Metagenome / Metatranscriptome Family F067484

Basic Information
Family ID	F067484
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	45 residues
Representative Sequence	PVVSEDNIEKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ
Number of Associated Samples	102
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.60 %
% of genes near scaffold ends (potentially truncated)	98.40 %
% of genes from short scaffolds (< 2000 bps)	86.40 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (93.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.200 % of family members)
Environment Ontology (ENVO)	Unclassified (27.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.200 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 22.86% Coil/Unstructured: 57.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00487	FA_desaturase	6.40
PF00497	SBP_bac_3	3.20
PF13091	PLDc_2	3.20
PF00923	TAL_FSA	3.20
PF04397	LytTR	3.20
PF04392	ABC_sub_bind	2.40
PF02743	dCache_1	2.40
PF01982	CTP-dep_RFKase	2.40
PF01266	DAO	2.40
PF02699	YajC	1.60
PF01850	PIN	1.60
PF00296	Bac_luciferase	1.60
PF02310	B12-binding	1.60
PF08240	ADH_N	1.60
PF00884	Sulfatase	1.60
PF13378	MR_MLE_C	1.60
PF07885	Ion_trans_2	1.60
PF01925	TauE	0.80
PF00072	Response_reg	0.80
PF13191	AAA_16	0.80
PF00106	adh_short	0.80
PF00196	GerE	0.80
PF00873	ACR_tran	0.80
PF00034	Cytochrom_C	0.80
PF02775	TPP_enzyme_C	0.80
PF13387	DUF4105	0.80
PF07992	Pyr_redox_2	0.80
PF04333	MlaA	0.80
PF11249	DUF3047	0.80
PF05163	DinB	0.80
PF02673	BacA	0.80
PF04989	CmcI	0.80
PF00675	Peptidase_M16	0.80
PF01594	AI-2E_transport	0.80
PF13436	Gly-zipper_OmpA	0.80
PF02932	Neur_chan_memb	0.80
PF10282	Lactonase	0.80
PF13683	rve_3	0.80
PF00484	Pro_CA	0.80
PF02746	MR_MLE_N	0.80
PF06863	DUF1254	0.80
PF13231	PMT_2	0.80
PF13193	AMP-binding_C	0.80
PF12867	DinB_2	0.80
PF00089	Trypsin	0.80
PF02515	CoA_transf_3	0.80
PF05425	CopD	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	6.40
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	6.40
COG1339	Archaeal CTP-dependent riboflavin kinase	Coenzyme transport and metabolism [H]	4.80
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	3.20
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	2.40
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.40
COG1862	Protein translocase subunit YajC	Intracellular trafficking, secretion, and vesicular transport [U]	1.60
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.60
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.60
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.80
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.80
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.80
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	0.80
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.80
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.80
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG2853	Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3510	Cephalosporin hydroxylase	Defense mechanisms [V]	0.80
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	40.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.20 %
Unclassified	root	N/A	6.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	40.00 %
Unclassified	root	N/A	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	40.00 %
Unclassified	root	N/A	6.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.80 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.80 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.60 %
Unclassified	root	N/A	6.40 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.20 %
Unclassified	root	N/A	6.40 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	2.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.80 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.20 %
Unclassified	root	N/A	6.40 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	2.40 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.80 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.80 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.20 %
Unclassified	root	N/A	6.40 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	2.40 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.80 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.80 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105574924	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1023	Open in IMG/M
3300000789\|JGI1027J11758_12684523	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	650	Open in IMG/M
3300002560\|JGI25383J37093_10013603	All Organisms → cellular organisms → Bacteria	2692	Open in IMG/M
3300002561\|JGI25384J37096_10069307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1298	Open in IMG/M
3300004157\|Ga0062590_100620602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300004268\|Ga0066398_10059925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	794	Open in IMG/M
3300004480\|Ga0062592_100991708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300005332\|Ga0066388_101008361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1396	Open in IMG/M
3300005434\|Ga0070709_10231788	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300005440\|Ga0070705_100073884	Not Available	2070	Open in IMG/M
3300005441\|Ga0070700_100717018	Not Available	797	Open in IMG/M
3300005451\|Ga0066681_10599086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300005467\|Ga0070706_101765168	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300005518\|Ga0070699_101234026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300005536\|Ga0070697_100005506	All Organisms → cellular organisms → Bacteria	9762	Open in IMG/M
3300005536\|Ga0070697_100616088	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005586\|Ga0066691_10855445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300005764\|Ga0066903_106043139	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005764\|Ga0066903_107427447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	566	Open in IMG/M
3300005764\|Ga0066903_108404450	Not Available	527	Open in IMG/M
3300005841\|Ga0068863_100116436	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300006032\|Ga0066696_10731218	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006854\|Ga0075425_100033927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5677	Open in IMG/M
3300006969\|Ga0075419_10022894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3865	Open in IMG/M
3300007076\|Ga0075435_101371344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300007255\|Ga0099791_10059717	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300007255\|Ga0099791_10493136	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300009089\|Ga0099828_11751637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300009094\|Ga0111539_11352121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	826	Open in IMG/M
3300009100\|Ga0075418_12369538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300009147\|Ga0114129_10351975	All Organisms → cellular organisms → Bacteria → Proteobacteria	1951	Open in IMG/M
3300009553\|Ga0105249_13259179	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009792\|Ga0126374_11279520	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010043\|Ga0126380_10731079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300010046\|Ga0126384_10083941	All Organisms → cellular organisms → Bacteria → Proteobacteria	2304	Open in IMG/M
3300010046\|Ga0126384_10395269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1166	Open in IMG/M
3300010304\|Ga0134088_10367650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	699	Open in IMG/M
3300010304\|Ga0134088_10610825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	543	Open in IMG/M
3300010322\|Ga0134084_10245064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	645	Open in IMG/M
3300010323\|Ga0134086_10444072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	528	Open in IMG/M
3300010323\|Ga0134086_10477114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	513	Open in IMG/M
3300010336\|Ga0134071_10085773	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300010336\|Ga0134071_10171713	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300010359\|Ga0126376_11074199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	811	Open in IMG/M
3300010359\|Ga0126376_12837239	Not Available	534	Open in IMG/M
3300010362\|Ga0126377_11532518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300010397\|Ga0134124_10793177	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010398\|Ga0126383_10324626	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300010398\|Ga0126383_13286691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300010401\|Ga0134121_11954860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300011269\|Ga0137392_10438011	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300012360\|Ga0137375_11040025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300012362\|Ga0137361_10861931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300012373\|Ga0134042_1090317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	786	Open in IMG/M
3300012582\|Ga0137358_10698593	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012675\|Ga0137337_1051329	Not Available	647	Open in IMG/M
3300012685\|Ga0137397_10084191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2316	Open in IMG/M
3300012907\|Ga0157283_10329685	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012916\|Ga0157310_10229448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300012930\|Ga0137407_10491755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1145	Open in IMG/M
3300012930\|Ga0137407_10699170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300012948\|Ga0126375_10102369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1700	Open in IMG/M
3300012948\|Ga0126375_11209677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	629	Open in IMG/M
3300012948\|Ga0126375_11775747	Not Available	537	Open in IMG/M
3300012976\|Ga0134076_10109299	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300014318\|Ga0075351_1026140	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300014968\|Ga0157379_11509498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300015371\|Ga0132258_11059669	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300015373\|Ga0132257_103887158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300015374\|Ga0132255_100862518	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300016319\|Ga0182033_11816239	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300016445\|Ga0182038_11979915	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300017939\|Ga0187775_10163274	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300018082\|Ga0184639_10653569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300018469\|Ga0190270_12734237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300019997\|Ga0193711_1029985	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	682	Open in IMG/M
3300020150\|Ga0187768_1014719	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300020170\|Ga0179594_10310453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	597	Open in IMG/M
3300021432\|Ga0210384_10062144	All Organisms → cellular organisms → Bacteria	3373	Open in IMG/M
3300021560\|Ga0126371_10887274	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1036	Open in IMG/M
3300025910\|Ga0207684_10004737	All Organisms → cellular organisms → Bacteria	12757	Open in IMG/M
3300025910\|Ga0207684_10912950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300025922\|Ga0207646_10265817	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300026088\|Ga0207641_12524134	Not Available	512	Open in IMG/M
3300026089\|Ga0207648_11106568	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300026296\|Ga0209235_1016003	All Organisms → cellular organisms → Bacteria	4082	Open in IMG/M
3300026313\|Ga0209761_1270617	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	621	Open in IMG/M
3300026369\|Ga0257152_1001404	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300026469\|Ga0257169_1057678	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026515\|Ga0257158_1004930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1841	Open in IMG/M
3300026524\|Ga0209690_1151993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	846	Open in IMG/M
3300026536\|Ga0209058_1322068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	533	Open in IMG/M
3300026547\|Ga0209156_10119857	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300027395\|Ga0209996_1004042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1859	Open in IMG/M
3300027617\|Ga0210002_1031679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300027671\|Ga0209588_1194133	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300027846\|Ga0209180_10225276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300027846\|Ga0209180_10797958	Not Available	506	Open in IMG/M
3300027907\|Ga0207428_10056939	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300028381\|Ga0268264_11963882	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300030006\|Ga0299907_10791130	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031640\|Ga0318555_10165677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1186	Open in IMG/M
3300031679\|Ga0318561_10479678	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031720\|Ga0307469_10080252	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300031720\|Ga0307469_10261350	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300031720\|Ga0307469_10612321	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031720\|Ga0307469_11879986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300031740\|Ga0307468_101072031	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031764\|Ga0318535_10097254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1286	Open in IMG/M
3300031770\|Ga0318521_10430325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300031781\|Ga0318547_10043356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2387	Open in IMG/M
3300031781\|Ga0318547_10444929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	798	Open in IMG/M
3300031820\|Ga0307473_10814034	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	667	Open in IMG/M
3300031892\|Ga0310893_10327413	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300032174\|Ga0307470_10181545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1324	Open in IMG/M
3300032174\|Ga0307470_10323279	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300032174\|Ga0307470_11535521	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300032180\|Ga0307471_100313061	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300032180\|Ga0307471_101286549	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300032180\|Ga0307471_104331691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300032205\|Ga0307472_100784615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	868	Open in IMG/M
3300032401\|Ga0315275_10181229	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300033004\|Ga0335084_12431241	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300033502\|Ga0326731_1058374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	900	Open in IMG/M
3300034147\|Ga0364925_0327615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.60%
Host-Associated	Host-Associated	14.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.20%
Plants	Host-Associated → Plants	14.40%
Aquatic	Environmental → Aquatic	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.20%
Sediment	Environmental → Aquatic → Sediment	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Peat	Environmental → Terrestrial → Peat	0.80%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Lake	Environmental → Aquatic → Freshwater → Lake	0.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012675	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1055749241	3300000364	Soil	ILSVDGIPVVSEDNIEKIRDKLAALSRGTPFKMNVLRDGRVIDLTGVTE*
JGI1027J11758_126845231	3300000789	Soil	IEKIRDKLAALSRGTPFKMNVLRDGRVIDLTGVTE*
JGI25383J37093_100136031	3300002560	Grasslands Soil	VSEDNIEKIRNRLAGAPLGTPFKMSVLRAGKVIELTGTTQ*
JGI25384J37096_100693071	3300002561	Grasslands Soil	SVDGIPVVSEDNIEKIRNMLASAPLGTPFKMNVLRAGKVIELTGTTQ*
Ga0062590_1006206022	3300004157	Soil	LSEDNIEKIRNTLAARTPGSSFKMSVLRAGKVIELTGTR*
Ga0066398_100599252	3300004268	Tropical Forest Soil	IPVVSEDNIEKIRNKLAGAPVGTPFKASVLRAGKVIELSGTSQ*
Ga0062592_1009917081	3300004480	Soil	LSVDDIPVVSEDNIEQIRNKLAGVPRGTPFTMNVLRAGKILVLTGRTQGASR*
Ga0066388_1010083612	3300005332	Tropical Forest Soil	SVAGIPVESEDNIEKIRNALVGVSPGASFTMKVLRGGKVIELTGKAQ*
Ga0070709_102317883	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VVSEENIEKIRNQLADAAPGTPFKMSVLRAGKVIELTGTTQ*
Ga0070705_1000738844	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IILSVDDIPVVSEDNIEQIRNKLAGVPRGTPFKMNVLRAGKVLVLTGTTEGASR*
Ga0070700_1007170181	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VVSEDNIEQIRNKLAGVPRGTPFKMNVLRAGKILVLTGTTQGASR*
Ga0066681_105990862	3300005451	Soil	GIPVVSEDNIEKIRNRLAGAPLGTPFKMNVLRAGKVVELTGTTQ*
Ga0070706_1017651681	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PVVSEDNIEKIRNRLAAAPLGIPFKMNVLRAGKVIELTGTSQ*
Ga0070699_1012340261	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ALGGDVILSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTTQ*
Ga0070697_10000550610	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSEENIEKIRNTLATLASVAPGAAVKMNVLRAGKIIELTGTSR*
Ga0070697_1006160882	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NIEKIRNKLASVPGGTPFTISVLRAGKVIELAGKTKGSVVDF*
Ga0066691_108554452	3300005586	Soil	NIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTTQ*
Ga0066903_1060431392	3300005764	Tropical Forest Soil	SEDNIEKIRNRLAGAAPGTPFKMNVLRAGKVIALQGAAQ*
Ga0066903_1074274472	3300005764	Tropical Forest Soil	DGIPVVSEDNIEKIRSKLAGAPAGTPFKVSVLRAGKVIELTGTAQ*
Ga0066903_1084044501	3300005764	Tropical Forest Soil	ILSVEGISAVSEDNIEKIREKLAKAPVGTPFSMTVLRGGKVLELKGSSQ*
Ga0068863_1001164363	3300005841	Switchgrass Rhizosphere	ILSVQGIPIVSEENIEKVRNTLAEVAPGTPIRMHVLRGGKIIELTGTAQ*
Ga0066696_107312181	3300006032	Soil	GREMALGGDIIRSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMSVLRAGKVIELTGTTQ*
Ga0075425_1000339271	3300006854	Populus Rhizosphere	DIILSVDDIPVVSEENIEKIRNKLAGATPGARFKMSVLRAGKVIELTGPSQ*
Ga0075419_100228948	3300006969	Populus Rhizosphere	VSEDNIEKIRNALAGVAPGAEFKMSVLRAGKVIELTGTAD*
Ga0075435_1013713442	3300007076	Populus Rhizosphere	VVSEENIEKIRNTLAGLPPGAPFKMNVLRAGKVIELAGTSQ*
Ga0099791_100597171	3300007255	Vadose Zone Soil	DIILSVGGIPVVSEDNIEQIRNRLAGTPLGTPFKLNVLRAGKVIELTGTTQ*
Ga0099791_104931361	3300007255	Vadose Zone Soil	PVGGDIIISVEDIPVVSEENIEKIRNKLAGSAPGSTFKMIVLRAGKVLELTGTSQ*
Ga0099828_117516371	3300009089	Vadose Zone Soil	GDIILSVDGIPVVSEDNIEKIRNRLAGAPPGTPLKMKVLRAGKVIELTSTTQ*
Ga0111539_113521211	3300009094	Populus Rhizosphere	VVSEDNIEKIRNYLAATPPGTMFKMTVLRAGRILELTGTTSQIRGD*
Ga0075418_123695382	3300009100	Populus Rhizosphere	EDNIEQIRNRLPSIAPGAAFKMSVLRAGKVIELTGSAE*
Ga0114129_103519753	3300009147	Populus Rhizosphere	EENIEKIRNTLAGLPPGAPFKMNVLRAGKVIELAGTSQ*
Ga0105249_132591792	3300009553	Switchgrass Rhizosphere	NKLAGVPRGTPFKMNVLRAGKILVLTGTTQGASR*
Ga0126374_112795202	3300009792	Tropical Forest Soil	VSEDNIEKIRTRLAAAPAGTPFKVSVLRAGKVLELAGTSP*
Ga0126380_107310792	3300010043	Tropical Forest Soil	EENIEKIRNKLAALPPGTPFKIGVLRAGKLIELAGVAQ*
Ga0126384_100839413	3300010046	Tropical Forest Soil	DIILSVDGIPVVSEDNIEKIRNKLAGAPVGTPFKASVLRAGKVIELSGTSQ*
Ga0126384_103952693	3300010046	Tropical Forest Soil	DIILSVDGIPVVSEDNIEKIRNKLAGAPVGTPFKVSVLRAGKVIELTGTTQ*
Ga0134088_103676501	3300010304	Grasslands Soil	IALGGDIILSVDGIPVVSEDNIEKIRNRLASAPLGTPFKMSVLRAGKVIELTGTPQ*
Ga0134088_106108252	3300010304	Grasslands Soil	VVSEDNIEKIRNQLAAVPRGTPFKMNVLRDGRVIDLTGVTE*
Ga0134084_102450643	3300010322	Grasslands Soil	ALGGDIILSVDGIPVVSEDNIEKIRNRLAVAPSGTPFKMNVLRAGKVIELTGTTQ*
Ga0134086_104440722	3300010323	Grasslands Soil	ILSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTTQ*
Ga0134086_104771142	3300010323	Grasslands Soil	LSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMSVLRAGKVIELTGTTQ*
Ga0134071_100857734	3300010336	Grasslands Soil	PVVSEDNIEKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ*
Ga0134071_101717132	3300010336	Grasslands Soil	LSVDGIPVVSEDNIEKIRNRLAGAPLGALFKMNVLRAGKVIELTSTAQ*
Ga0126376_110741993	3300010359	Tropical Forest Soil	IPVVSEDNIEKIRNKLAGAPAGTPFKVSVLRAGKVIELTGTAQ*
Ga0126376_128372391	3300010359	Tropical Forest Soil	IEKIRSRLAEIPVGTPFKMAVLRAGKVVELTGTAQ*
Ga0126377_115325182	3300010362	Tropical Forest Soil	EQIRNRLAAVTPGAPIKMSVLRAGKVIELTGTSQ*
Ga0134124_107931771	3300010397	Terrestrial Soil	GGDIILSIDDIPVVSEDNIEQIRNKLAGVPRGTPFKMNVLRAGKILVLTGTTQGASR*
Ga0126383_103246263	3300010398	Tropical Forest Soil	DDIPVVSEDNIEQIRNKLARAPVGTPFKVTVLRAGKIIELSGTTP*
Ga0126383_132866911	3300010398	Tropical Forest Soil	ILTVSGIPIVSEDNIEKVRTTLAAAPPGSPFKMTVLRGGKVIELTGTAQ*
Ga0134121_119548601	3300010401	Terrestrial Soil	ILSVDDIPVVSEDNIEQIRNKLAGVPRGTPFKMSVLRAGKALVLTGTTQGASR*
Ga0137392_104380111	3300011269	Vadose Zone Soil	DNIEKIRNRLASAPLGTPFKMSVLRAGKVIELTGTTQ*
Ga0137375_110400251	3300012360	Vadose Zone Soil	LSVEDIPVVSEDNIEKIRKRLAAAPLGTPFKMNVLRAGKIIELTGTSQ*
Ga0137361_108619312	3300012362	Vadose Zone Soil	IPVVSEDNIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTTE*
Ga0134042_10903173	3300012373	Grasslands Soil	VDGIPVVSEDNIEKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ*
Ga0137358_106985933	3300012582	Vadose Zone Soil	VVSEESIEKIRNRLGGAAPRSTIKMSVLRARKLIELTGTSQ*
Ga0137337_10513291	3300012675	Soil	NIEKIRNRLAAAPPGTPFKVTALRAGKVVELTGKAQQ*
Ga0137397_100841914	3300012685	Vadose Zone Soil	LSVDGSPVVSEDNIEQIRNRLASGAPGAPFKMSVLRAGKVIDLSGTME*
Ga0157283_103296852	3300012907	Soil	SVDDIPVVSEENIEQIRNNLAGVPRGTPFKMNVLRAGKVLVLTGTTQGASR*
Ga0157310_102294481	3300012916	Soil	LSVDGIPVLSEDNIEKIRNTLAARAPGSSFKMSVLRAGKVIELTGTR*
Ga0137407_104917551	3300012930	Vadose Zone Soil	LSVEDIPVVSEENIEKIRNTLADVAPGTPVKMNVLRAGKVIELTGTSR*
Ga0137407_106991702	3300012930	Vadose Zone Soil	PVVSEENIEKIRNKLAGSAPGSRFKMIVLRAGKVLELTGTSQ*
Ga0126375_101023691	3300012948	Tropical Forest Soil	GDVILSVEGIPVVSEENIEKIRNKLAGLPPGTPFKISVLRAGKLIELAGVAQ*
Ga0126375_112096773	3300012948	Tropical Forest Soil	SEENIEKIRNKLAGAPPGTPFKVSVLRAGKIIELTGTSQ*
Ga0126375_117757471	3300012948	Tropical Forest Soil	EKVRTTLAAAPPGSPFKMTVLRGGKVIELTGTAQ*
Ga0134076_101092991	3300012976	Grasslands Soil	EKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ*
Ga0075351_10261403	3300014318	Natural And Restored Wetlands	AGGDIILSVDGIPLVSEDHIEQVRNRLAAAPPGTPFKMSVLRGGKLIELAGTAP*
Ga0157379_115094981	3300014968	Switchgrass Rhizosphere	QGIPIVSEENIEKVRNTLAEVAPGTPIRMHVLRGGKIIELTGTAQ*
Ga0132258_110596691	3300015371	Arabidopsis Rhizosphere	SVDGIPVMSEDNIEKIRNRLVDMPLGTPFKMNVLRTGKIIELTGTTQ*
Ga0132257_1038871582	3300015373	Arabidopsis Rhizosphere	GGDIILSVDDIPVVSEESIEKIRNKLAAPRSTIKMSVLRAGKVIELAGTNQ*
Ga0132255_1008625183	3300015374	Arabidopsis Rhizosphere	IDDIPVVSEDNIEQIRNKLAGVPRGTPFKMNVLRAGKVLVLTGTTQGASR*
Ga0182033_118162392	3300016319	Soil	VSEDNIEKIRNTLVGVPPGGSFTMKVLRAGKVIELTGKAQ
Ga0182038_119799151	3300016445	Soil	GDIILSVDGIPVTSEDNIEKIRTRLASAPLGTPFKMNVLRAGKVIELTGTSQ
Ga0187775_101632741	3300017939	Tropical Peatland	NIEKIRNTLAAVPVGKPFKVSVLRAGKLIELTGTAE
Ga0184639_106535691	3300018082	Groundwater Sediment	NIEKIRNRLAAEPPGSTFKMKVLRAGKVIELTGRTQ
Ga0190270_127342372	3300018469	Soil	VVSEENIEKIRNRLAGGAPGTPFKMSVLRAGRVIDLTGQLQ
Ga0193711_10299851	3300019997	Soil	KEVALGGDIILSVEDIPVVSEDDIEQIRNRLAGGAPGAPFKLSVLRAGKILELTGTSR
Ga0187768_10147193	3300020150	Tropical Peatland	LGGDIILSVDGIPVRSEDDIEKVRVKLATTPTGTPFKMSVLRAGKIVELTGTSP
Ga0179594_103104531	3300020170	Vadose Zone Soil	DNIEKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ
Ga0210384_100621444	3300021432	Soil	DIILSVEDIPVVSEENIEKIRNVLAGLAPGAAFKMSVLRAGKIIELTGTSH
Ga0126371_108872742	3300021560	Tropical Forest Soil	SEDNIEKIRAKLASPPLGSPFKVTVLRAGKVVELTGTTP
Ga0207684_100047372	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSEENIEKVRNTLATLASVAPGAAVKMNVLRAGKIIELTGTSR
Ga0207684_109129502	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	IALGGDIILSVDGIPVVSEDNIEQIRNRLAGVPRGTPFKMEVLRAGKIIMLTGTTQGAK
Ga0207646_102658173	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EENIEKIRNQPADAAPGTPFKMSVLRAGKVIELTGTTQ
Ga0207641_125241341	3300026088	Switchgrass Rhizosphere	GKEIPVGGDIILSDQGIPIVSEENIEKVRNTLAEVAPGTPIRMHVLRGGKIIELTGTAQ
Ga0207648_111065683	3300026089	Miscanthus Rhizosphere	PVVSEANIEKIRNRLAGVAPGASFKMTVLRSGKIIVLTGTSD
Ga0209235_10160031	3300026296	Grasslands Soil	REMALGGDIILSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMSVLRAGKVIELTGTTQ
Ga0209761_12706171	3300026313	Grasslands Soil	EDNIEKIRNRLASAPLGTPFKMSVLRAGKVIELTGTPQ
Ga0257152_10014044	3300026369	Soil	GDIILSVDGIPVVSEDNIEQIRNRLASGAPGAPFKMSVLRAGKVIDLSGTME
Ga0257169_10576782	3300026469	Soil	VDGIPVVSEDNIEQIRNRLASGAPGAPFKMSVLRAGKVIDLSGTME
Ga0257158_10049304	3300026515	Soil	EDISVVSEENIEKIRNMLAGLATGAPFKMSVLRAGKVIELTGTSQ
Ga0209690_11519932	3300026524	Soil	VDGIPVVSEDNIEKIRNRLAVAPPGTPFKMNVLRAGKVIELTGTTQ
Ga0209058_13220682	3300026536	Soil	VDGIPVVSEDNIEKIRNRLASAPLGTPFKMSVLRAGKVIELTGTPQ
Ga0209156_101198572	3300026547	Soil	LGGDIILSVDGIPVVSEDNIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTTQ
Ga0209996_10040422	3300027395	Arabidopsis Thaliana Rhizosphere	PVGGDIILSVEDIPVVSEENIEKIRNTLAAVTPGAPFKMNVLRAGKVIELTGTSQ
Ga0210002_10316792	3300027617	Arabidopsis Thaliana Rhizosphere	SEENIEKIRNTLAARTPGSSFKMSVLRAGKVIELTGTR
Ga0209588_11941331	3300027671	Vadose Zone Soil	GIPVVSEDNIEQIRNRLASGAPGAPFKMSVLRADKVIDLSGTME
Ga0209180_102252763	3300027846	Vadose Zone Soil	IPVVSEDNIERIRNTLVGVAPGAPFKMNVLRAGKVIELTGTSQ
Ga0209180_107979581	3300027846	Vadose Zone Soil	IEKIRNRLAGAPPGAPFKMSVLRAGRIIELTSTTQ
Ga0207428_100569396	3300027907	Populus Rhizosphere	SESNIEKIRNRLAGVAPGASFKMSVLRAGKVIQLTGTSD
Ga0268264_119638821	3300028381	Switchgrass Rhizosphere	NIEQIRNKLAGVPRGTPFKMNVLRAGKVLVLTGTTQGASR
Ga0299907_107911302	3300030006	Soil	VSEDNIEKIRNRLAGAAPGAPFKMNVLLAGRVIELTGTSQ
Ga0318555_101656771	3300031640	Soil	IEKIRNKLASVPAGTPFKISVLRGGKVIELAGKTKGELVKF
Ga0318561_104796782	3300031679	Soil	ILSVDGIPVTSEDNIEKIRTRLASAPLGTPFKMNVLRAGKVIELTGTSQ
Ga0307469_100802521	3300031720	Hardwood Forest Soil	NIEKVRNTLARLASVAPGAAVKMNVLRAGKIIELTGTSR
Ga0307469_102613501	3300031720	Hardwood Forest Soil	DIILSVEGIPVVSEDNIEKIRNTLVGMAPGAPFKMNVLRAGKVIELTGTSQ
Ga0307469_106123211	3300031720	Hardwood Forest Soil	IPVVSEENIEKIRNKLAGAAKGAMFKMSVLRAGKIIELAGTSQ
Ga0307469_118799861	3300031720	Hardwood Forest Soil	LSVEDIPVVSEENIEKIRNVLAGLAPGAAFKMSVLRAGKIIELTGTSH
Ga0307468_1010720311	3300031740	Hardwood Forest Soil	EDIPVVSEENIEKIRNKLVGSAPGSTFKMVVLRAGKVLELTGTSQ
Ga0318535_100972542	3300031764	Soil	IILSVDGIPVVSEDNIEKIRNKLASVPAGTPFKISVLRGGKVIELAGKTKGELVKF
Ga0318521_104303252	3300031770	Soil	SEDNIEKIRNKLASVPAGTPFKISVLRGGKVIELAGKTKGELVKF
Ga0318547_100433561	3300031781	Soil	IRNKLASVPAGTPFKISVLRGGKVIELAGKTKGELVKF
Ga0318547_104449291	3300031781	Soil	VEDIPVVSEDNIEKIRNTLVGVPPGGSFTMKVLRAGKVIELTGKAQ
Ga0307473_108140341	3300031820	Hardwood Forest Soil	PVVSEDNIEKIRTKLASMPAGAVFKMSVLRAGKILELSGTSQ
Ga0310893_103274132	3300031892	Soil	IEKIRNRLVGVAPGATFKMNVLRGGKVIELTGTSQ
Ga0307470_101815453	3300032174	Hardwood Forest Soil	AGGDVILSVDGIPVVSEDSIEQVRNRLAAAPSGTPFRMSVLRSGKVVDLTGTAP
Ga0307470_103232793	3300032174	Hardwood Forest Soil	LSVDDIPVVSEENIEKIRNRLAGATPGARFKMSVLRAGKVIELTGPSQ
Ga0307470_115355211	3300032174	Hardwood Forest Soil	GDIILSVEGIPVVSEDNIEKVRNTLVGVAPGAPFKMSVLRAGKVIELTGTSQ
Ga0307471_1003130613	3300032180	Hardwood Forest Soil	GDIILSVEEIPVVSEENIEKIRNKLAGSAPGSTFKMIVLRAGKVLELTGTSQ
Ga0307471_1012865491	3300032180	Hardwood Forest Soil	NIEKIRNRLAGAPLGTPFKMNVLRAGKVIELTGTAQ
Ga0307471_1043316911	3300032180	Hardwood Forest Soil	EDNIEKIRNVLVGKAPGASFKMSVLRAGKVIELTGTSQ
Ga0307472_1007846153	3300032205	Hardwood Forest Soil	EDNIEKIRNRLASVPAGTSFKIIVLRGGKVIELAGKTKGEVVKF
Ga0315275_101812294	3300032401	Sediment	ILSVDGIPVVSEDNIEKIRNKLAGAPPGSSFKVSVLRAGKVIELSGKTFQ
Ga0335084_124312412	3300033004	Soil	IPVVSEDNIEKIRNTLASGPPGGSFKMSVLRAGKVLELTGTAE
Ga0326731_10583741	3300033502	Peat Soil	LAVDDIPVVSEENIEKIRNRLAGLAPGATVKMSVLRAGKVLELTGKNQ
Ga0364925_0327615_430_573	3300034147	Sediment	GAAGIPVLSEDHIEQIRNHLAGGAPGSPFKMSVLRAGKVIELTGVTQ

Hidden Markov Model


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