Metagenome / Metatranscriptome Family F059415

Basic Information
Family ID	F059415
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	93 residues
Representative Sequence	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Number of Associated Samples	112
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.77 %
% of genes near scaffold ends (potentially truncated)	34.33 %
% of genes from short scaffolds (< 2000 bps)	85.07 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (80.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.672 % of family members)
Environment Ontology (ENVO)	Unclassified (33.582 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.284 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 69.07% β-sheet: 0.00% Coil/Unstructured: 30.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF07859	Abhydrolase_3	33.58
PF14534	DUF4440	13.43
PF13505	OMP_b-brl	2.24
PF05988	DUF899	2.24
PF16868	NMT1_3	2.24
PF01557	FAA_hydrolase	1.49
PF00005	ABC_tran	1.49
PF10340	Say1_Mug180	0.75
PF13670	PepSY_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	33.58
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.24

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.60 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.85 %
Unclassified	root	N/A	19.40 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.37 %
Unclassified	root	N/A	19.40 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.49 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.40 %
Unclassified	root	N/A	19.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.48 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.49 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.48 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.49 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.48 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	1.49 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.48 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.49 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1027368	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300004114\|Ga0062593_100430368	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300004633\|Ga0066395_10485655	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300005328\|Ga0070676_10558264	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005332\|Ga0066388_100937089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1439	Open in IMG/M
3300005332\|Ga0066388_101281277	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005332\|Ga0066388_102420625	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005337\|Ga0070682_100718999	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005339\|Ga0070660_100404190	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005344\|Ga0070661_100250799	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005345\|Ga0070692_10319301	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005355\|Ga0070671_100756931	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005364\|Ga0070673_100167749	Not Available	1872	Open in IMG/M
3300005434\|Ga0070709_10684750	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005435\|Ga0070714_101836822	Not Available	592	Open in IMG/M
3300005436\|Ga0070713_100050636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3432	Open in IMG/M
3300005436\|Ga0070713_100266372	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300005439\|Ga0070711_100019457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4356	Open in IMG/M
3300005440\|Ga0070705_100099771	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300005441\|Ga0070700_100911092	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005445\|Ga0070708_101682928	Not Available	590	Open in IMG/M
3300005457\|Ga0070662_100202062	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300005457\|Ga0070662_100538927	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005544\|Ga0070686_101503130	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005548\|Ga0070665_101001830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	848	Open in IMG/M
3300005578\|Ga0068854_101188814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	683	Open in IMG/M
3300005713\|Ga0066905_101072414	Not Available	714	Open in IMG/M
3300005718\|Ga0068866_11318939	Not Available	525	Open in IMG/M
3300005719\|Ga0068861_102247625	Not Available	547	Open in IMG/M
3300005764\|Ga0066903_100130684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3530	Open in IMG/M
3300005842\|Ga0068858_102197649	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006163\|Ga0070715_10053136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1750	Open in IMG/M
3300006172\|Ga0075018_10245823	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300006358\|Ga0068871_101341167	Not Available	673	Open in IMG/M
3300006573\|Ga0074055_11405646	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006579\|Ga0074054_11824777	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300006580\|Ga0074049_12081812	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006904\|Ga0075424_100226588	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300006954\|Ga0079219_10503755	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300009098\|Ga0105245_12260740	Not Available	597	Open in IMG/M
3300009101\|Ga0105247_10401210	Not Available	977	Open in IMG/M
3300009101\|Ga0105247_10846662	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009177\|Ga0105248_10623888	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300010043\|Ga0126380_10001805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8272	Open in IMG/M
3300010043\|Ga0126380_10135016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300010043\|Ga0126380_11569926	Not Available	586	Open in IMG/M
3300010046\|Ga0126384_10456332	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300010046\|Ga0126384_11305855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	673	Open in IMG/M
3300010359\|Ga0126376_10868382	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010359\|Ga0126376_11617567	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010359\|Ga0126376_11873310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	639	Open in IMG/M
3300010360\|Ga0126372_12776885	Not Available	542	Open in IMG/M
3300010361\|Ga0126378_11168660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300010362\|Ga0126377_10328727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1518	Open in IMG/M
3300010366\|Ga0126379_10953715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300010371\|Ga0134125_11479684	Not Available	740	Open in IMG/M
3300010396\|Ga0134126_11756894	Not Available	680	Open in IMG/M
3300010398\|Ga0126383_10010728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6649	Open in IMG/M
3300010401\|Ga0134121_11369298	Not Available	716	Open in IMG/M
3300010401\|Ga0134121_11903984	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012951\|Ga0164300_10099192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1275	Open in IMG/M
3300012960\|Ga0164301_10443325	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300012960\|Ga0164301_11399946	Not Available	571	Open in IMG/M
3300012961\|Ga0164302_10047122	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300012971\|Ga0126369_11318548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	812	Open in IMG/M
3300012971\|Ga0126369_11945441	Not Available	676	Open in IMG/M
3300012985\|Ga0164308_10097970	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300012985\|Ga0164308_10590521	Not Available	943	Open in IMG/M
3300012986\|Ga0164304_10043097	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300012986\|Ga0164304_10624647	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012986\|Ga0164304_10880475	Not Available	699	Open in IMG/M
3300012989\|Ga0164305_10248051	Not Available	1284	Open in IMG/M
3300012989\|Ga0164305_11007398	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300013102\|Ga0157371_10479861	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300013296\|Ga0157374_12168764	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300015371\|Ga0132258_10111609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6474	Open in IMG/M
3300015371\|Ga0132258_11348253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1803	Open in IMG/M
3300015372\|Ga0132256_103465070	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300015374\|Ga0132255_101496499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300016445\|Ga0182038_10419726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300017947\|Ga0187785_10353268	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300017974\|Ga0187777_10181677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1413	Open in IMG/M
3300018060\|Ga0187765_10138379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1363	Open in IMG/M
3300019879\|Ga0193723_1072093	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300021478\|Ga0210402_11045492	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300021560\|Ga0126371_10042829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4298	Open in IMG/M
3300025899\|Ga0207642_10604780	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025905\|Ga0207685_10007300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3071	Open in IMG/M
3300025906\|Ga0207699_10606512	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300025911\|Ga0207654_10648528	Not Available	756	Open in IMG/M
3300025916\|Ga0207663_10140271	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300025916\|Ga0207663_11198244	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025917\|Ga0207660_10250597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1397	Open in IMG/M
3300025927\|Ga0207687_10407165	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300025928\|Ga0207700_10354757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1278	Open in IMG/M
3300025928\|Ga0207700_11379584	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300025929\|Ga0207664_10117567	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300025931\|Ga0207644_10348962	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300025937\|Ga0207669_10497557	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300025938\|Ga0207704_11707923	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300025941\|Ga0207711_10534213	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300025960\|Ga0207651_10118488	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300025986\|Ga0207658_10663888	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300026075\|Ga0207708_10620358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	918	Open in IMG/M
3300026088\|Ga0207641_10693036	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300026089\|Ga0207648_10538958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1071	Open in IMG/M
3300026121\|Ga0207683_11313993	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300026494\|Ga0257159_1039653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	793	Open in IMG/M
3300027775\|Ga0209177_10055982	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300027874\|Ga0209465_10181912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300028379\|Ga0268266_10394284	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300028802\|Ga0307503_10582696	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031057\|Ga0170834_108578009	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031170\|Ga0307498_10341104	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031184\|Ga0307499_10003310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3647	Open in IMG/M
3300031184\|Ga0307499_10057538	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300031199\|Ga0307495_10072224	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031226\|Ga0307497_10107923	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031231\|Ga0170824_103725634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8147	Open in IMG/M
3300031455\|Ga0307505_10032996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2337	Open in IMG/M
3300031469\|Ga0170819_11667824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	908	Open in IMG/M
3300031545\|Ga0318541_10532080	Not Available	658	Open in IMG/M
3300031716\|Ga0310813_11180504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	704	Open in IMG/M
3300031740\|Ga0307468_100132830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1560	Open in IMG/M
3300031819\|Ga0318568_10702995	Not Available	628	Open in IMG/M
3300031820\|Ga0307473_10238247	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300031833\|Ga0310917_10742136	Not Available	664	Open in IMG/M
3300031892\|Ga0310893_10393335	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300032174\|Ga0307470_10041612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2281	Open in IMG/M
3300032180\|Ga0307471_100333422	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300032180\|Ga0307471_103280720	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.39%
Host-Associated	Host-Associated	27.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.64%
Plants	Host-Associated → Plants	27.61%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.96%
Sediment	Environmental → Aquatic → Sediment	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.51%
Loam	Environmental → Terrestrial → Soil → Loam	20.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01278120	2199352025	Soil	HFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
AF_2010_repII_A01DRAFT_10273682	3300000580	Forest Soil	MFLSSVAQAAPPEFNTEHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0062593_1004303682	3300004114	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARAQ*
Ga0066395_104856552	3300004633	Tropical Forest Soil	MFLSSVAQAAPPEFNTEHFCDDFVEKRGGAGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0070676_105582641	3300005328	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0066388_1009370892	3300005332	Tropical Forest Soil	MTRIVVAILTLMACGSAQAAAPEFNTEHFCGDFAEKNGGDSMGGMAKAVCLLSEQSTKTIVDKAWDHVSAANQATCLKAAKDSYVYLAKCLSEAPGQ*
Ga0066388_1012812772	3300005332	Tropical Forest Soil	MTRILIFAIAMFLSSVAQAAPPEFNTEHFCDDFVEKRGGAGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0066388_1024206252	3300005332	Tropical Forest Soil	MTRILIVAMAAVLSGGAQAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWNHVSAGSRDACLKAAGESYVSLAKCLGEVPGQ*
Ga0070682_1007189991	3300005337	Corn Rhizosphere	MVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAR
Ga0070660_1004041901	3300005339	Corn Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKA
Ga0070661_1002507992	3300005344	Corn Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0070692_103193011	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ*
Ga0070671_1007569312	3300005355	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARAQ*
Ga0070673_1001677492	3300005364	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0070709_106847501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ*
Ga0070714_1018368221	3300005435	Agricultural Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAG
Ga0070713_1000506365	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRISIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ*
Ga0070713_1002663722	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0070711_1000194575	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTRIVFFTLAIFMCTGAQAAVPEFNTDHFCADFAEKRGDSMGGIAKSICLLSEQSTKAVVDKAWDHVPADGKTTCLKASGESYVSLAQCLQALPAQ*
Ga0070705_1000997711	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAK
Ga0070700_1009110922	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0070708_1016829281	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLNEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0070662_1002020622	3300005457	Corn Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0070662_1005389271	3300005457	Corn Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0070686_1015031302	3300005544	Switchgrass Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQ
Ga0070665_1010018302	3300005548	Switchgrass Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0068854_1011888142	3300005578	Corn Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARAQ*
Ga0066905_1010724141	3300005713	Tropical Forest Soil	MTRILIIAMAAVLSGGAQAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWNHVSAGSRDACLKAAGESYVSLAKCLGEVPGQ*
Ga0068866_113189391	3300005718	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0068861_1022476252	3300005719	Switchgrass Rhizosphere	MTRISIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0066903_1001306842	3300005764	Tropical Forest Soil	MARFFLVIFAIVLSSGAQAAAPEFNTEHFCSDFADKRGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0068858_1021976491	3300005842	Switchgrass Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVS
Ga0070715_100531363	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTRISIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ*
Ga0075018_102458231	3300006172	Watersheds	MTRTLIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGE
Ga0068871_1013411672	3300006358	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAA
Ga0074055_114056461	3300006573	Soil	GARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRENCLKAAGESYVSLAKCLGEAQGQ*
Ga0074054_118247772	3300006579	Soil	MTRILIAAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWNHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ*
Ga0074049_120818121	3300006580	Soil	VLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ*
Ga0074064_112366001	3300006603	Soil	AAHAAAPEFNTDHFCGDFAQTLGGGNMGDIAKAVCLLSEESTKEVVDKAWDHISADARTSCLKVAGDSYISLAQCLNTLPGR*
Ga0075424_1002265881	3300006904	Populus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0079219_105037552	3300006954	Agricultural Soil	MTRILFFTLTILLSAGAQAAVPEFNTDHFCADFAEKRGDSMGGIAKSICMLSEQSTKAVVDKAWDHVSADGKTTCLKASGESYVSLAECLQTLPAQ*
Ga0105245_122607402	3300009098	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSL
Ga0105247_104012101	3300009101	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDLVSAGSKETCLKAAGESYVSLAKCLGEA
Ga0105247_108466622	3300009101	Switchgrass Rhizosphere	MTSILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0105248_106238882	3300009177	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0126380_100018052	3300010043	Tropical Forest Soil	MARFFLVIFAIVLSSGAQAAAPEFNTEHFCGDFADKHGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0126380_101350162	3300010043	Tropical Forest Soil	MFLSSVAQAAPPEFNTEHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRERCVEVASGSYVSLAKCLGGLPER*
Ga0126380_115699262	3300010043	Tropical Forest Soil	LKQFFVTRRNGFKDQAAIEVAMTRVLIIAMAIVLSGSAQAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0126384_104563321	3300010046	Tropical Forest Soil	MTRILIIAMAIVLSGSALAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVEKAWDHVAAGSRDTCLKAAGE
Ga0126384_113058551	3300010046	Tropical Forest Soil	MWRNGFKGHCLIEKSMTRILIFAIAMFLSSVAQAAPPEFNTEHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0126376_108683821	3300010359	Tropical Forest Soil	MTRTLIIVMAIVLSGSAQAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCLLSEQSTKTVVEKAWDHVSAGSRDTCLKAAGESYVSLAKCLGEAPGQ*
Ga0126376_116175671	3300010359	Tropical Forest Soil	MQFRHGIETAGVVMSGGMTRIVVAILTLMACGSAQAAAPEFNTEHFCGDFAEKNGGDSMGGMAKAVCLLSEQSTKTIVDKAWDHVSAANQATCLKA
Ga0126376_118733102	3300010359	Tropical Forest Soil	MWRNGFKGHCLIEKSMTRILIFATAMFLSSVAQAAPPEFNTEHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0126372_127768852	3300010360	Tropical Forest Soil	MTRILIFATAMFLSSVAQAAPPEFNTEHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0126378_111686602	3300010361	Tropical Forest Soil	SSGAQAAAPEFNTEHFCGDFADKHGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0126377_103287272	3300010362	Tropical Forest Soil	MTRILIIAMAIVLSGSALAAAPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVEKAWDHVSAGSRDTCLKAAGESYVSLAKCLGEAPGQ*
Ga0126379_109537152	3300010366	Tropical Forest Soil	MDAGMKHLAIIVLTTILCGVAQAAVPEFDTEHFCSEFANKGGGDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKAASESYVRLAKCLSEVPGR*
Ga0134125_114796841	3300010371	Terrestrial Soil	TLAIFMCTGAQAAVPKFNTDHFCADFAEKRGDSMGGIAKSICLLSEQSTKAVVDKAWDHVPADGKTTCLKASGESYVSLAQCLQALPAQ*
Ga0134126_117568942	3300010396	Terrestrial Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAG
Ga0126383_100107288	3300010398	Tropical Forest Soil	MARFFLVIFAIVLYSGAQAAAPEFNTEHFCSDFADKRGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0134121_113692981	3300010401	Terrestrial Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKA
Ga0134121_119039842	3300010401	Terrestrial Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0164300_100991922	3300012951	Soil	MTRILIVDITIVLSGGARDAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLREQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0164301_104433252	3300012960	Soil	AAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0164301_113999461	3300012960	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSL
Ga0164302_100471221	3300012961	Soil	IVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0126369_113185482	3300012971	Tropical Forest Soil	MWRNGFKGHCLIEKSMTRILIFAIAMFLSSVAQAAPPEFNTGHFCDDFVEKRGGDGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER*
Ga0126369_119454411	3300012971	Tropical Forest Soil	MDAGMKHLAIIVLTTILCGVAQAAVPEFDTEHFCSEFANKGGGDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKAASESYVRLAKCLS
Ga0164308_100979703	3300012985	Soil	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGETQGQ*
Ga0164308_105905213	3300012985	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAASESYVSLAKCLGEARGQ*
Ga0164304_100430972	3300012986	Soil	MTRILIVAIAIVLCGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0164304_106246472	3300012986	Soil	MTRIVFFTLAILWSAGAQAAVPEFNTDHFCADFAEKRGDSMGGIAKSICLLSEQSTKAVVDKAWDHVPADGKTTCLKASGESYVSLAQCLQALPAQ*
Ga0164304_108804752	3300012986	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAERRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0164307_113206772	3300012987	Soil	FCADFAEKRGDSMGGIAKSICLLSEQSTKAVVDKAWDHVPADGKTTCLKASGESYVSLAQCLQALPAQ*
Ga0164305_102480511	3300012989	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVS
Ga0164305_110073981	3300012989	Soil	PEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0157371_104798611	3300013102	Corn Rhizosphere	FNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ*
Ga0157374_121687641	3300013296	Miscanthus Rhizosphere	AVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ*
Ga0132258_101116097	3300015371	Arabidopsis Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ*
Ga0132258_113482532	3300015371	Arabidopsis Rhizosphere	MMRLLIVAIAIVLSSGAQAAAPEFNTEHFCSDFAEKGGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRETCLKAAGESYVKLAQCLGSVTGQ*
Ga0132256_1034650701	3300015372	Arabidopsis Rhizosphere	MMRLLIVTIAIVLSSGAQAAAPEFNTEHFCSDFAEKGGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRETCLKAAGESYVKLAQCLGSVT
Ga0132255_1014964992	3300015374	Arabidopsis Rhizosphere	MMRLLIVTIAIVLSSGAQAAAPEFNTEHFCSDFADKGGGDNMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRETCLKAAGESYGKLAQCLGSVTGQ*
Ga0182038_104197262	3300016445	Soil	MDAGMKHLAIIVLTAILCGVARAAVPEFDTEHFCSEFANKGGGDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKTASESYVRLAKCLSEAPGR
Ga0187785_103532681	3300017947	Tropical Peatland	MARFFLVIFAIVLSSGAQAAAPEFNTEHFCSDFADKRGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQC
Ga0187777_101816772	3300017974	Tropical Peatland	MVRLLIVAIAIVLSSGAQAAAPEFNTEHFCVDFADKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRENCLKAAGESYVKLAQCLGSVMGQ
Ga0187765_101383792	3300018060	Tropical Peatland	MVRLLIVAIAIVLSSGAQAAAPEFNTEHFCVDFADKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSADGRENCLKAAGESYVRLAQCLGSVMGQ
Ga0193723_10720932	3300019879	Soil	LSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0210402_110454921	3300021478	Soil	MTRILIVAIAIILSGGARAAVPEFNTEHFCGDFAEKRGGDSLGGIAKAVCILSEQSTKTVVDKAWNHVTAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0126371_100428293	3300021560	Tropical Forest Soil	MARFFLVIFAIVLSSGAQAAAPEFNTEHFCSDFADKRGGDTMGGIAKAVCILSEQSTKTVVDKAWNHVSTDGRETCLKAAGESYVKLAQCLGSVTGQ
Ga0207642_106047802	3300025899	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207685_100073004	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLG
Ga0207699_106065122	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ
Ga0207654_106485282	3300025911	Corn Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAK
Ga0207663_101402712	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0207663_111982441	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ
Ga0207660_102505972	3300025917	Corn Rhizosphere	MVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ
Ga0207687_104071652	3300025927	Miscanthus Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ
Ga0207700_103547571	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRISIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207700_113795842	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ
Ga0207664_101175673	3300025929	Agricultural Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ
Ga0207644_103489622	3300025931	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARAQ
Ga0207669_104975572	3300025937	Miscanthus Rhizosphere	MVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207704_117079231	3300025938	Miscanthus Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLG
Ga0207711_105342131	3300025941	Switchgrass Rhizosphere	EFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207651_101184883	3300025960	Switchgrass Rhizosphere	MTRILIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKMVVDKAWDHVSAGSKETCLKAAGESYVSLAKCLGEARAQ
Ga0207658_106638882	3300025986	Switchgrass Rhizosphere	LIVAIAIVLSGGARAAVPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207708_106203582	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0207641_106930362	3300026088	Switchgrass Rhizosphere	VPEFNTEHFCDDFAEKRGGDSMGGIAKAVCVLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207648_105389582	3300026089	Miscanthus Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEARGQ
Ga0207683_113139931	3300026121	Miscanthus Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGE
Ga0257159_10396532	3300026494	Soil	MTRILMVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0209177_100559821	3300027775	Agricultural Soil	MTRILFFTLTILLSAGAQAAVPEFNTDHFCADFAEKRGDSMGGIAKSICMLSEQSTKAVVDKAWDHVSADGKTTCLKASGESYVSLAECLQTLPAQ
Ga0209465_101819121	3300027874	Tropical Forest Soil	MFLSSVAQAAPPEFNTEHFCDDFVEKRGGAGMGGLAKAVCILSEQSTKTIVDKAWDHVSAGGRETCVEVASGSYVSLAKCLGGLPER
Ga0268266_103942842	3300028379	Switchgrass Rhizosphere	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ
Ga0307503_105826961	3300028802	Soil	AAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0170834_1085780091	3300031057	Forest Soil	VPPEFNTEHFCGDFAEKRDGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307498_103411042	3300031170	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVS
Ga0307499_100033102	3300031184	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRENCLKAAGESYVSLAKCLGEAQGQ
Ga0307499_100575382	3300031184	Soil	AAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCMLSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307495_100722242	3300031199	Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307497_101079232	3300031226	Soil	RRAIEAPMTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0170824_10372563412	3300031231	Forest Soil	MTRTLIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307505_100329964	3300031455	Soil	ILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRENCLKAAGESYVSLAKCLGEAQGQ
Ga0170819_116678242	3300031469	Forest Soil	MTRTLIVATAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0318541_105320801	3300031545	Soil	MDAGMKHLAIIVLTTILCGVARAAVPEFDTEHFCSEFANKGGGDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKTASESYVRLAKCLSEAPGR
Ga0310813_111805042	3300031716	Soil	MTRILMVAITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307468_1001328302	3300031740	Hardwood Forest Soil	MTRISIVAIAIVLSGGARAAVPEFNTEHSCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0318568_107029952	3300031819	Soil	MSHCMDAGMKHLAIIVLTTILCGVARAAVPEFDTEHFCSEFANKGGGDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKTASESYVRLAKCLSEAPGR
Ga0307473_102382472	3300031820	Hardwood Forest Soil	AVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ
Ga0310917_107421362	3300031833	Soil	MDAGMKHLAIIVLTTILCGVARAAVPEFDTEHFCREFANKGGDDSTGGIAKAVCVLSEQSTKTVVDKAWSHASAESKDSCVKTASESYVRLAKCLSEAPGR
Ga0310893_103933352	3300031892	Soil	ITIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWGHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307470_100416124	3300032174	Hardwood Forest Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETQGQ
Ga0307471_1003334221	3300032180	Hardwood Forest Soil	MTRILIVAIAIVLSGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIAKAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGEAQGQ
Ga0307471_1032807202	3300032180	Hardwood Forest Soil	MTRILIVAIAIVLCGGARAAVPEFNTEHFCGDFAEKRGGDSMGGIARAVCILSEQSTKTVVDKAWDHVSAGSRETCLKAAGESYVSLAKCLGETRGQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059415

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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