_128699412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300031474\|Ga0170818_101784041	Not Available	504	Open in IMG/M
3300031719\|Ga0306917_11038210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031736\|Ga0318501_10520535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300031744\|Ga0306918_11519789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300031768\|Ga0318509_10157802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300031795\|Ga0318557_10606826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300031833\|Ga0310917_10076856	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300031880\|Ga0318544_10016620	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300031897\|Ga0318520_11084526	Not Available	507	Open in IMG/M
3300031910\|Ga0306923_10361920	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300031942\|Ga0310916_10808496	Not Available	789	Open in IMG/M
3300031945\|Ga0310913_10140067	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300031945\|Ga0310913_10912879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300031962\|Ga0307479_11014835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300032001\|Ga0306922_10736063	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300032010\|Ga0318569_10242429	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032039\|Ga0318559_10169340	Not Available	997	Open in IMG/M
3300032041\|Ga0318549_10193213	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300032054\|Ga0318570_10269725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300032059\|Ga0318533_10644268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300032067\|Ga0318524_10346446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300032160\|Ga0311301_11254139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	943	Open in IMG/M
3300032180\|Ga0307471_100300266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1692	Open in IMG/M
3300032954\|Ga0335083_10956329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300033134\|Ga0335073_10859851	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300033289\|Ga0310914_10291630	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300033289\|Ga0310914_11358706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300033405\|Ga0326727_10651498	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300033983\|Ga0371488_0202343	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300034070\|Ga0334822_061123	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300034091\|Ga0326724_0280220	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	14.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.14%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Peat	Environmental → Terrestrial → Peat	3.57%
Sediment	Environmental → Aquatic → Sediment	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.93%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100829272	3300001545	Forest Soil	MNVKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMIP
JGI12627J18819_102109812	3300001867	Forest Soil	MSPFTAKSERRKKPRNRPPSLVYVELPSGNGGMMRDLSEEGFAVRAMIPLRAEGNTYFAF
JGI25616J43925_101541533	3300002917	Grasslands Soil	MTSKTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMLPLRQSEKVP
Ga0062387_1003597361	3300004091	Bog Forest Soil	MTVQTERRTSLRKRPLSLVYVELGASNGGMMKDLGEEGFALRAMMPLAPDANTVFC
Ga0062386_1012569321	3300004152	Bog Forest Soil	MQAFAPSMTVNTERRKKLRNRPDSLVNVELEFGNSGMLRDLSEVGFALRAA
Ga0070711_1008938462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTLDTERRKESRKRPPSLVYVELASANGGMMRDICEEGFAVRAMMPL
Ga0066903_1018557021	3300005764	Tropical Forest Soil	MHSSESTMTVDAERRKKLRKKPASLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQTSF
Ga0075029_1012099641	3300006052	Watersheds	MTVQSERRTQHRKRPLSLVYVELPPANGGMMRDLSDR
Ga0075014_1001381762	3300006174	Watersheds	MTTRTERRTQSRKRPLTLVYVELPPSNGGMMRDLSEQGFALRAMMPLKQSEKVPFSF
Ga0099794_106682651	3300007265	Vadose Zone Soil	MALKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEQGFSLRAMMPLRPSEK
Ga0116221_11589272	3300009523	Peatlands Soil	MTANTERRKKHRKQPRSLLYVELEYGNGGMMRDLSEEGFA
Ga0116119_11625071	3300009629	Peatland	MTVDTERRKKHRNRPRSLVYVELESANGGMMRDLSEEGFALRAMM
Ga0116216_107850022	3300009698	Peatlands Soil	MQAFAPSMTFNIERRKKRRNSPQSLLYVELEWENGGMMRDLSEEGFAVRA
Ga0116134_10217643	3300009764	Peatland	MQAFVPAMTVDTERRKKLRNRPRSLVYVELESGNGGMMRDLSEEGFALRAMMPLR
Ga0126373_124122321	3300010048	Tropical Forest Soil	MTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPL
Ga0126373_130881571	3300010048	Tropical Forest Soil	MTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQTSFVF
Ga0126373_131506971	3300010048	Tropical Forest Soil	MTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQTSF
Ga0074045_107042332	3300010341	Bog Forest Soil	MQAFTPAMTVNTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMM
Ga0074045_107429491	3300010341	Bog Forest Soil	MQAFAPSMTVDTERRKKLRNRPRQLVYVELESANGGMMRDLSEEGFALRAMMPLRAGEKTQFA
Ga0126372_105573102	3300010360	Tropical Forest Soil	MTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRAGEQTSFAFS
Ga0126378_124994131	3300010361	Tropical Forest Soil	MTVDAERRKKLRKKPASLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQTSFVF
Ga0126381_1025123792	3300010376	Tropical Forest Soil	MTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQ
Ga0126381_1047663431	3300010376	Tropical Forest Soil	MTADGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQTSFVF
Ga0150983_112222823	3300011120	Forest Soil	MTLKTERRSQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMMPLR
Ga0137385_100358011	3300012359	Vadose Zone Soil	MPLKTERRTQHRKRPLSLVYIELPPSNGGMMRDLSEQGFSLRAMM
Ga0137360_116379221	3300012361	Vadose Zone Soil	MTLKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEYGFSLRAMMPLQP
Ga0137398_100163561	3300012683	Vadose Zone Soil	MTLKTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRA
Ga0137395_109903501	3300012917	Vadose Zone Soil	MTLTTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEQGFSLRAM
Ga0137413_112199702	3300012924	Vadose Zone Soil	MTSKTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSL
Ga0181539_12319552	3300014151	Bog	MQAFTPAMTVNTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQAG
Ga0181539_13061462	3300014151	Bog	MTVNTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQAGGKT
Ga0181539_13815131	3300014151	Bog	MTANTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQAG
Ga0181527_11120261	3300014153	Bog	MQAFTPAMTVNTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMMP
Ga0181534_103928561	3300014168	Bog	MTDSTVTTERRKEERKRPLGLIYVELSSANGGMLRDLSESGFAMRAMMP
Ga0182036_111347351	3300016270	Soil	MDPSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRA
Ga0182036_118811812	3300016270	Soil	MSLTPVNERRNKLRKRPLRLVYVELVSGNGGMMRDLSEEGFAVRAMMPLRQGEK
Ga0182035_121886131	3300016341	Soil	MHSSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPL
Ga0182035_121984111	3300016341	Soil	MHSSESTMTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAG
Ga0182032_106654882	3300016357	Soil	MHRSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRA
Ga0182040_102244311	3300016387	Soil	MHSSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRAGEQT
Ga0182040_113515292	3300016387	Soil	MHRSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRAGEQT
Ga0182037_100963371	3300016404	Soil	MTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRAGEQTSFAFSLD
Ga0182039_103402062	3300016422	Soil	MHRSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMI
Ga0182038_108868221	3300016445	Soil	MHLSESTMTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRA
Ga0187802_102279102	3300017822	Freshwater Sediment	MSAKTANGERRKKSRKSPPSLLYVELGPGNGGMIRDLSEEGFALRAMIPLHP
Ga0187786_100091631	3300017944	Tropical Peatland	MPSTPVTTERRKKLRKKPLRLVYVELALGNGGMMRDLSEEGFAV
Ga0187817_105899981	3300017955	Freshwater Sediment	MSPQAANSERRKKTRKSPPSLVYVELGAGNGGMMRDLSEEGFALRVM
Ga0187780_111584492	3300017973	Tropical Peatland	MTVDTERRKKIRNRPRSLVYVELESANGGMMRDLSEEGFAMRAVMPLRTGEKT
Ga0187782_1000224917	3300017975	Tropical Peatland	MSPSRSERRRKSRKRPLSLVYVELASGNGGMMRDLSDEGFAVRAMMPL
Ga0187870_10191971	3300017998	Peatland	MQAFVPAMTVDTERRKKLRNRPRSLVYVELESGNGGMMRDLSEEGFA
Ga0187858_109567621	3300018057	Peatland	MTIKTERRKKVRNRPRSLVYVELESANGGMMRDLSEEG
Ga0187771_101374461	3300018088	Tropical Peatland	MSVNTERRKKLRNRPRSLVYVELESANGGMMRDLSEEGFALRAMMPLRAG
Ga0179590_12311891	3300020140	Vadose Zone Soil	MTSKTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMLPLRQS
Ga0187768_11463302	3300020150	Tropical Peatland	MSPKAGNGERRKRPRKDPPSLVYVELGPSNGGMLRNLSEEGFALRAMM
Ga0210403_101857021	3300020580	Soil	MTLKTDRRMQHRKRPLSLVYVELPPANGGMMRDLSEQGFSLRAMMPVSPSERIPFS
Ga0210399_104892463	3300020581	Soil	MTVKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRA
Ga0210399_113884701	3300020581	Soil	MTVETDRRGKFRKRPSTLVYVELASGNGGMMRDLCEEGFALRAMMPLRPGETTTFNFSL
Ga0210400_113990031	3300021170	Soil	MTLDTERRKESRKRPPSLVYVELASDNGGMMRDICEEGFAVRAMMPL
Ga0210396_103460422	3300021180	Soil	MTLKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMIPLGPS
Ga0210397_108436951	3300021403	Soil	MTVETDRRGKFRKRPSTLVYVELASGNGGMMRDLCE
Ga0210386_118221151	3300021406	Soil	MTLKTERRTQDRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAM
Ga0210394_101767131	3300021420	Soil	MTLKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMMPLRPSEKIP
Ga0210390_110701342	3300021474	Soil	MTMKTERRTQHRKRPLSLVYVELPPANGGMMRDLSEQGFSLRAMLPV
Ga0126371_120345971	3300021560	Tropical Forest Soil	MHLSESTMTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQT
Ga0126371_133971991	3300021560	Tropical Forest Soil	MHPSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLS
Ga0126371_138947431	3300021560	Tropical Forest Soil	MTLDTERRKESRKRPPSLVYVELASANGGMMRDIC
Ga0247680_10235951	3300024246	Soil	MTLKTERRTQLRKRPLSLVYVELPPANGGMMRDLSEQG
Ga0207664_107785282	3300025929	Agricultural Soil	MTLDTERRKESRKRPPSLVYVELASANGGMMRDICEEGF
Ga0209863_100745021	3300026281	Prmafrost Soil	MHSNMPRATIASNRRQEQRTRPLSLIYVELSSTNGGMMRDLSEKGFAMRAMMPLRV
Ga0209377_13068251	3300026334	Soil	MTLKTERRTQLRKRPLSLVYVELPPANGGMMRDLSEQGFSLRAMLPLRPSEKIP
Ga0257146_10747762	3300026374	Soil	MTLKTDRRTQHRKRPLSLVYVELPPANGGMMRDLSEQGFSLRAMTPVSPSEKIQYSF
Ga0257154_10813612	3300026467	Soil	MTLKTERRTRLRKRPLSLVYVELPPSNGGMMRDLSEQGFSLRAMMPLQPSEKIPFS
Ga0209648_101442151	3300026551	Grasslands Soil	MTLDTERRKESRKRPPSLVYVELASANGGMMRDICEEGFAVRVMV
Ga0207781_10301711	3300026890	Tropical Forest Soil	MHPSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGF
Ga0207817_10260492	3300026979	Tropical Forest Soil	MQAFAMSLTPVNERRNKLRKRPLRLVYVELVSGNGGMMRDLSEEGFAVRAMMPLR
Ga0208990_10114301	3300027663	Forest Soil	MTLKTNRRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGF
Ga0209656_101854602	3300027812	Bog Forest Soil	MTVETDRRAKFRKRPLSLVYVELGTGNGGMMRDLCEEGFALRAMMPLRPGE
Ga0209167_105711942	3300027867	Surface Soil	MTLKTERRTQHRKRPLSLVYVELPPGNGGMMRDLSEQ
Ga0209526_106582982	3300028047	Forest Soil	MNVKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEHGFSLRAMIPLQPSEKIPFSFA
Ga0310039_102397032	3300030706	Peatlands Soil	MQSFPSMTANTERRKKHRKQPRNLLYVELEYANGGMMRDLSEEGFA
Ga0170824_1286994122	3300031231	Forest Soil	MTLKTDRRTQHRKRPLSLVYVELPPANGGMMRDLSEQGFSLRAMLPVS
Ga0170818_1017840411	3300031474	Forest Soil	MSQRTIESERRSDARKRPLSLVYVELTSANGGMLRDLSEV
Ga0306917_110382102	3300031719	Soil	MHLSESTMTVDAERRKKLRKKPLSLVYVELPSANGGMMRDLS
Ga0318501_105205352	3300031736	Soil	MHSSESTMTADGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMI
Ga0306918_115197891	3300031744	Soil	MHRSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIP
Ga0318509_101578021	3300031768	Soil	MTVKTERRIQSRKRPLSLVYVELPPANGGMMRDLSETGFALRAMMPLQQSE
Ga0318557_106068261	3300031795	Soil	MSNLEHGEHRRTPRKRPLSLVYVELAHGNGGMMRDLSIEGFAVRAMMPVLAGENTPFSFS
Ga0310917_100768561	3300031833	Soil	MHRSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSE
Ga0318544_100166203	3300031880	Soil	MHSSESTMTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLR
Ga0318520_110845261	3300031897	Soil	MHSTESAMTVDAERRKKLRKKPLSLVYVELPSSNGGMMRDLS
Ga0306923_103619203	3300031910	Soil	MSVHTDRRTQLRKRPLSLVYVELPPSNGGMLRDLNEYGFSLRAMIP
Ga0310916_108084962	3300031942	Soil	MTLDTERRKESRKRPPSLVYVELASANGGMMRDICEEGFA
Ga0310913_101400673	3300031945	Soil	MHSSESTMTVDAERRKKLRKRPLSLVYVELPSSNGGMMRDLSEEGFAMRAMIPLRAGEQT
Ga0310913_109128792	3300031945	Soil	MQAFAMSLTPVNERRNKLRKRPLRLVYVELVSGNGGMMRDLSEEGFAVRAMMPLRQGEKT
Ga0307479_110148352	3300031962	Hardwood Forest Soil	MPLKTERRTQLRKRPLSLVYVELPPSNGGMMRDLSEEGFSLRAMMPVSPSEKVPF
Ga0306922_107360631	3300032001	Soil	MHSSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFAMRAMIPLRAGEQTSF
Ga0318569_102424292	3300032010	Soil	MHSSESTMTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAM
Ga0318559_101693401	3300032039	Soil	MHSSESTMTVDGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAM
Ga0318549_101932131	3300032041	Soil	MHSSESTMTADGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFA
Ga0318570_102697252	3300032054	Soil	MHSSESTMTADGERRKKLRKKPLSLVYVELPSANGGMMRDLSEDGFAMRAMIPLRG
Ga0318533_106442681	3300032059	Soil	MLAFTASMTVHTERRKKLRNRPPRLVYVELESGNGGMMRDLTEGGFALRAMMPLRAGE
Ga0318524_103464462	3300032067	Soil	MTVKTERRIQSRKRPLSLVYVELPPANGGMMRDLSETGFALRAMMPLQ
Ga0311301_112541391	3300032160	Peatlands Soil	MQVFAPSMTVETERRRKPRNRPRTLVYVELESANGGMMRDLSEDGFALRAMMPLRAGE
Ga0307471_1003002662	3300032180	Hardwood Forest Soil	MTLDTERRKESRKRPPSLVYVELASANGGMMRDICEEGFAVRAMMPLRI
Ga0335083_109563291	3300032954	Soil	MTPSTVNSERRRNTRKRPPTLIYVELSATNGGMMRDISEEGFALRAMMPLVSGQR
Ga0335073_108598512	3300033134	Soil	MTGRIERRTQSRKRPVSLVYVELPPANGGMMRDLS
Ga0310914_102916303	3300033289	Soil	MDPSESTMTVDAERRKKLRKRPLSLVYVELPSANGGMMRDLSEEGFA
Ga0310914_113587061	3300033289	Soil	MHSSEFTMTVDAERRKKLRKKPASLVYVELPSANGGMMRDLSEDGFAMRAMIPLRAGQQ
Ga0326727_106514981	3300033405	Peat Soil	MQAFTPAMTANTERRKKLRSRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQAGGKT
Ga0371488_0202343_821_997	3300033983	Peat Soil	MQAFTPAMTVNTERRKKLRNRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQAGGK
Ga0334822_061123_1_174	3300034070	Soil	MQAFVPAMTVDTERRKKLRNRPRSLVYVELESGNGGMMRDLSEEGFALRAMMPLRAGG
Ga0326724_0280220_795_938	3300034091	Peat Soil	MTANTERRKKLRSRPRSLVYIELESANGGMMRDLSEEGFALRAMMPLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084582

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences