Metagenome Family F083477

Basic Information
Family ID	F083477
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	64 residues
Representative Sequence	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSL
Number of Associated Samples	2
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.89 %
% of genes from short scaffolds (< 2000 bps)	0.89 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (99.107 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300014486\|Ga0182004_10108189	Not Available	1188	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	99.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	99.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	99.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	99.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100289834	3300014486	Root	MFVSFIHVNARTKEKLIKVKVKYLKMLPYLKSDGTVSPCGSFPFLEVVHGVCGTLHGKSLVSYGFLV*
Ga0182004_100448194	3300014486	Root	MFVSFIHVNARTKEKLIEVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYAF
Ga0182004_100521143	3300014486	Root	MFVSFIHVYARTKEKLIKVIVKYLMVLPYLMSDGIVSPCGSFPFLVVVHRVCDTLHRSSLYDE*
Ga0182004_100598755	3300014486	Root	MFVSFIHVNARTEKLIKVIVKYLNMLLYLKSDGAVSPCGSIPFLAVVHRVCGTFHGSSLVSYVFIV*
Ga0182004_100599861	3300014486	Root	MFVSLFYVYARTKEKLMKVIVAYLKMLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHRSSLVMNEPCLPCVNR*
Ga0182004_100608281	3300014486	Root	MFVSFIHMNARTKEKLIEVIVKYLKMLPYLKNDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYAFLVYIVKLHASLSLSLM*
Ga0182004_100636154	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSVPFLAVMHRVSGTLHGTSLVSYSFLV*
Ga0182004_100636461	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLESDGTVSPCGRFPFLAVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_100644751	3300014486	Root	MSFIHLNARTKEKLIEVIVKYLKMLPYLKSDGIVSPCESFPFLAVVHRVCSTLHGSSLMS
Ga0182004_100672501	3300014486	Root	MFVSFIRVNARTKEKLIEVIVKYLKMLPYLKSDGTVSPYGSFPFLAVVHRF
Ga0182004_100673971	3300014486	Root	MNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVYRVCGTLYGSSLMSYVF
Ga0182004_100691351	3300014486	Root	VNARTKEKLIKVIVTYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLMS
Ga0182004_100703031	3300014486	Root	MFVSFIYVNARTKEKLIKVIDKYLNMLPSLKSDGIVSPCGSFPFLAVVHHVCGTLHRSSLVSYAFLV*
Ga0182004_100745761	3300014486	Root	MFVSLFYVNAKTKEKLIKAIVKYLKMLPYLKSDGIVSPCGSFPFLAVVQRVCGTLHGSSLYDE*
Ga0182004_100778611	3300014486	Root	MFVSFIHVNVRTKEKLIKAIDKYLKMLPYLKSDDIVSPCGSFPFLAIVHRVCGTLHASSLICYVFLV*
Ga0182004_100779092	3300014486	Root	CKSYMFVSFIHVNARTKDKLIKVIVKYLKMLPYLKSDGAVSSYGSFPFLAVVHRVCGSLHGSSLVSYAFIV*
Ga0182004_100874011	3300014486	Root	MNAKTKEKLIKVIVKYLNVLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLMSYVFL
Ga0182004_100904161	3300014486	Root	VNARTMEKLIKVIVKYRKMLPYLKSDGTISPCGSFPFLAVVHRVCGTLHGSSLMSYV
Ga0182004_100926791	3300014486	Root	MNARTKEKLIKGIVKYLKMLPYLKSDGTVSPYGSFSFLAVVHRVCGTLHGSSLMSYIFLM
Ga0182004_100953492	3300014486	Root	MFVSFNHVNARTKEKLIKVMVKYLKMLPYLKNDGTVSPCGSFPFLAVMHRVCGTLHGSSL
Ga0182004_100984521	3300014486	Root	MFVSFIHVNARTKEKLIKAIIKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVGGTLHASSLMSYVFLV*
Ga0182004_100997731	3300014486	Root	MFVSFIHVYARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLMS
Ga0182004_101053421	3300014486	Root	MFVSFIHVNARTKEKLMKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_101068291	3300014486	Root	MLNRLGWLIWSCKSYMFVSFIHVNARNKEKLIEVIVKYLKMLPYLKSDGTVLPCGSFPFLTVVHRVCGTLHGSSLMSYAFLA*
Ga0182004_101081891	3300014486	Root	YMFVSFIHVNAITKEKLIEVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCSTLHASSLVSYAFLV*
Ga0182004_101103231	3300014486	Root	KEKLIKVIVKYFKMLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHGSSLVIYAFLV*
Ga0182004_101117081	3300014486	Root	MFVSFIHVNARTKEKLIKVKVKYLKMLPYLKSDGTVSPCGSFPFLAVVHHVCGTLHRSSLMS
Ga0182004_101123231	3300014486	Root	MFVSFIHVNAITKEKLIEVIVKYLKMLPYLKNDGTVSPCGSFPFLAVVHRVCSTLHGSSLVSYAFLV*
Ga0182004_101149332	3300014486	Root	MFVSFIHVNAKNKEKLIEVIVKYLKMLPFLKSDGTLSPCGSFPFLAVVHRVCGTLHGSSLVSYALLV*
Ga0182004_101162601	3300014486	Root	MFVSFIHVNARTKEKLIEVIIEYLKMLPYLKSDGTVSPCGSFPFLAVVHHVCGTLHRLSLVS
Ga0182004_101184802	3300014486	Root	VEGLNILNRLGWLIWSCKSYMFVSFIHVNARNKEKLIEVIVKYLKILPHLKSVGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYVFLVSIVKLHVSLSLSPM*
Ga0182004_101186821	3300014486	Root	MKVILIWSYKSYMFVSFIHVYARTKEKLIKVIVKYLKVLPYLKSDGIVSPCGSFPFLAVVHRV
Ga0182004_101194631	3300014486	Root	MNARTKEKLIKVIVKNLKMLPYLKSDGTVSPYGSFPFLADVHRVRGTLHGSSLMSNVFLV
Ga0182004_101211881	3300014486	Root	MFVSLFYVNARSKEKLIKVIVKYLKMLPYLKSDGTILPCGSFPFIAIVHRVCGTLYLVPWIISL*
Ga0182004_101261611	3300014486	Root	VNARTKEKLIKVIVKCLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLMSY
Ga0182004_101311261	3300014486	Root	MFVSFIHVNAINKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPLLAVVHRV
Ga0182004_101323671	3300014486	Root	MFVSFIYVNAKTKEKLIKVIVKYLKMLPYLKSDGTVSPCGRFPLLAVVHHVCGTSMDHLL
Ga0182004_101334701	3300014486	Root	MFVSLFYVNARTKEKIIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLH
Ga0182004_101349191	3300014486	Root	KSYMFVSFIHMNVRTKDKLIKVIVKYLKMLPYLKSDGTVSLCGSFPFLAVVHRVCGTLHGSSLISYVFLV*
Ga0182004_101429831	3300014486	Root	MFVSFIHVNARIKGSFIKVIVKYFKMLPYLKSDGTVSPCGSFPFLAVVHHVCGTLHRSSLVSYAFLV
Ga0182004_101447341	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVMHRVCCTLHGSSLVSYAFLV*
Ga0182004_101450951	3300014486	Root	MFVSFIHVNARNKEKLIEVIVKYLKMLPYLKNDGTVSPCGSFPLLAVVQRVCGTSMDHLL
Ga0182004_101479722	3300014486	Root	MFVSFIHVYATTKEKLMKVIVAYLKMLPYLKSDGIVSPCESFPFLAVVHLVCGTLHGSSFYDE*
Ga0182004_101481212	3300014486	Root	MFVSFIHVNARNKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVC
Ga0182004_101484761	3300014486	Root	MFVSFIHVNDRAKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVC
Ga0182004_101521171	3300014486	Root	VNARTKEKLIKVIVKYFKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSS
Ga0182004_101586012	3300014486	Root	MNARTKEKLIKVIVKYLKMLPYLKSDGTVSPYGSFPFLAVVHRVCGTLHGSSLMSYVLLVQIVKLHVSLSSSLM*
Ga0182004_101603161	3300014486	Root	MFVSFIYMNARTKEKLIKVIVTYLKMLPFLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLYELCPSCAN
Ga0182004_101630381	3300014486	Root	VNTRTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGT
Ga0182004_101640641	3300014486	Root	VNARTKEKLIKVIVKYLKMLPYLNSDGTVSPFGSFPFLVVVQRVCGTLHGSSL
Ga0182004_101653231	3300014486	Root	MFVSLFYVNARTKEKLIKVIVKYLKVLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHESSLMSYVFLVQIVKLYVSLSSSPM*
Ga0182004_101718541	3300014486	Root	MFVSLSYVNARTKEKLIKAIVKYLKMLPYLKSDGIVSPCESFPFLAVVHRVCGTLHESSLMSYVFLVQLVKLHVSPLSPMSLYLRTS*
Ga0182004_101749391	3300014486	Root	MLASFIHVNVRTKEKLIKVIVKYFQMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYA
Ga0182004_101774821	3300014486	Root	MFVSFIHVNAITKEKLIKVIVKYLKILSYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLMSYVFLV
Ga0182004_101779361	3300014486	Root	MLNQLGWLIWSYKSYMFVYFIHVNAKTKEKLIKVIVKYLKILPYLKSDGIVSPYGSFPFLAVVHRFCGTLHGSSLVSYVFLV*
Ga0182004_101831241	3300014486	Root	VNARTKEKIIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGS
Ga0182004_101857791	3300014486	Root	MFVSFIHVNARTKEKLIEVIVKYLKMLPYLKCDGTVSPCGSFPLLVVVHRVCGTLHGSSLVSYAFLVKIVKLLVSLSLSPM*
Ga0182004_101876632	3300014486	Root	MFVSLFYVYARTKEKLINVIVKYLKVLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHRSSIYDE*
Ga0182004_101918201	3300014486	Root	MFVSFIHVNARTKEKLIELIVKYFKMLPYLKSDGTVTPCGSFPFLAVVHRVCGTLHGSSLVSYA
Ga0182004_101954611	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSL
Ga0182004_101991151	3300014486	Root	NARNKEKLIKVIVKYLKMLPYLKSDDTVSPCGSFPLLVVVHRVCGTLHRSSLVSYAFLV*
Ga0182004_102007611	3300014486	Root	KEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYVFLLQIVNLRASISLSPM*
Ga0182004_102016701	3300014486	Root	LFIHVNARTKEKLIKVIVKYLKMLPYLKSDGIVSPCGSFPLLVVVHRVCGTLHGSSLDDE
Ga0182004_102026271	3300014486	Root	MFVSFIHENARTKEKLIKVIVKYLQMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSYA
Ga0182004_102056501	3300014486	Root	MFVSFIHVNARTKEKLIEVIVKYFKMLPYLKSDGTVSPCGSFPLLAVVHRVCG
Ga0182004_102130641	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYSKSDGTVSPCGNFPFLAVVHRVCGTLHGSSLVSYAFL
Ga0182004_102160541	3300014486	Root	MFVSFIHVNARNKEKLIEVIVKYLKILPYLKSDGTVSPCGSFPFLAVVNRVCGTLHRSSLYDE*
Ga0182004_102181271	3300014486	Root	MNRLGWLIWSYKSYMFVSFIHVNARTKEKLIEVIAKYLKMLPYLKSDGTVSPYGSFPFLAVAHRVCDTLHGSSLVSYVFLV*
Ga0182004_102194112	3300014486	Root	MFVSFIHVNARTKEKLIKVIAKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSL
Ga0182004_102198311	3300014486	Root	KSCKSYMFVSFIYMNARTKEKLIKVIVKYLKMLPYLKSDGVVSPCGSFPFLVVVHRVCGTLYGSSLYDE*
Ga0182004_102209221	3300014486	Root	MFVSFIHVYARTKEKLIKVIVKYLKVVPYLKSDGIVSPCGNFPFLAVVHRVCAVHESSLVSYAFLV*
Ga0182004_102269651	3300014486	Root	MFISFIHMNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRV
Ga0182004_102276951	3300014486	Root	MFVSFIHVNARTKEKLIKVIFKYLKMLPYLKSDGTVSPCGSFPFLAVVHHVCGTLHRSSL
Ga0182004_102278201	3300014486	Root	TKEKLIKVIVKYLKMLPYLKNDGTVSPCGSFPFLAVVHRVCGALHGSSLVSYAFLV*
Ga0182004_102301391	3300014486	Root	MFVSFTHVSARNKEKLIEVIVKYLKILPFLKSDGTVLPYGSFPFFTVVHRVGGTLHGSSLVSYVFLV*
Ga0182004_102341811	3300014486	Root	MFVFFIHVYARTEEKLIKVIVKYLKVLPYLKSDGILSPCGSFPFLAVVHRVCGTFHGSSLYDE*
Ga0182004_102344421	3300014486	Root	VNARTKEKLIKVIVKYLKMLPYLKSDDTVSPCGSFPFLAVVHRVCGILHGSSLVSYAFLV
Ga0182004_102366531	3300014486	Root	MFVSFIHMNAKTMEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTL
Ga0182004_102371271	3300014486	Root	MFVSFIHVNTRTNEKLIKVIVKYFKMLPYLKSDGTVSPCGSFPFLAVVHRVCSTLHGSSLVSYA
Ga0182004_102384851	3300014486	Root	MFVSFTHVNAGNKEKLIEVIVKYLKMLPFLKSDGTVLSYGSFPFFAVVHRVGGTLHGHLL
Ga0182004_102391822	3300014486	Root	MLNQVGWLIWSYKSYVFVSFIHVNARTKEKLIEVIVKYLKMLPYLKSDATVSPCGSFPFLVVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_102457721	3300014486	Root	TKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVYGTLHGSSLVSYAFLV*
Ga0182004_102495532	3300014486	Root	MFVSLFYVNARTKEKLIKVIVRYLKMLPYLKSNGTVSPCGSFPFLAVVHRVCGTLHESSLMSYVFLVQIVKLHVSLSS
Ga0182004_102557472	3300014486	Root	MFVSFTHVNARTKEKLIRVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGS
Ga0182004_102589151	3300014486	Root	WLIWSYKSYMFVSFIHVYARTKEKLIKVIVKYLKVLPYLKSDGIVSPCGSFPFLVVMHRVCGTLHRSSLYDE*
Ga0182004_102594132	3300014486	Root	MFLFIHVDARTKEKLIKMIVKYLKILPYLKSDGTVSPCGSFPLLAVVHRVCGTLHGSS
Ga0182004_102601981	3300014486	Root	IHVNARTKEKFIKVIVKYLKMLPYLKSDSIVLPCGSFPFLVVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_102609731	3300014486	Root	LELQIIHVCLSIYVYARTKEKLIKVIVKYFKMLPYLKSDGIVSPCGSFPFLAVVHRV
Ga0182004_102633901	3300014486	Root	SYMFVSFIHVNTRTKEKLIKVIVKYLKMLPYLKSDGIVSPYGSFPFLAVVHRVCGTLHGSSLMSYVFLV*
Ga0182004_102634061	3300014486	Root	YKSYMFVSLFYVNARTKEKLIKAIVKYLKMLPYLKSDGTISPCGSFPFLAVVPRVCGTLHASSLMSYVFLV*
Ga0182004_102640981	3300014486	Root	MFVSLFYVNARTKEELIKAIVKYLKMLPYLKSDGTVSPCGSSPFLAVVHRVCGTLHGSSLYDE*
Ga0182004_102695391	3300014486	Root	MFVSFIHVNARTKEKLIEEIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSS
Ga0182004_102697871	3300014486	Root	MFVSFIHVNARNKEKLVKVIVKYLKMLPYLKSDGTVSPCGSFPLLAVVHRVCGTLHG
Ga0182004_102717231	3300014486	Root	KEKLIKVIVKYLKMLPYLKSDDTVSPCGSFPFLAVVHRVCDTLHGSSLMSYVFLV*
Ga0182004_102724631	3300014486	Root	CKSYMFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGTVLSPCGSFPFLAVVHHVCGTLHRSSLVSYAFLV*
Ga0182004_102725722	3300014486	Root	MFVSFTHVKARTKEKLIEVIVKYLKMLPYLKSDGTVSPCGSFPLLAVVHRVCG
Ga0182004_102753691	3300014486	Root	MFVSFIHVNARNKEKLIKVIVKYLKILPYLKSDGTISPCGSFPFLAVVNRV
Ga0182004_102757681	3300014486	Root	NARTKEKLIKEIVKYLKMLPCSKSDGTVSSCGSFPFLAVVLRVCDTLHGSSFYGE*
Ga0182004_102861642	3300014486	Root	MFVSFIHVNARTKEKLIEVIVKYLKMLPYLKSDGIVSPCGSFPLIAVVHRVCGTLHGSSLVSYAFLMQIVKLHVSLSLSPM*
Ga0182004_102866311	3300014486	Root	MFVSFIHVNARNKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLVVVHRVCG
Ga0182004_102880681	3300014486	Root	MFVSFIHVNARTKEKLIEVIVKYLEMLPYLKSDGTVSPCGSFPFLVVVHRVCGTLHGSSLVSYAF
Ga0182004_102884201	3300014486	Root	MFVSFIHVYARTKEKLIKAIVKYLKVLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHGSS
Ga0182004_102908451	3300014486	Root	SCKSYMFVSFIHVNTRTKEKLIEVIVKYLKMLPYLKSDGTESPYGSFPFLAVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_102928022	3300014486	Root	MFVSFIHVNARTKEKLIKVIVKYLKMLPYLKSDGIVSPCGSFPFLAVVHRVCGTLHG
Ga0182004_102931902	3300014486	Root	MFVSFILVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRVCGTLHGSSLVSY
Ga0182004_102936562	3300014486	Root	YVNARTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLADVHRVCGTLHGSSLYHE*
Ga0182004_102953031	3300014486	Root	MFVSFIHVNARTKEKLIKVIDKYFKILPYLKSDGRVSPYGSFPLLAVVHRVCGTLHGSSLVSYAFLV*
Ga0182004_102973041	3300014486	Root	MFVSFIHVNGRTKEKLIKVIVKYLKMLPYLKSDGTVSPCGSFPFLAVVHRV
Ga0182004_102988621	3300014486	Root	CKSYMFVSFILVNARTKEKLIEVIVKYLKMLPYLKSDGIVSTCGSFPLLVVVHRVCGTLHGSSLVSYTFLV*
Ga0182004_103004461	3300014486	Root	MFVSFIHVNARTKENLIELIVKYFKMLPYLKSDGTVSPCGSFPLLAVVHCVCGTLHGSS
Ga0182004_103011532	3300014486	Root	VNARTKEKLIKAIVKYLKVLLYLKSDGIVSPCGSFPFLAVVHRVCGTLHRSSLLSYVFLVQIVKLHVSLSSSPM*
Ga0182005_12372571	3300015265	Rhizosphere	MFVSFIRVNPRTKEKLIEVIFKYVKMLPYLKSDGIVSPCESFPLLAVVHRVCSTLHGSSLVSYA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083477

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences