Metagenome Family F083478

Basic Information
Family ID	F083478
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQ
Number of Associated Samples	2
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (99.107 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.19% β-sheet: 0.00% Coil/Unstructured: 93.81%
Feature Viewer

Powered by Feature Viewer

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03078	ATHILA	4.46
PF13650	Asp_protease_2	0.89

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

Powered by ApexCharts

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	99.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	99.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	99.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	99.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100160332	3300014486	Root	MFKKVKNAGKVLKNKGTRSSSLHSSEMSVDPTPPQAPSSSSDPQVTVLLKTGDLGLKIRREKEVYQQLKNKDYIHTPTLYPILL*
Ga0182004_100184633	3300014486	Root	VSTFVGRMMKKVKNAGKALKNISTRSSSRHPSHQSEMNVDPTPPQAPSSSSDPRNKVLLKTGDLGLKTRREKEVFQQLKN*
Ga0182004_100210353	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSSHPSEMSIDPTPTQALSYSSNPQVKVLLKIGDLGLKTRREKEVYQ*
Ga0182004_100272633	3300014486	Root	MFKKVKNASKAFKNIGTRSSSRHSSHQSEMSIDPMPPQAPSSSCDPKVKVLLKTGDLGLKTPREKEVYQ*
Ga0182004_100277463	3300014486	Root	MFNKVKNAGKVLKNIGTRSSSRHSSHQSKMSVKPTPPQAPSSSSDPQVKVLLKIGDLELKTRREKEVY*
Ga0182004_100281337	3300014486	Root	MFKKVKNVGKTLKSIGTRSSSRHSSHQSEMSVDLTPPQAPSSSSGTRVKVLLKIGDLGLKTRREKIVF*
Ga0182004_100292853	3300014486	Root	LPTFVYRMFKKVKNIGKALKNIGTRSSSRHSSHTSEMSVDPTPTQAPSSSSDQQVKVLLKIGYLGLKTRREKEVYQ*
Ga0182004_100307695	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSSHPSEMSIDPTPTQAPSSSSDPQVKVLLKTGDLGLKTRREKEVLPAAKEQTFHSHPHS*
Ga0182004_100324444	3300014486	Root	MFKNVKNAGKALKNLGIRSSSRHSSNPSEMSVDPTPPQAPQAPSSSSDQQVKVLLKIGVLGLKTRREKEVYQ*
Ga0182004_100341034	3300014486	Root	MLKKVKNAGKTLKNIGTRSSSRHSSEMSVDPTPQQAPSSSSGMRVKVLLKTGDLGLKTCREKEVF*
Ga0182004_100358455	3300014486	Root	MFKKVKNAGKAFKNIGTRSSSRHSSHQSEMSIDPMPPQAPSSSSDPRVKVLLKTGDLGLKTRREKEVY*
Ga0182004_100406624	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSEMSVDPTPPQAPSSSSDPQVKVLLKLGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQETGMDTEFDLIF*
Ga0182004_100455015	3300014486	Root	MMFKKVKNAGKALKNIGTRSSSRHSSHPLELSIDPTTPQAPSSSSDQQVKVLLKIGDLGLKTHREKEVYQQLKNNDLLPPIIGTDCQ*
Ga0182004_100530963	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSSHPSEMSIDPTPTQAPSSSSDPQVKVLLKIGDLGLKTCREKEVY*
Ga0182004_100536541	3300014486	Root	MFKKVKNTGKVLKNIGTRSSSRHSSEMNIDPTPPQAPSSSSDQQVKILLKIGDLGLKTHREKEVY*
Ga0182004_100546083	3300014486	Root	MFKKVKNVGKVLKNIGIRSSSRHSSHQSEMSVDPTPPQAPSSSSDPQVKVLLKTGNLGLKTRREKESLPAAKE*
Ga0182004_100573422	3300014486	Root	MFKKVKNAGKARKNIGTRNSSRHSSHQSEMSIDPTPPQAPSSSSNAQVKVLLKIGDLGLKTHREKEVYQ*
Ga0182004_100577743	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHQSEMSVDPTPLQAPSSSSDPRVKVLLKTGDLGMNTRREKEVF*
Ga0182004_100577831	3300014486	Root	MFKKVKSAGKALKNIGTRSSSRHSSHPSEMSVDPTPPQAPSSSSDPQVKVLLKIGELGLKTRREKGVY*
Ga0182004_100625994	3300014486	Root	MFKKVKNAGMALKNIGTRSSSRHSSHLSEMSVDPTPTQAPSSSSDQQVKVLLKIGDLELKTCREKEVYQ*
Ga0182004_100637102	3300014486	Root	MFKKVKNAGKVKSSSRHSSHQSEMSVDPTPPQAPSSSSDPRVKVLVKTGDLGLKTRREKDVYQ*
Ga0182004_100639212	3300014486	Root	MFKKVKNVGKILKNIGTRSSSRHSSHQSEMSFDPTPPQAPSSSSDPQVKVLLKTGDLGLKTRREKEVY*
Ga0182004_100694901	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSIDPTPTQAPSSSSNQQVKVLLKVGDLGLKTQREKEVH*
Ga0182004_100709074	3300014486	Root	MFKKVKNTGKALRNIGTRCSSRHSSHPSEMSVDPTPTQATSSSSNQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFI
Ga0182004_100767911	3300014486	Root	VSTFAGRMMKKVKSVGKALKNISTRSSSQYSSHQSEMSVDPTPPQAPSCSSDTRVKVLLKTGDLGLKTRWEKEVFQQLKNKD
Ga0182004_100791392	3300014486	Root	MFKKVKNVGKAFKNIGTRSSSRHSSHQSEMSNDPTPPQAPSSSSDQQVKVILKIGDLGLKTRREKEVYQQLKEQTFHSHPHS*
Ga0182004_100807562	3300014486	Root	MFKKVKNAGKVLRNIGTRSSSRHSSHQSEMSIDPTLPQAPSSSSDPQVKALLKIEDLGLKTRREKEVYQ*
Ga0182004_100809321	3300014486	Root	MFKKVKNAGKALKNIGTRSSFRHSSEMSVDPTPLQAPSSSSDQQVKVLLKLGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQETGMDTKFNLIF*
Ga0182004_100809442	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHQSEISVEPTPPQAPSSSSDPRVKVLLKTGDLGLKTHREKEVFQ*
Ga0182004_100814662	3300014486	Root	MFKKVKNVGKALKNIGTRSSSRHSSHPSKMSVDPTPTQAPSSSSNQQVNVLLKIGDLGLK
Ga0182004_100904322	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSHQSEMSVDPTPPQAPSSSSDPRVKVLLKTGDLGLKTRREKQVF*
Ga0182004_100911022	3300014486	Root	MSTFVYRMFKKVKNAGKTLKSIGTRSSFRHSSHQSEMSVDPTPPQAPSSSLGTRVKVLLKTGDLGLKTRREKEVF*
Ga0182004_100919071	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPPQAPSSSSYPQVKVLLKIGDLGLKTVGKRKFTSS*
Ga0182004_100956842	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSPHQSEMSVDPTPPQAPSSSSDPQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPT
Ga0182004_100973652	3300014486	Root	MFKKVKNTGKVLKNIGARSSSQHSSHPSELSIDPTPTQAPSSSSDPQVKVLLKIGDLGLKTHREKEVYQ*
Ga0182004_100986512	3300014486	Root	MMKKVKNAGKALKNISTRSSSRHSSHQSDMSIDPTPPQAPSSSLDTRVKVLLKIEDLGLKTREEKEVYQ*
Ga0182004_101010101	3300014486	Root	MFKKVKNTSKALKNIGTRSSSRLSSHQSEMSVDPTPPQAPSSLSGMRVKVLLKIGDLGLKTRREKEVF*
Ga0182004_101022982	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSLHPSEMNVDPTPTQAPSSSSYQQVKVLLKIGDLELKTRREKEVY*
Ga0182004_101082822	3300014486	Root	MFKKVKNAGKALKNIGTRSSAQHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEV
Ga0182004_101152341	3300014486	Root	MFKKVKNAGKVLRNIGTRSSPRHSSEMSVDPTSPQAPSSSSDPQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPIL
Ga0182004_101170373	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSSSNQQVKVLLKIEDLGLKTRREKEVY
Ga0182004_101172731	3300014486	Root	MFKKVKNVGKALKNIGTRSSARHSSHPLEMSVDATPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPI
Ga0182004_101195871	3300014486	Root	VFLPTFVYRMFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSSSDQQVKVLFKIGDLGLKT*
Ga0182004_101200961	3300014486	Root	MFKKVKNAGKVLRNIGTRCSSRHSSEMSVDPTSPQALSSSSDPQVKVFLNIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQETGMDTEFDLIF*
Ga0182004_101271551	3300014486	Root	MFKKVKNVGKTLKNIGTRSSSRHSSHQSEMSVDPTPPQAPSSSPSPRVKVLLKTGDLGLKTHREKEVFQ*
Ga0182004_101283201	3300014486	Root	MFKKVRNAGMALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSLGQQVKV
Ga0182004_101284082	3300014486	Root	MFKKVKNAGKALKNIGTKSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLK
Ga0182004_101314081	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQALSSSSDQQVKVLLKIGD
Ga0182004_101341071	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSVMSVDPTPTEAPSSSSDQQVKVLLKIGDLGLKTRREKEVY*
Ga0182004_101342552	3300014486	Root	MFKKVKNAGKALKSIGTRSSSRHSSHPSEMSIDPTPTQALPSSSNQQVKVLLKIGDLGLKTRREKEVYQQLKKQRFHSHPYS*
Ga0182004_101352101	3300014486	Root	MFKKVKNAGKALKKIGTRSSSRHSSHQSEMSIDPTPPQAPSSSSDQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTVGYS*
Ga0182004_101376591	3300014486	Root	MFKKVKNVGKALKNIGTRSSSRHSSHPSERSVDPTPTQAPSSSSDQQVKVLLKIGDLGLKTRREKEVY*
Ga0182004_101379122	3300014486	Root	MFKKAKNAWKVLKNIGKRSLSRHSSEMSVDPTSPQAPSSSSDPQVKVLLKIGDLGLKTRKEKEV*
Ga0182004_101396501	3300014486	Root	KKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSLSDHQVKVLFKIGDLGLTT*
Ga0182004_101407551	3300014486	Root	MFKKVKNTGKALKNIGTRSSAQHSSQPSEMSVDPTPIQAPSSSSGQQVKVLLKIGDLGLKTR
Ga0182004_101417881	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQ*
Ga0182004_101458871	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHQSEMSIGPTPLQAPSSSFDPQVKVLLKIGDLGLKTRREKELYQQLKNKDFIHTPTLDPILVQETGMDT
Ga0182004_101468762	3300014486	Root	MFKKVKNAGKALKNISTRISSRHSSHPSEMSVDPTPTQAPSSSSDQQVNVLLKIGDIGLNLQGKGSLPAAKEQRFHSHPYS*
Ga0182004_101478402	3300014486	Root	MFKKVKNAGKVLKNIGTRSSSRHSSHPSEMSVDPTHPQAPSSSFDPQVMVLLKIGDLGLKTHREKEVYQ*
Ga0182004_101485881	3300014486	Root	MFKKVKNARKVLRNIGTRSSSRHSSEMSVNLTSPQAPSSSSDLQVKVLLKIGDLGLKTRRENEVYQQLKNKDFIHTPTLDPILLQETGMDTEFDLIF
Ga0182004_101525361	3300014486	Root	MFKKVKNAGKALKNIGTRSSTRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPTLLQE
Ga0182004_101526132	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSHPSEMSVDQTPTQAPSSSSGQQVKVLLKIGDLGLKARREKEVYQQ*
Ga0182004_101528592	3300014486	Root	MFKKAKNAEKTLKNIGTRSSSQHSSHPSEMSVDPTPAQAPSSSSDQQIKVLLKIGDHGLRTRREMEVY*
Ga0182004_101548122	3300014486	Root	MFKKVKNVSKAFKNIGTRSSSRHSSHQSEMSIDPTPPQAPSSSSDLRVKVLLNIGDLGLKTRREKEVYQ*
Ga0182004_101565361	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSKMSIDPTPPQALSSSYDPQVKVLLKIGDLALKTRREKEVYQ*
Ga0182004_101572081	3300014486	Root	MFKKVKNAGKALKNIGTRSSTRHSSQPSEMSIDPTPTQAPSSLSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPTLLQE
Ga0182004_101634391	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSSSDQQVKVLLKIGDLGLKTRRERKFTSS*
Ga0182004_101647231	3300014486	Root	MFKKVKNAGKALKNIGTRSSPRHSSHQSEMSIDPTPPQAPSSSSDPQVKVLLKIGDLGLKTR
Ga0182004_101662232	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSVQQVKVLLKIGDLGLKTRREKEVY*
Ga0182004_101689101	3300014486	Root	VDITFRVRVKNAGKALKNIGTRSSSRLSSHQSEMSIDPTPPQAPSSLSDTRVKVLLKTGDLGLKTRRDKEVFE*
Ga0182004_101701772	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSIDPTPTQAPSSSSGQQVKVLLKIGDLGLKTLREKEVY*
Ga0182004_101711781	3300014486	Root	MFKKVKNVGKALKNIGIRSSSRHSSQPSEMSIDPTPTQAPSSSSRQHVKVLLKVGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQETGMDTEFDLIF*
Ga0182004_101770731	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVNPTPRQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKN
Ga0182004_101795751	3300014486	Root	MFKKMKNAGKALKNIGTRSSSRHSSHPSEMNVDPTPTQAPSSSSDQQVKVLLKIGDLGLKTHREKEVYQQ
Ga0182004_101824022	3300014486	Root	FVYRMFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSSSNQQVKVLLKIEDLGLKTQREK*
Ga0182004_101827291	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQAPSSSSNQQVKVLLKIGDLG
Ga0182004_101828281	3300014486	Root	MFKKVKNAGKALKNIGTRSSSHHSSHPSEMSVDPTPTQAPSSSSNQQVKVLLKIGDLGLKTRR
Ga0182004_101915301	3300014486	Root	VKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFI
Ga0182004_101998312	3300014486	Root	MFKKVKNAGKALKNIDTRSSSRHSSEMSIDPTPTQALSSSCDQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHT
Ga0182004_102029951	3300014486	Root	MFKKVKNTGKALKNICTRSSSRHSSHPSEMSVDPMPTQAPSSSSGQQVKVLLKIGD
Ga0182004_102030511	3300014486	Root	MFKKVKNAGKVLRNIGTRSSSRHSSHPSEMSIDPTPTQAPSSSSDPQVKVLLKIGDLGLKTRREKEVYQQQKNKDFIHTPTLDPILLQETGMDT
Ga0182004_102085791	3300014486	Root	MFKKVKNAGKALKNIGTRSSTRHSSQPSEMSIDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPT
Ga0182004_102091502	3300014486	Root	MFKKVKNAGKVLKNIGTRSSFRHSSHQSEMSVDPTPPQAPSSSSNPQVKVLLKTRDLGLKTHREKEVYQQLKNRLDYGVIIA*
Ga0182004_102105171	3300014486	Root	VFLPTFVYRMFNKVKNAGKALKNIGTRSSYRHSSHPSEMSVDPTPTQAPSSSSDQQVKVLLKIGDVGLKT*
Ga0182004_102157482	3300014486	Root	MFKKVKNVGKVLKNIGTRSSSRHSSHQSEMSVDPTPPQAPSSSSDPQVKVLLKIGDLGLKTHREKEVYQ*
Ga0182004_102160121	3300014486	Root	MFKKVKNAGKTLKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDL
Ga0182004_102177781	3300014486	Root	VCVSTFVYRMFKKVKNVGKALKNIGTRSSSRHSSHPSEMSVDPTPPQAPSSSSDQQV
Ga0182004_102304851	3300014486	Root	MFKEVKNAGKVLKNIGTRSSSRHSSHPSEMSVDPTPTQALSSSSDQQVKVLLKIGDLGLKTRR
Ga0182004_102368681	3300014486	Root	MFKKVKNAGKAISNIGTRSSTRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKI
Ga0182004_102387871	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKV
Ga0182004_102491191	3300014486	Root	MFKKVKNAGKALKNIGTRSSSQHSSHPSEMSVDATPTQVPSSSSDQQVNVLLKIGDLGLKTRREKEVY*
Ga0182004_102576582	3300014486	Root	MFKKVKNAGKALKNIGTRSSTRHSSQPSEMSIDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQ
Ga0182004_102581522	3300014486	Root	RMFKKVKNAGKALKNIGTRSSSRHSSHPSEMSVDPTPTQALSYSSGQQVKVLLKIGDLGLKT*
Ga0182004_102585921	3300014486	Root	MFKKVKNAGMALKNIGTRSSTRHSSQPSEMSVDPTPTQAP*SSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPT
Ga0182004_102614091	3300014486	Root	MFKKVKNAGKTLKNIGTRSSARHSSHPSEMSVDPTPTQAPSSSSAQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPI
Ga0182004_102652491	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTR
Ga0182004_102653831	3300014486	Root	MFKKVKNAGKALKNIVIRSSSRHSSQPSEMSVDPTPTQAPSSSSGQHVKVLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQ
Ga0182004_102661831	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSHPSEMRVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLK
Ga0182004_102729181	3300014486	Root	MFKKVKNTGKALKNIGTRSSSRYSSHPSEMSVDPTPTQAPSSSSNQQVKVLLKIGDLGLKTRR
Ga0182004_102775012	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLK
Ga0182004_102831412	3300014486	Root	MFKKVKNAGKAIKNIGTRSSSRHSSPPSEMSIDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQL
Ga0182004_102849541	3300014486	Root	MFKKVKNAGKALKNIGTGSSSRHSSHPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREK
Ga0182004_102857741	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSNQQVKLLLKIGDLGLKTRREKEVYQQLKNKDFIHTPTLDPILLQET
Ga0182004_102857872	3300014486	Root	MFKKVKNGGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGL
Ga0182004_102879952	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDL
Ga0182004_102885291	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIEDLGLKTRRE
Ga0182004_102911781	3300014486	Root	MFKKVKNGGKALKNIGTRSSARHSSQPSEMSVDPTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNKDFIH
Ga0182004_102942942	3300014486	Root	MFKKVKNAGKALKNIGTRSSAQHSSQPLEMSVDLTPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQQLKNK
Ga0182004_102974982	3300014486	Root	MFKKVKNAGKALKNIGPRSSSRHSSLPSEMSVDPIPTQAPSSSSGQQVKVLLKIGDLGLKTRREKEVYQ*
Ga0182004_103013891	3300014486	Root	MFKKVKNAGKALKNIGTRSSARHSSQPSEMSVDQTPTQAPSSSSGQQVKVLLKIG
Ga0182004_103014442	3300014486	Root	MFKKVKNAGKALKNIGTRSSSRHSSEMSVDPTPPQAPSSSSDQQVKVLLKIGDLGL
Ga0182005_12032951	3300015265	Rhizosphere	MLKKVKNAGKTLKNIGTRSSTRHSSEMSVDPTPQQAPSSSSGMRVKVLLKTGDLGLKTC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083478

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences