Metagenome / Metatranscriptome Family F053283

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053283
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	77 residues
Representative Sequence	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR
Number of Associated Samples	119
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.86 %
% of genes near scaffold ends (potentially truncated)	43.97 %
% of genes from short scaffolds (< 2000 bps)	87.23 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.163 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.603 % of family members)
Environment Ontology (ENVO)	Unclassified (40.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.62% β-sheet: 0.00% Coil/Unstructured: 52.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02673	BacA	10.64
PF00156	Pribosyltran	9.93
PF13240	zinc_ribbon_2	1.42
PF00376	MerR	0.71
PF00498	FHA	0.71
PF13464	DUF4115	0.71
PF03129	HGTP_anticodon	0.71
PF13248	zf-ribbon_3	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	10.64
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.71
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.71
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.71
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.71

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.16 %
Unclassified	root	N/A	2.84 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.49 %
Unclassified	root	N/A	2.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.49 %
Unclassified	root	N/A	2.84 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.55 %
Unclassified	root	N/A	2.84 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.79 %
Unclassified	root	N/A	2.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.13 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.42 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.79 %
Unclassified	root	N/A	2.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.13 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.71 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.79 %
Unclassified	root	N/A	2.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.13 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.71 %
Janibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.79 %
Unclassified	root	N/A	2.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.13 %
Janibacter terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae	0.71 %
Cellulomonas composti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas composti	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402HKXIX	Not Available	512	Open in IMG/M
2228664021\|ICCgaii200_c0792274	Not Available	547	Open in IMG/M
3300003987\|Ga0055471_10246950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300004156\|Ga0062589_102432866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300004480\|Ga0062592_101249615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300004801\|Ga0058860_11970569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300005327\|Ga0070658_10073865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2797	Open in IMG/M
3300005327\|Ga0070658_10935411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300005328\|Ga0070676_10153986	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300005328\|Ga0070676_10290022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300005329\|Ga0070683_100281002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1583	Open in IMG/M
3300005329\|Ga0070683_101141778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300005329\|Ga0070683_102445096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005330\|Ga0070690_101168908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300005334\|Ga0068869_100560933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300005334\|Ga0068869_100981514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300005334\|Ga0068869_101238784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005336\|Ga0070680_100511774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300005337\|Ga0070682_101433564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300005339\|Ga0070660_101220425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300005344\|Ga0070661_100175973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1626	Open in IMG/M
3300005344\|Ga0070661_100344226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300005353\|Ga0070669_101132181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300005353\|Ga0070669_101547981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300005364\|Ga0070673_101167835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300005366\|Ga0070659_100923781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300005438\|Ga0070701_10007675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4626	Open in IMG/M
3300005444\|Ga0070694_100481738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300005466\|Ga0070685_11020114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300005530\|Ga0070679_100398766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300005535\|Ga0070684_100040062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4032	Open in IMG/M
3300005535\|Ga0070684_101162899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300005535\|Ga0070684_101446072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300005536\|Ga0070697_101040256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300005548\|Ga0070665_101406149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300005564\|Ga0070664_101042106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300005614\|Ga0068856_100370605	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1451	Open in IMG/M
3300005719\|Ga0068861_100064152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2825	Open in IMG/M
3300005719\|Ga0068861_101055566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300005842\|Ga0068858_100766203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300006573\|Ga0074055_11762872	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300006580\|Ga0074049_13073865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300006581\|Ga0074048_12772775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300006854\|Ga0075425_101196246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300006871\|Ga0075434_101588890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300009011\|Ga0105251_10415868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300009156\|Ga0111538_11932012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300009156\|Ga0111538_13369918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300009174\|Ga0105241_10572652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300009545\|Ga0105237_11407547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300009868\|Ga0130016_10000094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	193899	Open in IMG/M
3300009868\|Ga0130016_10639264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300009870\|Ga0131092_10002357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39942	Open in IMG/M
3300009873\|Ga0131077_10022805	All Organisms → cellular organisms → Bacteria	10551	Open in IMG/M
3300010371\|Ga0134125_11488176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300010399\|Ga0134127_10439529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1301	Open in IMG/M
3300010399\|Ga0134127_12316053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300010400\|Ga0134122_11894133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300010401\|Ga0134121_10290514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1444	Open in IMG/M
3300012513\|Ga0157326_1015371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300012515\|Ga0157338_1018957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300012882\|Ga0157304_1084498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300012892\|Ga0157294_10005741	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300012893\|Ga0157284_10102939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300012895\|Ga0157309_10006197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2286	Open in IMG/M
3300012898\|Ga0157293_10050886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300012901\|Ga0157288_10310580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300012905\|Ga0157296_10092689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas composti	809	Open in IMG/M
3300012908\|Ga0157286_10127832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300012909\|Ga0157290_10131037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300012911\|Ga0157301_10022106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300012911\|Ga0157301_10065245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300012912\|Ga0157306_10283601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300012943\|Ga0164241_10088535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2229	Open in IMG/M
3300012943\|Ga0164241_10545271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300012984\|Ga0164309_10975420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300012985\|Ga0164308_11143376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300012989\|Ga0164305_10028012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3048	Open in IMG/M
3300013096\|Ga0157307_1050495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300013105\|Ga0157369_10447627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1338	Open in IMG/M
3300013297\|Ga0157378_10211974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1837	Open in IMG/M
3300013306\|Ga0163162_10081352	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300013306\|Ga0163162_13066414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300014311\|Ga0075322_1169105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300014325\|Ga0163163_10602514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300014969\|Ga0157376_13017877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300015201\|Ga0173478_10247740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300015371\|Ga0132258_11026153	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300015371\|Ga0132258_13001816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300015371\|Ga0132258_13565949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300015372\|Ga0132256_102154335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300015373\|Ga0132257_101188947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300015374\|Ga0132255_103131089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300015374\|Ga0132255_104341682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300019356\|Ga0173481_10097757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300019361\|Ga0173482_10004505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3206	Open in IMG/M
3300019362\|Ga0173479_10000750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6546	Open in IMG/M
3300021445\|Ga0182009_10603967	Not Available	587	Open in IMG/M
3300022737\|Ga0247747_1022386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300022892\|Ga0247753_1033617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300023062\|Ga0247791_1058294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300023070\|Ga0247755_1016362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1351	Open in IMG/M
3300023071\|Ga0247752_1030962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300023269\|Ga0247773_1028329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M
3300024055\|Ga0247794_10178804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300025315\|Ga0207697_10239249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300025321\|Ga0207656_10494853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300025885\|Ga0207653_10024051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1943	Open in IMG/M
3300025893\|Ga0207682_10073514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300025899\|Ga0207642_11035429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300025899\|Ga0207642_11093938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae	515	Open in IMG/M
3300025907\|Ga0207645_10291063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300025911\|Ga0207654_11244061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300025914\|Ga0207671_11011635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300025917\|Ga0207660_10506034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300025920\|Ga0207649_10574062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300025921\|Ga0207652_11104558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300025924\|Ga0207694_10012672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6352	Open in IMG/M
3300025925\|Ga0207650_10827398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300025926\|Ga0207659_10498779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300025927\|Ga0207687_10404785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300025927\|Ga0207687_10967773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300025935\|Ga0207709_11441813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300025937\|Ga0207669_10210253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300025944\|Ga0207661_11523783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300025949\|Ga0207667_11856679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300026023\|Ga0207677_11808986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300026067\|Ga0207678_10328424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300026078\|Ga0207702_11861807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300026116\|Ga0207674_10414519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1301	Open in IMG/M
3300028380\|Ga0268265_12074214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300028597\|Ga0247820_11365949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300031854\|Ga0310904_10568850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300031858\|Ga0310892_10397321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300031913\|Ga0310891_10077465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300031938\|Ga0308175_100833709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300031996\|Ga0308176_10162696	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300032002\|Ga0307416_101354940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300032013\|Ga0310906_10530056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300034660\|Ga0314781_106439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.35%
Host-Associated	Host-Associated	46.81%
Engineered	Engineered	2.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.94%
Plants	Host-Associated → Plants	46.10%
Wastewater	Engineered → Wastewater	2.84%
Aquatic	Environmental → Aquatic	1.42%
Human	Host-Associated → Human	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.44%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.84%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.42%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Marine	Environmental → Aquatic → Marine	0.71%
Digestive System	Host-Associated → Human → Digestive System	0.71%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.18%
Loam	Environmental → Terrestrial → Soil → Loam	12.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.26%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.26%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.42%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_08417350	2070309009	Soil	MPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR
ICCgaii200_07922741	2228664021	Soil	MGEAPFPPGRDDAPMPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSLSGERR
Ga0055471_102469501	3300003987	Natural And Restored Wetlands	AGHLMGEAPFPPGRDDAPMPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSLSGERR*
Ga0062589_1024328662	3300004156	Soil	REAAGPLMGEAPFPPGRDDAPMPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSLSGERR*
Ga0062592_1012496153	3300004480	Soil	PGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0058860_119705691	3300004801	Host-Associated	NMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070658_100738652	3300005327	Corn Rhizosphere	MPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070658_109354112	3300005327	Corn Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070676_101539861	3300005328	Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELT
Ga0070676_102900222	3300005328	Miscanthus Rhizosphere	MGEAPFPPGRDDGATPSRPIFKSMKSAVESRAADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR*
Ga0070683_1002810023	3300005329	Corn Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070683_1011417781	3300005329	Corn Rhizosphere	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR*
Ga0070683_1024450962	3300005329	Corn Rhizosphere	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070690_1011689081	3300005330	Switchgrass Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPEL
Ga0068869_1005609332	3300005334	Miscanthus Rhizosphere	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0068869_1009815143	3300005334	Miscanthus Rhizosphere	PSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR*
Ga0068869_1012387841	3300005334	Miscanthus Rhizosphere	MKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0070680_1005117741	3300005336	Corn Rhizosphere	MKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070682_1014335642	3300005337	Corn Rhizosphere	MGEAPFPPGRDDGATPSRPIFKSMKSAVESRAADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070660_1012204253	3300005339	Corn Rhizosphere	RPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKLRLEEALGPELTRKLLTSLSSERR*
Ga0070661_1001759733	3300005344	Corn Rhizosphere	ALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070661_1003442262	3300005344	Corn Rhizosphere	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070669_1011321811	3300005353	Switchgrass Rhizosphere	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTS
Ga0070669_1015479811	3300005353	Switchgrass Rhizosphere	PIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070673_1011678353	3300005364	Switchgrass Rhizosphere	PFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070659_1009237813	3300005366	Corn Rhizosphere	ARLCVVRREAAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070701_100076756	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070694_1004817383	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070685_110201142	3300005466	Switchgrass Rhizosphere	MPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070679_1003987663	3300005530	Corn Rhizosphere	LMGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070684_1000400623	3300005535	Corn Rhizosphere	MPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDSRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070684_1011628991	3300005535	Corn Rhizosphere	MKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR*
Ga0070684_1014460722	3300005535	Corn Rhizosphere	AGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0070697_1010402562	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGEAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0070665_1014061492	3300005548	Switchgrass Rhizosphere	MGEAPFPPGRDDGATPSRPIFRNMKSAVESRVAHANARDLHLLLDCLALGKPDNRRTPAKLRLEEALGPELTRKLLTSLSSERR*
Ga0070664_1010421063	3300005564	Corn Rhizosphere	LMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0068856_1003706053	3300005614	Corn Rhizosphere	MGEAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0068861_1000641522	3300005719	Switchgrass Rhizosphere	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0068861_1010555663	3300005719	Switchgrass Rhizosphere	AAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0068858_1007662031	3300005842	Switchgrass Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTS
Ga0074055_117628724	3300006573	Soil	MGEAPFPPGRDDGTTPSRPIFKDMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0074049_130738652	3300006580	Soil	MGEAPFPPGRDDGTTPYRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0074048_127727751	3300006581	Soil	APFPPGRDDGTTPSRPIFKDMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0075425_1011962462	3300006854	Populus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR*
Ga0075434_1015888901	3300006871	Populus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKLRLEEALGPELTRKLLTSLSSERR*
Ga0105251_104158682	3300009011	Switchgrass Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0111538_119320121	3300009156	Populus Rhizosphere	KNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0111538_133699182	3300009156	Populus Rhizosphere	FQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR*
Ga0105104_103151962	3300009168	Freshwater Sediment	MANEMDSAVEPPPTDTRARDLHLLRDCLDLGRPRRRRPPAKVRLEEALGPDLARKLLRSLSTERR*
Ga0105241_105726522	3300009174	Corn Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0105237_114075472	3300009545	Corn Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0130016_1000009498	3300009868	Wastewater	MEAAVESTPADASARTLHLLRDCLALGRPDHGRAPAKVRLEETLGPELTRRLLSSLGATESG*
Ga0130016_106392642	3300009868	Wastewater	MGERPFPPGRDDLQVPDRPIFEGMESAVEFTPRASHARDLHVLRDCLALGRPDCRRPPAKVRLEEALGPELTQKLLVRLSGERR*
Ga0131092_1000235732	3300009870	Activated Sludge	MGEPSFTPRRDDLQPPRPPIFQSMRSAVESTPTEANARHLHVLRDCLALGKPDRRRAPAKVRLEEALGPELTEKLLARLSSEQR*
Ga0131077_100228051	3300009873	Wastewater	MGERPFTPGRDDPSAPRRPIFQSMESAVESTPRESNASDLHVLRDCLALGKPYRRRPPAKVRLEEALGPELTQKLLARLSGERR*
Ga0134125_114881764	3300010371	Terrestrial Soil	MPFRPIFQSMKAAVESRPADANARDLHRLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0134127_104395293	3300010399	Terrestrial Soil	PSRPIFKNMKSAVESRPADANARDLHLPLDCLALGQPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0134127_123160532	3300010399	Terrestrial Soil	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSE
Ga0134122_118941331	3300010400	Terrestrial Soil	RLCVVRREAAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0134121_102905143	3300010401	Terrestrial Soil	MPSRPIFKNMKSAVESRPADANARALHLLLDCLALGKPDNRRTPAKVRLEEALGPELTQKLLASLSGERR*
Ga0157326_10153711	3300012513	Arabidopsis Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0157338_10189572	3300012515	Arabidopsis Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0157304_10844981	3300012882	Soil	MGEAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0157294_100057412	3300012892	Soil	MPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRLPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157284_101029392	3300012893	Soil	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR*
Ga0157309_100061972	3300012895	Soil	MGEAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157293_100508862	3300012898	Soil	MKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPDLTRKLLASLSGERR
Ga0157288_103105801	3300012901	Soil	ESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157296_100926894	3300012905	Soil	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKLRLEEALGPELTRKLLTSLSSERR*
Ga0157286_101278322	3300012908	Soil	MKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLAS
Ga0157290_101310372	3300012909	Soil	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRPADANARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLESLDTPDRQ*
Ga0157301_100221063	3300012911	Soil	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTHAKVRLEEALGSELMRRLLTSLSSERR*
Ga0157301_100652451	3300012911	Soil	MKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTQKLLASLSGERR
Ga0157306_102836012	3300012912	Soil	MKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSLSGERR
Ga0164241_100885352	3300012943	Soil	MGEASFPPRRDDASTASRPIFKDMKSAVESRPADANARDLHLLLDCLALGRPEHRRPPAKVRLEEALGPDLTQRLLTSLSDERS*
Ga0164241_105452712	3300012943	Soil	MKSAVESRPADTNARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTRKLLASLSGERR
Ga0164309_109754202	3300012984	Soil	MGEAPFPPGRDDGTTPSRPIFKDMKSAVESRPADANARDLHLLLDCLALGKPDTRRTPPKVRLEEALGPELMRKLLTSLSSERR*
Ga0164308_111433761	3300012985	Soil	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTS
Ga0164305_100280122	3300012989	Soil	MGEAPFPPGRDDGTTPSRPIFKDMKSAVESRPADANARDLHLRLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0157307_10504952	3300013096	Soil	CVVRREAAGPLMGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157369_104476272	3300013105	Corn Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157378_102119743	3300013297	Miscanthus Rhizosphere	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0163162_100813523	3300013306	Switchgrass Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0163162_130664141	3300013306	Switchgrass Rhizosphere	MKSAVESRPAGANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0075322_11691052	3300014311	Natural And Restored Wetlands	MKSAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSL
Ga0163163_106025141	3300014325	Switchgrass Rhizosphere	AAGPLMGEAPFPPGRDEALMPFRPIFHSMKSAVESRPADANARDPHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0157376_130178772	3300014969	Miscanthus Rhizosphere	RDDGAMPSRPIFKNMKSAVETMPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR*
Ga0173478_102477402	3300015201	Soil	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR*
Ga0132258_110261534	3300015371	Arabidopsis Rhizosphere	MGEAPFPPGRDDGATPCRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0132258_130018162	3300015371	Arabidopsis Rhizosphere	MKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR
Ga0132258_135659492	3300015371	Arabidopsis Rhizosphere	MGEAPFPPGRDDGSTPSRPIFESMKSAVESRPADANARDLHVLLDCLALGKPHQRRLPAKVRLEAALGPELTQRLLSSLSVERR*
Ga0132256_1021543352	3300015372	Arabidopsis Rhizosphere	RPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSGERR*
Ga0132257_1011889471	3300015373	Arabidopsis Rhizosphere	AGPLMGEAPFPPGRDDGATPCRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0132255_1031310893	3300015374	Arabidopsis Rhizosphere	VVRREAAGPLMGEAPFPPGRDDGATPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR*
Ga0132255_1043416822	3300015374	Arabidopsis Rhizosphere	VVRREAAGPLMGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELTRRLLTSLSSERR*
Ga0173481_100977571	3300019356	Soil	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR
Ga0173482_100045052	3300019361	Soil	MPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0173479_100007503	3300019362	Soil	MGEAPFPPGRDDAPMPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0182009_106039672	3300021445	Soil	MGEAPFPPGRDDAPMPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTQKLLASLSGERR
Ga0247747_10223862	3300022737	Soil	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0247753_10336172	3300022892	Soil	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR
Ga0247791_10582942	3300023062	Soil	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLL
Ga0247755_10163622	3300023070	Plant Litter	MGEAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0247752_10309622	3300023071	Soil	MGEAPFPPGRDDAPMPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRPPAKVRLEEALGPD
Ga0247773_10283292	3300023269	Plant Litter	MPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0247794_101788041	3300024055	Soil	MPSRPIFQSMKLAVESRPADTNARDLHLLLDCLALGKPDNRLPAKVRLEEALGPELTRKLLLSLSGERR
Ga0207697_102392492	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207656_104948531	3300025321	Corn Rhizosphere	EAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207653_100240513	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207682_100735142	3300025893	Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207642_110354291	3300025899	Miscanthus Rhizosphere	PPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207642_110939381	3300025899	Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSER
Ga0207645_102910632	3300025907	Miscanthus Rhizosphere	MGEAPFPPGRDDGATPSRPIFKSMKSAVESRAADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR
Ga0207654_112440612	3300025911	Corn Rhizosphere	MGEAPFPPGRDDGATPSRPIFKNMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207671_110116351	3300025914	Corn Rhizosphere	MPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207660_105060343	3300025917	Corn Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEGALGPELMRKLLTSLSSERR
Ga0207649_105740622	3300025920	Corn Rhizosphere	MGEAPFPPGRDDGTTPSRPIFKSMKSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207652_111045581	3300025921	Corn Rhizosphere	LMGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207694_100126728	3300025924	Corn Rhizosphere	MGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPELTRKLLASLSGERR
Ga0207650_108273981	3300025925	Switchgrass Rhizosphere	VRRKAAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207659_104987793	3300025926	Miscanthus Rhizosphere	GRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207687_104047852	3300025927	Miscanthus Rhizosphere	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPANANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207687_109677731	3300025927	Miscanthus Rhizosphere	ATPSRPIFKSMKSAVESRAADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR
Ga0207709_114418132	3300025935	Miscanthus Rhizosphere	EAPFTPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207669_102102531	3300025937	Miscanthus Rhizosphere	GAMPSRPVFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0207661_115237832	3300025944	Corn Rhizosphere	KSAVESRVADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRRLLTSLSSERR
Ga0207667_118566791	3300025949	Corn Rhizosphere	GRARVGVVRREAAGPLMGEAPFPPGRDEALMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207677_118089861	3300026023	Miscanthus Rhizosphere	APMPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207678_103284241	3300026067	Corn Rhizosphere	LMPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207702_118618072	3300026078	Corn Rhizosphere	FRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0207674_104145191	3300026116	Corn Rhizosphere	SMKSAVESRPADANARDLRLLLDCLALGKPDNRPPAKVRLEEALGPDLTRKLLASLSGER
Ga0268265_120742142	3300028380	Switchgrass Rhizosphere	MPFRPIFQSMKSAVESRPADANARDLHLLLDCLALGKPDNRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0247820_113659491	3300028597	Soil	RGPRLCIVRREAAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0310904_105688502	3300031854	Soil	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDVRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0310892_103973211	3300031858	Soil	PSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0310891_100774653	3300031913	Soil	KNMKSAVESRPADANARDLHLLLDCLALGKPDVRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0308175_1008337092	3300031938	Soil	MKSAVESRPADANARDLHLLLDCLALGKPDDRRPPAKVRLEEALGPDLTRKLLASLSGER
Ga0308176_101626962	3300031996	Soil	MGEAPFPPGRDDAPMPSRPIFQSMKSAVESRPADANARDLHLLLDCLALGRPDDRRPPAKVRLEEALGPDLTRKLLASLSGERR
Ga0307416_1013549402	3300032002	Rhizosphere	MKSAVESRPADANARDLHLILDCLALGKPDDRRPPAKVRLEEALGPDLTRKLLASLSGER
Ga0310906_105300561	3300032013	Soil	DRELPRGARLCVVRREAAGPLMGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRTPAKVRLEEALGPELMRKLLTSLSSERR
Ga0314781_106439_305_556	3300034660	Soil	MGEAPFPPGRDDGAMPSRPIFKNMKSAVESRPADANARDLHLLLDCLALGKPDIRRPAKVRLEEALGPELMRKLLTSLSSERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences