Metagenome / Metatranscriptome Family F069130

Basic Information
Family ID	F069130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	41 residues
Representative Sequence	PIAPGLAISETQFAELIDTCRHLDRHDRAAEKLIGLTIPS
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.82 %
% of genes near scaffold ends (potentially truncated)	97.58 %
% of genes from short scaffolds (< 2000 bps)	88.71 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (70.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.645 % of family members)
Environment Ontology (ENVO)	Unclassified (37.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.839 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.18% β-sheet: 2.94% Coil/Unstructured: 55.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF13432	TPR_16	17.74
PF00501	AMP-binding	5.65
PF01436	NHL	4.03
PF00903	Glyoxalase	4.03
PF00274	Glycolytic	4.03
PF03060	NMO	3.23
PF06983	3-dmu-9_3-mt	2.42
PF00296	Bac_luciferase	2.42
PF02604	PhdYeFM_antitox	1.61
PF01042	Ribonuc_L-PSP	1.61
PF02776	TPP_enzyme_N	1.61
PF08240	ADH_N	1.61
PF13365	Trypsin_2	1.61
PF00497	SBP_bac_3	0.81
PF13410	GST_C_2	0.81
PF00702	Hydrolase	0.81
PF12695	Abhydrolase_5	0.81
PF00211	Guanylate_cyc	0.81
PF02668	TauD	0.81
PF09837	DUF2064	0.81
PF02798	GST_N	0.81
PF00144	Beta-lactamase	0.81
PF13181	TPR_8	0.81
PF04828	GFA	0.81
PF02452	PemK_toxin	0.81
PF13533	Biotin_lipoyl_2	0.81
PF01799	Fer2_2	0.81
PF13424	TPR_12	0.81
PF13417	GST_N_3	0.81
PF03972	MmgE_PrpD	0.81
PF01515	PTA_PTB	0.81
PF13193	AMP-binding_C	0.81
PF02653	BPD_transp_2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	4.03
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	3.23
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	3.23
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.42
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	2.42
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	2.42
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.61
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.61
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.61
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.81
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.81
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.81
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.58 %
Unclassified	root	N/A	29.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.35 %
Unclassified	root	N/A	29.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.42 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.61 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.94 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3.23 %
unclassified Caulobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales	1.61 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.61 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.94 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.42 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.61 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.94 %
Mesorhizobium albiziae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	2.42 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.61 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.94 %
Mesorhizobium albiziae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	2.42 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.61 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101074732	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300002245\|JGIcombinedJ26739_101785143	Not Available	516	Open in IMG/M
3300003505\|JGIcombinedJ51221_10255442	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300004091\|Ga0062387_100469098	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005179\|Ga0066684_10919863	Not Available	570	Open in IMG/M
3300005184\|Ga0066671_10521487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300005439\|Ga0070711_100593436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	923	Open in IMG/M
3300005530\|Ga0070679_101672150	Not Available	584	Open in IMG/M
3300005538\|Ga0070731_10201520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300005560\|Ga0066670_10132499	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300005602\|Ga0070762_10155692	Not Available	1371	Open in IMG/M
3300005610\|Ga0070763_10121428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1339	Open in IMG/M
3300005764\|Ga0066903_105491275	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006175\|Ga0070712_101545658	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300007982\|Ga0102924_1047892	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300009094\|Ga0111539_13372042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300009137\|Ga0066709_102312090	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300009137\|Ga0066709_103123583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300009137\|Ga0066709_104575130	Not Available	506	Open in IMG/M
3300009553\|Ga0105249_13014516	Not Available	541	Open in IMG/M
3300010048\|Ga0126373_10074034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3084	Open in IMG/M
3300010048\|Ga0126373_11195510	Not Available	826	Open in IMG/M
3300010048\|Ga0126373_11258622	Not Available	806	Open in IMG/M
3300010048\|Ga0126373_12071905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300010048\|Ga0126373_13156797	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010147\|Ga0126319_1263184	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300010358\|Ga0126370_11185212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300010358\|Ga0126370_12016547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300010360\|Ga0126372_10205743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1644	Open in IMG/M
3300010366\|Ga0126379_11256922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300010401\|Ga0134121_13146584	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010869\|Ga0126359_1741182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300010880\|Ga0126350_11128174	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300011120\|Ga0150983_14905764	Not Available	580	Open in IMG/M
3300011270\|Ga0137391_11074077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	653	Open in IMG/M
3300012212\|Ga0150985_105497299	Not Available	525	Open in IMG/M
3300012349\|Ga0137387_10948813	Not Available	619	Open in IMG/M
3300012363\|Ga0137390_10971963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	802	Open in IMG/M
3300012582\|Ga0137358_10103063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1933	Open in IMG/M
3300012929\|Ga0137404_11591015	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012931\|Ga0153915_12964705	Not Available	553	Open in IMG/M
3300012989\|Ga0164305_11757653	Not Available	558	Open in IMG/M
3300014497\|Ga0182008_10004253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8392	Open in IMG/M
3300015242\|Ga0137412_10983979	Not Available	605	Open in IMG/M
3300015245\|Ga0137409_11538283	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300016270\|Ga0182036_10075863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2209	Open in IMG/M
3300016319\|Ga0182033_11364478	Not Available	638	Open in IMG/M
3300016357\|Ga0182032_10992212	Not Available	717	Open in IMG/M
3300016404\|Ga0182037_10201667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1543	Open in IMG/M
3300016404\|Ga0182037_11775817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300017792\|Ga0163161_10725232	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300017961\|Ga0187778_11182805	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300017974\|Ga0187777_11136182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300018476\|Ga0190274_12466168	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300020140\|Ga0179590_1133118	Not Available	677	Open in IMG/M
3300021170\|Ga0210400_10059296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2982	Open in IMG/M
3300021362\|Ga0213882_10098343	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300021420\|Ga0210394_10304693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1398	Open in IMG/M
3300021441\|Ga0213871_10289310	Not Available	527	Open in IMG/M
3300021478\|Ga0210402_11755373	Not Available	547	Open in IMG/M
3300021479\|Ga0210410_10799897	Not Available	828	Open in IMG/M
3300021479\|Ga0210410_11278946	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300021560\|Ga0126371_11866815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	721	Open in IMG/M
3300021560\|Ga0126371_12121007	Not Available	677	Open in IMG/M
3300021560\|Ga0126371_12261583	Not Available	656	Open in IMG/M
3300022506\|Ga0242648_1020139	Not Available	848	Open in IMG/M
3300022726\|Ga0242654_10349861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300025916\|Ga0207663_10767626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	766	Open in IMG/M
3300025939\|Ga0207665_11305492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	578	Open in IMG/M
3300026538\|Ga0209056_10355641	Not Available	956	Open in IMG/M
3300027173\|Ga0208097_1004541	Not Available	1413	Open in IMG/M
3300027729\|Ga0209248_10154762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	683	Open in IMG/M
3300027903\|Ga0209488_10923024	Not Available	610	Open in IMG/M
3300028047\|Ga0209526_10263310	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300028813\|Ga0302157_10179643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1230	Open in IMG/M
3300029701\|Ga0222748_1016083	Not Available	1041	Open in IMG/M
3300029913\|Ga0311362_10308979	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300030518\|Ga0302275_10111915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1796	Open in IMG/M
3300030520\|Ga0311372_12352861	Not Available	606	Open in IMG/M
3300031546\|Ga0318538_10155803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300031546\|Ga0318538_10596101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300031682\|Ga0318560_10113992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1409	Open in IMG/M
3300031708\|Ga0310686_119243727	Not Available	603	Open in IMG/M
3300031713\|Ga0318496_10180205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300031719\|Ga0306917_10034925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3272	Open in IMG/M
3300031744\|Ga0306918_10630629	Not Available	840	Open in IMG/M
3300031744\|Ga0306918_11067541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300031744\|Ga0306918_11220030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031747\|Ga0318502_10983578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300031748\|Ga0318492_10551422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300031768\|Ga0318509_10083499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1698	Open in IMG/M
3300031777\|Ga0318543_10005213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4208	Open in IMG/M
3300031777\|Ga0318543_10399669	Not Available	616	Open in IMG/M
3300031780\|Ga0318508_1156828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	647	Open in IMG/M
3300031797\|Ga0318550_10230076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300031798\|Ga0318523_10409933	Not Available	673	Open in IMG/M
3300031846\|Ga0318512_10312760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300031893\|Ga0318536_10653260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031896\|Ga0318551_10586956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300031910\|Ga0306923_10059417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4241	Open in IMG/M
3300031910\|Ga0306923_10891868	Not Available	975	Open in IMG/M
3300031912\|Ga0306921_10084450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3659	Open in IMG/M
3300031942\|Ga0310916_10385430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300031945\|Ga0310913_10131850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1715	Open in IMG/M
3300031954\|Ga0306926_10109994	All Organisms → cellular organisms → Bacteria → Proteobacteria	3387	Open in IMG/M
3300031954\|Ga0306926_11820183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300032035\|Ga0310911_10538585	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300032039\|Ga0318559_10006132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4095	Open in IMG/M
3300032042\|Ga0318545_10210508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300032051\|Ga0318532_10274955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300032052\|Ga0318506_10333988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300032064\|Ga0318510_10538903	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032066\|Ga0318514_10142766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1238	Open in IMG/M
3300032066\|Ga0318514_10567954	Not Available	604	Open in IMG/M
3300032076\|Ga0306924_11397473	Not Available	747	Open in IMG/M
3300032091\|Ga0318577_10016038	All Organisms → cellular organisms → Bacteria → Proteobacteria	3040	Open in IMG/M
3300032091\|Ga0318577_10390999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300032261\|Ga0306920_104213571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300032515\|Ga0348332_12585520	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300033289\|Ga0310914_10181385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1873	Open in IMG/M
3300033289\|Ga0310914_11088471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	700	Open in IMG/M
3300033290\|Ga0318519_10886482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.16%
Host-Associated	Host-Associated	4.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.13%
Plants	Host-Associated → Plants	4.84%
Aquatic	Environmental → Aquatic	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.29%
Freshwater	Environmental → Aquatic → Freshwater	3.23%
Peat	Environmental → Terrestrial → Peat	3.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.61%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005403961	3300002245	Forest Soil	QPVIPGIAITAGQFAELVDTCRHLERLDTAGQGLIALTIPR*
JGIcombinedJ26739_1010747322	3300002245	Forest Soil	APGLAIGEAQFAELIDTCRHLDTIDAAAKKLIGLTIPG*
JGIcombinedJ26739_1017851432	3300002245	Forest Soil	APGLAIGETQFAELIDGCRHLDRVDRPAARLISLTIPS*
JGIcombinedJ51221_102554421	3300003505	Forest Soil	RPITPGLAIGETQFAELIDTCRRLDRTDRAAEKLIALTIPA*
Ga0062387_1004690982	3300004091	Bog Forest Soil	AGRIRPIAPGLAIGETQFAELIDTCGHLDRIDRAAQKLIALTIPS*
Ga0066684_109198632	3300005179	Soil	TPGLAISETQFAALIDTCRHLDRADRAAARLISLTIPREV*
Ga0066671_105214871	3300005184	Soil	QARRIRPITPGLAISDSQFAELINTCRHLDRVDRAAARLISRTIPS*
Ga0070711_1005934362	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EQARRIQPISTGLAISEAQFAEVVDTCRRLDQFDAAAHRLIALTIPR*
Ga0070679_1016721502	3300005530	Corn Rhizosphere	TLTSRLQPIAKGLAIPARQFEELIDTCRHLEGVDNAARQLIARTVP*
Ga0070731_102015201	3300005538	Surface Soil	IKISPARFAELIDTCRRLDAIEGAAQKLVGLTIPT*
Ga0066670_101324991	3300005560	Soil	ARRIGPIAPGTAIGEAGFTELVDACRNLDRLDHAAERLIALTIPA*
Ga0070762_101556921	3300005602	Soil	PITPGLAISEAQFAELIDTCRHLDRHDRAAEKLIGLTIPS*
Ga0070763_101214282	3300005610	Soil	IAPGLAISETQFAELIDGCRHLDRVDRAAARLISLTVPA*
Ga0066903_1054912752	3300005764	Tropical Forest Soil	RIRPITPGLAIGEGQFGELIDTCRRLDRVEQTAQRLIALTTPMGA*
Ga0070712_1015456582	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GLGIPEAQFTRLIDTCRNLDSIDGAADKLVSLTIPA*
Ga0102924_10478923	3300007982	Iron-Sulfur Acid Spring	RRIRPVAPGLAIGEAQYAELIDTCRHLDTIDNAARRLIALTIPA*
Ga0111539_133720421	3300009094	Populus Rhizosphere	AIGEAQFDGLIDSCRRLDTLDRAAETLIGLTIPA*
Ga0066709_1023120901	3300009137	Grasslands Soil	THLNKPIAPGLAITQAQSAILIDACRHLDNIPGAAEKLISLTIP*
Ga0066709_1031235833	3300009137	Grasslands Soil	MRGIAPGLAISETQFAELIDTCRHLDTLDRAASSLIDLTLPA*
Ga0066709_1045751301	3300009137	Grasslands Soil	EISEARYAELIDTCRHLDRHDRAAAKLIALTLPS*
Ga0105249_130145161	3300009553	Switchgrass Rhizosphere	QPFSSGLAISEAQFAEVVDTCRRLDQLDAAGQRMIALTIPR*
Ga0126373_100740341	3300010048	Tropical Forest Soil	PGLAVSETQFAELIDTCRHLDRIDAAAQKLIALTIPS*
Ga0126373_111955101	3300010048	Tropical Forest Soil	PGLAISEGEFSELIDTCRRLDRTERAAERLIALTIPA*
Ga0126373_112586222	3300010048	Tropical Forest Soil	EVRRIRPIAAGLAISDAQFAELIDTCRRLDRAERAAQDLISLTLPLGRSATV*
Ga0126373_120719052	3300010048	Tropical Forest Soil	GLAISEAQFAELIDTCRHLDTIDRAAEKLIGLTIPS*
Ga0126373_131567972	3300010048	Tropical Forest Soil	APGLAIPESQFAELIDTCRNLDRVERAGGRLIALTIPA*
Ga0126319_12631842	3300010147	Soil	DFEEQARRIRPIAPGLAISDARFAELIDTCRNIDRIDRAAERLISLTIA*
Ga0126370_111852121	3300010358	Tropical Forest Soil	PGLAISEAEFGELIDCCRHLDRLERAAEKLIALTIPS*
Ga0126370_120165471	3300010358	Tropical Forest Soil	APGLAINKAQFAELIEACRHLDRADRAAGTLIKLTIPA*
Ga0126372_102057431	3300010360	Tropical Forest Soil	GLAIREGQFAELIDTCCHLDRHEQAAEKLIALTIPS*
Ga0126379_112569221	3300010366	Tropical Forest Soil	IRPIAPGLAISETQFAELIDTCRHLDGVDGAAKKLIALTVPG*
Ga0134121_131465841	3300010401	Terrestrial Soil	TPGLAISGIQFAELIDACRTLDRIDDAGRKLIALTIPA*
Ga0126359_17411823	3300010869	Boreal Forest Soil	PGLAISPAQFAELIDACRHLDDVDNAAARLIGLTIPA*
Ga0126350_111281742	3300010880	Boreal Forest Soil	RISPIVPGLAISPAQFAELIDTCRNLDRIDSTAQRLIALTIPG*
Ga0150983_149057641	3300011120	Forest Soil	RRIRPITPGLAISETQFAELIDTCRHLDRVDQAAARLISLTVPS*
Ga0137391_110740772	3300011270	Vadose Zone Soil	IAIGEAQYDRLIDCCRHLDTLDHAAETLIGLTIPG*
Ga0150985_1054972991	3300012212	Avena Fatua Rhizosphere	ISPIAPGLAISEAQFAELIDTCRHLDRVERGAQQLIALTVPS*
Ga0137387_109488132	3300012349	Vadose Zone Soil	LAIGESQFAELIDTCRRLDRLDRAASKLISLTIPV*
Ga0137390_109719632	3300012363	Vadose Zone Soil	GLAISEGQFTELIDTCRHLDRLDRAAHKLISLTIPA*
Ga0137358_101030634	3300012582	Vadose Zone Soil	ALALAIGETQFAELIDACRHLDRIDRAAERLISLTVPG*
Ga0137404_115910151	3300012929	Vadose Zone Soil	MLRITPGLAIDEAQFERLIETCRHLDGVERAAATLIALTIPG*
Ga0153915_129647052	3300012931	Freshwater Wetlands	IRPIAPGLAIAEAQYERLIDTCRHLDTLDHAAGELITLTIPG*
Ga0164305_117576531	3300012989	Soil	SAGLAISETQFAELVDTCRRLDRFDTAGRRLIALTIPR*
Ga0182008_1000425311	3300014497	Rhizosphere	RLAIKEGRFAELVDTCRKLDQFDAAAQKLIGLTIPR*
Ga0137412_109839791	3300015242	Vadose Zone Soil	ITPGLAIGETQFAELIDTCRRLDRTDRAAEKLIALTIPA*
Ga0137409_115382832	3300015245	Vadose Zone Soil	PGLAINEAQFTELIDTCRHLDGTDRAAEKLIALTIAS*
Ga0182036_100758633	3300016270	Soil	RIYPIASGLAVRETQFAELIDTCRRLDGTDRVAEKLIRLTIPS
Ga0182033_113644781	3300016319	Soil	RIRPIAPGLAISEAQYAKLLDTCRHLDDIDGAAEKLIALTIPS
Ga0182032_109922121	3300016357	Soil	SPPHPPDRPGVAIGNAQFAELIDCRGHLDLVDRAAEKLISLTIRS
Ga0182037_102016673	3300016404	Soil	RIRPIAAGLAVGETQFAELIDTCHHLDRMDRAAEKLIALTIPS
Ga0182037_117758172	3300016404	Soil	FDEQARRIRPIAAGLAVGETQFAELIDTCRHLDRLDLAAQKLIALTIPA
Ga0163161_107252321	3300017792	Switchgrass Rhizosphere	IAIGEAQFDRLIDSCRHLETLDRAAETLIGLTIPA
Ga0187778_111828051	3300017961	Tropical Peatland	ETGLAIAPAQYAELIDTCRRLDSVDNAAQKLIALTISG
Ga0187777_111361822	3300017974	Tropical Peatland	VAPGLAISEAQYDRLIDSCRHLDRLDRAAQTLIGLTVPG
Ga0190274_124661681	3300018476	Soil	ILPIAPGLAIPEPQFARLIDTCRNLERNDEAAHTLIGLTVPA
Ga0179590_11331182	3300020140	Vadose Zone Soil	EARRIRPITPGLAISETQFAALIDGCRRLDRVDRAAARLISLTVSA
Ga0210400_100592961	3300021170	Soil	RRIRPITPGLAISETQFAELIDGCRHLDRVDRAAARLISLTVPA
Ga0213882_100983432	3300021362	Exposed Rock	GLAISEAQFAALIDSCRHLDDLDRAAKLIALTIPT
Ga0210394_103046932	3300021420	Soil	RPIAPGLAISETQFAELIDGCRHLDRVDRAAARLISLTVPA
Ga0213871_102893101	3300021441	Rhizosphere	EEEARRIAPIASGLAIGEGQFARLIDGSRHLDRLDRAAEQLIRLTIPA
Ga0210402_117553732	3300021478	Soil	RRIRPVAAGLAIGEAQFAELIDTCRHLDRTDRAAQKLILLTIPL
Ga0210410_107998971	3300021479	Soil	IQPIAPGLAIPEIQFAALIDVCRNLDRIDNAASRLIALTLPHGG
Ga0210410_112789463	3300021479	Soil	PGLAIPEAQFAELIDACRHLDTIDHAAQKLIALTIPS
Ga0126371_118668151	3300021560	Tropical Forest Soil	PIAPGLAISETQFAELIDACRHLDDLDRAAQKLIALTIPP
Ga0126371_121210071	3300021560	Tropical Forest Soil	VCRIRPIAPGLAISEVQFVELIDACRHLDRVEQTAQHLIALTIPS
Ga0126371_122615831	3300021560	Tropical Forest Soil	RRIRPIAPGLAIPETQFVELIDACRRLDAIDRAADRLIALTIPA
Ga0242648_10201392	3300022506	Soil	PIAPGLAISETQFAELIDTCRHLDRHDRAAENLIGLTIPS
Ga0242654_103498611	3300022726	Soil	DFEEHARRIRPIAPGLAIGEAQFGELVDTCRHLDLMDRAAERVIALTVPA
Ga0207663_107676262	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QARRIRPVTPGLAISEGQFTELIDACRHLEKIDGAAEKLISLTIDGGH
Ga0207665_113054922	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TPGLAIGETQFAELIDTCRRLDRTDRAAEKLIALTIPA
Ga0209056_103556412	3300026538	Soil	LAIGETQFTELIDTCRHLDRIDRAAEKLIALTIPA
Ga0208097_10045411	3300027173	Forest Soil	RPITPALAISEAQFAELIDTCRHLDRHDRAAEKLIGLTIPS
Ga0209248_101547622	3300027729	Bog Forest Soil	RIRPIGPGLAISETQFSELIDTCRHLDRADRAAQQLIALTIPA
Ga0209488_109230242	3300027903	Vadose Zone Soil	GLAIGEAQFAELIDTCRHLDTIDAAAEKLIRLTIPV
Ga0209526_102633102	3300028047	Forest Soil	RRIKPIAPGLAIGEAQFAELIDACRHLDTLDAAAKKLIGLTIPG
Ga0302157_101796433	3300028813	Bog	PVKPGLAISPSRFDGLIDTCRHLDTIDTAASNLFVLTIPQ
Ga0222748_10160831	3300029701	Soil	PIAPGLAISETQFAELIDTCRHLDRHDRAAEKLIGLTIPS
Ga0311362_103089792	3300029913	Bog	LAIGGRQFSELIDCCRNLDHVDRAAEELIALTIPA
Ga0302275_101119154	3300030518	Bog	VKPGLAISPSRFDGLIDTCRHLDTIDTAASNLIVLTIPQ
Ga0311372_123528611	3300030520	Palsa	PIESGIAVSPARYAELTDTCRHLDEIDNAAQRLIGLTIPN
Ga0318538_101558031	3300031546	Soil	RRIRPIAPGFAISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAE
Ga0318538_105961012	3300031546	Soil	TSGLAISDKQFGELIDTCRHLDRIDRAADKLISLTIPA
Ga0318560_101139923	3300031682	Soil	AISEAQFVELIDTCRRLDRIDPAAEKLIGLTIPARTPQRSAD
Ga0310686_1192437271	3300031708	Soil	GLAISETQYDRLIDSCRNLETLDRAADTLIGLTIPA
Ga0318496_101802052	3300031713	Soil	AISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0306917_100349251	3300031719	Soil	GFAISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0306918_106306292	3300031744	Soil	HPPDRPGVAIGNAQFAELIDCRGHLDLVDRAAEKLISLTIRS
Ga0306918_110675411	3300031744	Soil	AAGLAVGETQFAELIDTCRHLDRMDHATEKLIALTIPS
Ga0306918_112200301	3300031744	Soil	IRPITSGLAISESQFAELIDTCRHLDHIDAAAGKLIGLTIPS
Ga0318502_109835781	3300031747	Soil	PSLAIGKAQFAELIDCRRHLDLVDRVAEKLISLTIRS
Ga0318492_105514222	3300031748	Soil	RIYPIASGLAVRETQFAELIDTCRRLDGTDRVAEKLIGLTIPS
Ga0318509_100834992	3300031768	Soil	RRIRPIAPGLAISEAQFVELIDTCRRLDRIDPAAEKLIGLTIPARTPQRSAD
Ga0318543_100052134	3300031777	Soil	PGLAISEAQFAELINTCRHLDHIDRAGEKLIGLTVSA
Ga0318543_103996691	3300031777	Soil	IAPGLAIGEPQFAELIDTCRHLERRDRAAPKLIALTIPA
Ga0318508_11568281	3300031780	Soil	PGLAIPEAQFVELIDTCRRLDRIDRAAQDLIALTVAT
Ga0318550_102300761	3300031797	Soil	AISEAQVVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0318523_104099332	3300031798	Soil	QRIRPIAPGLAISEAQYAKLLDTCRHLDDIDGAAEKLIALTIPS
Ga0318512_103127601	3300031846	Soil	PITPGLAVSETQFDELIDTCRRLDRTDRAAERLIVLTIPS
Ga0318536_106532601	3300031893	Soil	ARRIYPIASGLAVRETQFAELIDTCRRLDGTDRVAEKLIRLTIPS
Ga0318551_105869561	3300031896	Soil	VELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0306923_100594171	3300031910	Soil	PGLAIGEPQFAELIDTCRHLERRDRAAPKLIALTIPA
Ga0306923_108918682	3300031910	Soil	REFILNFEEVDRRIRPIAPSLAIGKAQFAELIDCRRHLDLVDRVAEKLISLTIRS
Ga0306921_100844501	3300031912	Soil	PGFAISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0310916_103854301	3300031942	Soil	IAPGLAISEAQFVELIDTCRRLDRIDPAAEKLIGLTIPARTPQRSAD
Ga0310913_101318501	3300031945	Soil	IAISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0306926_101099941	3300031954	Soil	RPIAPGLAISETQFAELIDTCRQLDRLDRAAEQLISLTIPS
Ga0306926_115386662	3300031954	Soil	RIRPVASGLAISDAQFAELIDACRHLDGIEAAGQQLIALTIPR
Ga0306926_118201832	3300031954	Soil	EQARRIRPIAAGLAVGETQFAELIDTCRHLDRMDHATEKLIALTIPS
Ga0310911_105385851	3300032035	Soil	TPGLAIGEGQFGELIDTCRRLDRVEQAAQRLIALTTPMGA
Ga0318559_100061321	3300032039	Soil	IRPIAPGLAISEAQYAKLLDTCRHLDDIDGAAEKLIALTIPS
Ga0318545_102105082	3300032042	Soil	PGLAVSETQFDELIDTCRRLDRTDRAAERLIVLTIPS
Ga0318532_102749552	3300032051	Soil	IAGGLAVRETQFAELIDTCRRLDSTDRVAEKLIGLTIPS
Ga0318506_103339881	3300032052	Soil	SGLAISDKQFGELIDTCRHLDRIDRAADKLISLTIPA
Ga0318510_105389032	3300032064	Soil	IRPIAPGLAISEAQFAELLDSCRHLDLVDRAAEMLIGLTVPG
Ga0318514_101427661	3300032066	Soil	EFEEQARRIYPIAGGLAVRETQFAELIDTCRRLDSTDRVAEKLIGLTIPS
Ga0318514_105679542	3300032066	Soil	LAISEAQFAELIDTCRHLDHIDRAGEKLIGLTISA
Ga0306924_113974731	3300032076	Soil	LAIGEAQFAELIDTCRNLDRTDRAALKLISLTIPT
Ga0318577_100160381	3300032091	Soil	IRGVAPGLAITETQFAELIDCCRHLDRLDQAAEKLISLTIPS
Ga0318577_103909992	3300032091	Soil	PIAPGFAISEAQFVELIDTCRRLDRIDRAAEKLIGLTIPARTPQRSAD
Ga0306920_1042135711	3300032261	Soil	DFEEQARRIYPIASGLAVRETQFAELIDTCRRLDGTDRVAEKLIGLTIPS
Ga0348332_125855201	3300032515	Plant Litter	PGLAIAQAQFAELIDACRHLDRAERAAEKLIALTIP
Ga0310914_101813855	3300033289	Soil	IATGLAIGEPQFAELIDTCRHLERRDRAAPKLIALTIPA
Ga0310914_110884711	3300033289	Soil	GLAIPEAQFAALIDTCRRLDRIDRAAQNLIALTVAT
Ga0318519_108864822	3300033290	Soil	IRPIAAGLAVGETQFAELIDTCRHLDRMDHATEKLIALTIPS

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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