Metagenome / Metatranscriptome Family F050495

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	50 residues
Representative Sequence	RVAAAYVKKYKMDPRSMGEPIFIVRPKTVFGFIEKSFPKSATRWKL
Number of Associated Samples	127
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.83 %
% of genes near scaffold ends (potentially truncated)	93.79 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.552 % of family members)
Environment Ontology (ENVO)	Unclassified (28.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.68% β-sheet: 0.00% Coil/Unstructured: 74.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF03631	Virul_fac_BrkB	40.69
PF13570	PQQ_3	6.21
PF07228	SpoIIE	3.45
PF00313	CSD	3.45
PF00903	Glyoxalase	2.07
PF02566	OsmC	1.38
PF13517	FG-GAP_3	1.38
PF13185	GAF_2	1.38
PF00107	ADH_zinc_N	0.69
PF04542	Sigma70_r2	0.69
PF00486	Trans_reg_C	0.69
PF00145	DNA_methylase	0.69
PF01740	STAS	0.69
PF07676	PD40	0.69
PF14534	DUF4440	0.69
PF08240	ADH_N	0.69
PF04185	Phosphoesterase	0.69
PF12867	DinB_2	0.69
PF16864	Dimerisation2	0.69
PF10041	DUF2277	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	40.69
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.38
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.38
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.62 %
Unclassified	root	N/A	1.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.97 %
Unclassified	root	N/A	1.38 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.34 %
Unclassified	root	N/A	1.38 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.97 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.38 %
Unclassified	root	N/A	1.38 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.28 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1.38 %
Unclassified	root	N/A	1.38 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.79 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.76 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1.38 %
Unclassified	root	N/A	1.38 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.79 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.07 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1.38 %
Unclassified	root	N/A	1.38 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10126253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300001174\|JGI12679J13547_1004413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300001546\|JGI12659J15293_10096224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300001593\|JGI12635J15846_10192706	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300002245\|JGIcombinedJ26739_100377088	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300002245\|JGIcombinedJ26739_101108858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300002245\|JGIcombinedJ26739_101228653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300004080\|Ga0062385_10267795	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300004082\|Ga0062384_100310344	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005332\|Ga0066388_100772256	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300005468\|Ga0070707_100138868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2365	Open in IMG/M
3300005536\|Ga0070697_101098327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005591\|Ga0070761_10105483	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300005610\|Ga0070763_10390169	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005610\|Ga0070763_10964129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005921\|Ga0070766_10439007	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005952\|Ga0080026_10278804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005995\|Ga0066790_10080861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1398	Open in IMG/M
3300006050\|Ga0075028_100065230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300006052\|Ga0075029_100017948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3938	Open in IMG/M
3300006059\|Ga0075017_100221105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300006059\|Ga0075017_100676530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300006059\|Ga0075017_101682095	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006102\|Ga0075015_101028585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006162\|Ga0075030_101030726	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006176\|Ga0070765_101015636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009038\|Ga0099829_10067329	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300009088\|Ga0099830_10042685	All Organisms → cellular organisms → Bacteria	3155	Open in IMG/M
3300009088\|Ga0099830_10490389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300009143\|Ga0099792_10739831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300009143\|Ga0099792_10803601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300009143\|Ga0099792_10978248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	564	Open in IMG/M
3300009519\|Ga0116108_1072430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300009617\|Ga0116123_1049606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300009639\|Ga0116122_1248514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300009665\|Ga0116135_1386047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300009762\|Ga0116130_1236831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009764\|Ga0116134_1005523	All Organisms → cellular organisms → Bacteria	5776	Open in IMG/M
3300010341\|Ga0074045_10746968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300010343\|Ga0074044_10132059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1675	Open in IMG/M
3300010358\|Ga0126370_10908434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	796	Open in IMG/M
3300010358\|Ga0126370_12030810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300010379\|Ga0136449_103399818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300010379\|Ga0136449_103775828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300011271\|Ga0137393_10218236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300012202\|Ga0137363_11125564	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012203\|Ga0137399_10121674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2051	Open in IMG/M
3300012205\|Ga0137362_10292722	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300012361\|Ga0137360_10354558	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300012362\|Ga0137361_11459126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012363\|Ga0137390_10646595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300012582\|Ga0137358_10437133	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012923\|Ga0137359_11435451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012927\|Ga0137416_10698730	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012930\|Ga0137407_11275847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012930\|Ga0137407_11998592	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300014162\|Ga0181538_10345508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300014162\|Ga0181538_10642732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300014169\|Ga0181531_10136805	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300014201\|Ga0181537_10793025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300014491\|Ga0182014_10111578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1620	Open in IMG/M
3300014502\|Ga0182021_12700212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300014655\|Ga0181516_10520037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300014838\|Ga0182030_10101183	All Organisms → cellular organisms → Bacteria → Acidobacteria	3976	Open in IMG/M
3300014839\|Ga0182027_12364108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300015242\|Ga0137412_10355601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300016702\|Ga0181511_1276735	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300017822\|Ga0187802_10027673	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300017823\|Ga0187818_10205361	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300017925\|Ga0187856_1302369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300017933\|Ga0187801_10330745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300017943\|Ga0187819_10563293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300017944\|Ga0187786_10089992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300017946\|Ga0187879_10127432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1449	Open in IMG/M
3300017955\|Ga0187817_10016775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4298	Open in IMG/M
3300017955\|Ga0187817_10262220	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300017959\|Ga0187779_10068219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2097	Open in IMG/M
3300017966\|Ga0187776_10967999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300017975\|Ga0187782_11015485	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300018025\|Ga0187885_10428459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300018033\|Ga0187867_10189843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300018034\|Ga0187863_10844540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300018035\|Ga0187875_10172514	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300018038\|Ga0187855_10859667	Not Available	529	Open in IMG/M
3300018040\|Ga0187862_10203585	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300018058\|Ga0187766_10672752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300018062\|Ga0187784_10233900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300018062\|Ga0187784_10786553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300018086\|Ga0187769_11120288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300018090\|Ga0187770_10375545	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300019888\|Ga0193751_1043829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1976	Open in IMG/M
3300020580\|Ga0210403_10706746	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300020580\|Ga0210403_11182753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021170\|Ga0210400_10006892	All Organisms → cellular organisms → Bacteria	9485	Open in IMG/M
3300021181\|Ga0210388_10734189	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300021559\|Ga0210409_11149591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021560\|Ga0126371_13555855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300023101\|Ga0224557_1184513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300023250\|Ga0224544_1025932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300025506\|Ga0208937_1009227	All Organisms → cellular organisms → Bacteria	2609	Open in IMG/M
3300025527\|Ga0208714_1017213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1799	Open in IMG/M
3300025527\|Ga0208714_1104444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300025579\|Ga0207927_1058474	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300025878\|Ga0209584_10131287	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300026294\|Ga0209839_10087270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300026555\|Ga0179593_1083521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2239	Open in IMG/M
3300027334\|Ga0209529_1076534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300027587\|Ga0209220_1180642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300027609\|Ga0209221_1023534	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300027629\|Ga0209422_1004171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3524	Open in IMG/M
3300027737\|Ga0209038_10100627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300027853\|Ga0209274_10040114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2200	Open in IMG/M
3300027853\|Ga0209274_10523914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300027854\|Ga0209517_10548745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300027862\|Ga0209701_10007212	All Organisms → cellular organisms → Bacteria	7246	Open in IMG/M
3300027875\|Ga0209283_10026258	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300027895\|Ga0209624_10019454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4303	Open in IMG/M
3300027903\|Ga0209488_10749119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300027911\|Ga0209698_11292624	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300028536\|Ga0137415_10889920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300028731\|Ga0302301_1160926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300028855\|Ga0302257_1068066	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300028869\|Ga0302263_10044367	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300029913\|Ga0311362_10207537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2226	Open in IMG/M
3300029939\|Ga0311328_10804415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300029984\|Ga0311332_10058636	All Organisms → cellular organisms → Bacteria	2711	Open in IMG/M
3300030007\|Ga0311338_11045332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300030019\|Ga0311348_11062997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300030049\|Ga0302191_10352363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300030688\|Ga0311345_10104167	All Organisms → cellular organisms → Bacteria → Acidobacteria	3219	Open in IMG/M
3300030838\|Ga0311335_10137078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1605	Open in IMG/M
3300031521\|Ga0311364_10635291	Not Available	1076	Open in IMG/M
3300031525\|Ga0302326_13114056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031715\|Ga0307476_11352690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300031720\|Ga0307469_10592800	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300031754\|Ga0307475_10411138	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031754\|Ga0307475_11275192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300032160\|Ga0311301_10903204	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300032805\|Ga0335078_11111186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300032955\|Ga0335076_10236936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1721	Open in IMG/M
3300033433\|Ga0326726_10476232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1192	Open in IMG/M
3300033807\|Ga0314866_107978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300033826\|Ga0334847_033460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300033977\|Ga0314861_0343045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300034091\|Ga0326724_0257942	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.10%
Aquatic	Environmental → Aquatic	26.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.69%
Freshwater	Environmental → Aquatic → Freshwater	21.38%
Peat	Environmental → Terrestrial → Peat	12.41%
Sediment	Environmental → Aquatic → Sediment	5.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.17%
Loam	Environmental → Terrestrial → Soil → Loam	14.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.38%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.14%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.07%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.07%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.07%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.38%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.38%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.38%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.38%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_101262531	3300000574	Groundwater	KDAAALECIAGAYKKKYKMDPRSMGEPIFVVRPRTVFGFIEKSFPKSATRWKF*
JGI12679J13547_10044132	3300001174	Forest Soil	EDAENLERIATAYKKKYKMDPRSMNEPIFVVRPQRVFGFIEKTFPKSATRWKQEHM*
JGI12659J15293_100962241	3300001546	Forest Soil	RPIAAAATLDRVAAAYKKKYKMDPRSMNEPIFEVHPRKVFAFIEKSFPKSATRWTL*
JGI12635J15846_101927061	3300001593	Forest Soil	ITYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTYPQSATRWKL*
JGIcombinedJ26739_1003770881	3300002245	Forest Soil	GEDAVIVEGRASEVEDAKMLERIASAYKKKYKMDPRSMGEPIFAVRPHRVFGFIEKSFPKSATRWKLKNS*
JGIcombinedJ26739_1011088582	3300002245	Forest Soil	ELERIATAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPHSATRWRL*
JGIcombinedJ26739_1012286532	3300002245	Forest Soil	IAAAATLDRVAAAYKKKYKMDPRSMNEPIFEVHPRKVFAFIEKSFPKSATRWTL*
Ga0062385_102677952	3300004080	Bog Forest Soil	ELERVALAYKKKYKMDPRSMGEPIFRVQPNRVFGFIEKSFPKSATRWRLENL*
Ga0062384_1003103442	3300004082	Bog Forest Soil	GLATQVDDAAALERVANVYKKKYKMDPRGMGEPIFVLRPRRVFGLIEKSFPKSATRWKF*
Ga0066388_1007722561	3300005332	Tropical Forest Soil	TAYKKKYKMDPRGMNEPIFVVRPSRVFGFLEKTFPQSATRWTM*
Ga0070707_1001388681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIVEGLATQAEDAAEQERVAIAYKKKYKMDPRSMGEPIYCVKPVRVFGFVERTFPQSATRWKP*
Ga0070697_1010983271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AYKKKYKMDPRSMGEPIFRVCPRTVFAFIEESFPKSATRWRFGD*
Ga0070761_101054832	3300005591	Soil	ATAYKKKYKMDPRSMNEPIFIVRPKTVFGFIEKTFPKSATRWKFEI*
Ga0070763_103901692	3300005610	Soil	ALERVAAAYKKKYKMDPRSMKEPIFMVRPKTVFGFIEKSFPKSATRWKFENS*
Ga0070763_109641291	3300005610	Soil	EGQATEVEDAAALDRIAAAYKKKYKMDPRSMKEPIFGVRPKKMFGFIEKTFPKSATRWQL
Ga0070766_104390072	3300005921	Soil	YKMDPRSMGEPIFMVRPKTVFGFIEKSFPKSATRWKF*
Ga0080026_102788041	3300005952	Permafrost Soil	AIAYEKKYKMDPRGMGEPIFRVQPSRVFGFVEKTFPQSATRWQL*
Ga0066790_100808612	3300005995	Soil	RLEDEAKLKKMAAAYKKKYKMDPRSMSEPIFVVRPSTVFGFIEKSFPKSATRWKL*
Ga0075028_1000652301	3300006050	Watersheds	DVVALERVAAAYVKKYKMDPRGMGEPIFIVRPNRVFGFIEKSFPQSATRWRL*
Ga0075029_1000179481	3300006052	Watersheds	YKMDPRSMGEPIFKVTPSRVFGFVEKSFPQSATRWKM*
Ga0075017_1002211051	3300006059	Watersheds	YKMDPRSMKEPIFIVRPTTVFGLIERSFPNSATRWRL*
Ga0075017_1006765302	3300006059	Watersheds	VAAAYTKKYKMDPRNMGEPIFIVRPKTVFAFIEKTFPTSATRWKLGKL*
Ga0075017_1016820951	3300006059	Watersheds	AYVKKYKMDPRSMGEPIFMVRPKTVFGLIEKSFPKSATRWRL*
Ga0075015_1010285852	3300006102	Watersheds	YKMDPRGMGEPIFRVTPSRVFGLVEKTFPQSATRWKL*
Ga0075030_1010307261	3300006162	Watersheds	YKMDPRSMGEPIFMVRPKTVFGLIEKSFPKSATRWRL*
Ga0070765_1010156361	3300006176	Soil	MKYKMDPRSMGEPIFMVRPKTVFGFIEKSFPKSATRWKF*
Ga0099829_100673294	3300009038	Vadose Zone Soil	MTIFHHSMGEPIFMVRSRAVFGFIEKSFPKSSTRWRIGNL*
Ga0099830_100426852	3300009088	Vadose Zone Soil	MTIFHHSMGEPIFMVRSRAVFGFIEKSFPKSATRWRIGNL*
Ga0099830_104903891	3300009088	Vadose Zone Soil	AYKKKYKMDPRSMGEPIFVVRPGTVFGFIEKSFPKSATRWRIGN*
Ga0099792_107398312	3300009143	Vadose Zone Soil	DGRATQAEDAEELERVATAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWRL
Ga0099792_108036011	3300009143	Vadose Zone Soil	TQAEDAAEQERVAVAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWRL*
Ga0099792_109782481	3300009143	Vadose Zone Soil	KYKMDPRSMNEPIFVVRPKTVFGFIEESFPKSATRWQMGS*
Ga0116108_10724301	3300009519	Peatland	RVAAAYKKKYKIDPRSIGEPIFIVRPKTVFGFIEKSFPKSATRWKLDNL*
Ga0116123_10496061	3300009617	Peatland	IDPRSIGEPIFIVRPKTVFGFIEKSFPKSATRWKLDNL*
Ga0116122_12485141	3300009639	Peatland	VAAAYKKKYKIDPRSIGEPIFIVRPKTVFGFIEKSFPKSATRWKLDNL*
Ga0116135_13860471	3300009665	Peatland	AYKKKYKMDPRSMGEPIFRVTPRRVFGLVEKTFPQTATRWKL*
Ga0116130_12368311	3300009762	Peatland	VIVEGLATQVEDAAALERIAAAYQKKYKMDPRSMGEPIFIVRPKTVFGFIEKSFPKSATRWKF*
Ga0116134_10055231	3300009764	Peatland	IAYKKKYKMDPRSMGEPIFRVQPRKVFAFVEKSFAQSATRWKV*
Ga0074045_107469682	3300010341	Bog Forest Soil	IVEGQASPLEDASQLERIAAAYKKKYKMDPRSMGEPIFIVCPKTVFGFIEKTFPKSATRWKL*
Ga0074044_101320591	3300010343	Bog Forest Soil	VEDAAELEHIATAYKKKYKMDPRSMEEPIFCVRPTTVFGFIEKSFPKSATRWKL*
Ga0126370_109084341	3300010358	Tropical Forest Soil	KKYKMDPTDVKEPIYAARPKTVFAFVEKTFPKSATRWGF*
Ga0126370_120308101	3300010358	Tropical Forest Soil	DDGKEAVIVEASASDLKDAAVLERVVAAYKKKYKMDPTSMKEPIFVARPKTVFAFVEKTFPKSATRWNF*
Ga0136449_1033998182	3300010379	Peatlands Soil	VAIAYNKKYKMDPRSMGEPIFIVRPKVVFGFIEKSFPKSATRWKL*
Ga0136449_1037758282	3300010379	Peatlands Soil	MDPRGMGEPIFEVRPSKVFGFIEKSFPKSATRWKL*
Ga0137393_102182362	3300011271	Vadose Zone Soil	MTIFHHSMGEPIFMVRSRAVFGFIEKSFPKSATRWKMGNL*
Ga0137363_111255642	3300012202	Vadose Zone Soil	PALERVAAAYKKKYKMDPRSMGEPIFVVRPRTVFGFIEKSFPKSATRWRL*
Ga0137399_101216742	3300012203	Vadose Zone Soil	LATQAEDAAEQERVAVAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWKL*
Ga0137362_102927221	3300012205	Vadose Zone Soil	DAAEQERVAVAYKKKYKMDPRSMGEPILRVKPSRVFGFVEKTFPQSATRWKL*
Ga0137360_103545582	3300012361	Vadose Zone Soil	LATEIIDASALQRIATAYKKKYKMDPRGMGEPIFMVRPKTVFGFIEKSFPNSATRWKVANL*
Ga0137361_114591261	3300012362	Vadose Zone Soil	KKKYKMDPRSMGEPIFVVRPGTVFGFIEKSFPKSATRWRF*
Ga0137390_106465952	3300012363	Vadose Zone Soil	AAVLERIATAYKKKYKMDPRSMGEPIFRVQPSRVVGFVEKTFPQSATRWKL*
Ga0137358_104371333	3300012582	Vadose Zone Soil	AYKKKYKMDPRSMNEPIFVVRPRTEFGFIEKSFPKSATRWRMGK*
Ga0137359_114354511	3300012923	Vadose Zone Soil	KKKYKMDPRSMGEPIYRVKPVRVFGFVERTFPQSATRWKP*
Ga0137416_106987301	3300012927	Vadose Zone Soil	YKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWKL*
Ga0137407_112758471	3300012930	Vadose Zone Soil	DPRSMNEPIFVVRPRTVVGFIEESFPKSATRWGFGK*
Ga0137407_119985922	3300012930	Vadose Zone Soil	VEGSAQAGKDQTQLERVAAAYKKKYKMDPRSMGETIFAVSPRIVFGFVEKSFPKSATRWKL*
Ga0181538_103455082	3300014162	Bog	DDGEEAVIVEGLATQLEDAAALERVANAYQKKYKMDPRSMGEPIFRVQPSRVFGLIEKSFAQSATRWKI*
Ga0181538_106427321	3300014162	Bog	NLVAKPACTVANDDGQEAVIVAGLATEVEDAAELERIAVAYKKKYKMDPRSMDEPIFMVRPKTVFGFIEKSFPKSATRWKL*
Ga0181531_101368054	3300014169	Bog	ERVATAYKKKYKMDPRGMNEPIFEVRPAKVFGFIEKSFPKSATRWTF*
Ga0181537_107930252	3300014201	Bog	IVEGLASPVEDNSTLERVATAYKKKYKMDPREMKEPIFRVQPSRVFGFVEKSFPRSATRWILSEW*
Ga0182014_101115781	3300014491	Bog	AYQKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWKL*
Ga0182021_127002121	3300014502	Fen	IVEGRAIQVEDAAALERIATTYKKKYKMDPRSMGEPIFRVQPSLVFGFVERTFPQSATRWKL*
Ga0181516_105200372	3300014655	Bog	DGVEAVIVQGNARELKDAVVLERVATAYKKKYKMDPRGMNEPIFEVRPAKVFGFIEKSFPKSATRWTF*
Ga0182030_101011833	3300014838	Bog	RVAAAYQKKYKTDPRSMQEPIFRVQPTKVFGFVEKTFPQSATRWQP*
Ga0182027_123641081	3300014839	Fen	RIATAYKKKYKMDPRSMGEPIFRVQPSLVFGFVEKTFPQSATRWKL*
Ga0137412_103556011	3300015242	Vadose Zone Soil	IVEGSAEEVKDAPALERVAAAYKKKYKMDPRSMNEPIFVVRPKTVFGFIEESFPKSATRWQMGS*
Ga0181511_12767352	3300016702	Peatland	IVEGTAAPVEDAADLERIATAYKKKYKMDPRGMEEPIFRVQPSRVFGFVEKTFPQSATRWKL
Ga0187802_100276731	3300017822	Freshwater Sediment	AYKKKYKMDPRSMGEPIFIVRPRVVFGFIEKTFPKSATRWKSQDL
Ga0187818_102053612	3300017823	Freshwater Sediment	ALERIANAYKKKYKMDPRSMGEPIFIVRPRVVFGFLEKTFPKSATRWKLQNS
Ga0187856_13023691	3300017925	Peatland	VAAAYKKKYKIDPRSIGEPIFIVRPKTVFGFIEKSFPKSATRWKLDNL
Ga0187801_103307451	3300017933	Freshwater Sediment	MDPRGMGEPIFVVRPMTVFGLIEKSFPKSATRWKL
Ga0187819_105632931	3300017943	Freshwater Sediment	KKYKMDPRSMGEPIFIVRPRVVFGFIEKTFPKSATRWKLPNL
Ga0187786_100899923	3300017944	Tropical Peatland	DAEVLERVAAAYKKKYKMDPRSMGEPIFAVRPKIVFAFIEKTFPKTATRWKFKTV
Ga0187879_101274321	3300017946	Peatland	AVVVEGLATQVEDAASLEHIAIAYKKKYKMDPRSMGEPIFRVQPRKVFAFVEKSFAQSATRWKV
Ga0187817_100167751	3300017955	Freshwater Sediment	AANPACTIANDDGEEAVVVEGLATPVNDAVALERIANAYKKKYKMDPRSMGEPIFIVRPRVVFGFIEKTFPKSATRWKLQDL
Ga0187817_102622201	3300017955	Freshwater Sediment	INDAKTLERMAAAYKKKYKMDPRGMGEPIFVVRPSKVFAFIEKSFPKSATRWKL
Ga0187779_100682191	3300017959	Tropical Peatland	RVAAAYQKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWQL
Ga0187776_109679992	3300017966	Tropical Peatland	YKMDPRSMNEPIFCVRPKTVFAFVEKTFPKSATRWKL
Ga0187782_110154852	3300017975	Tropical Peatland	AREVKDPKTLARVASAYKKKYKIDPRGIGEPIYEVRPAKVFAFIEKSFPNSATRWRV
Ga0187885_104284592	3300018025	Peatland	AYKKKYKMDPRSMGEPIFRVQPRKVFAFVEKSFAQSATRWKV
Ga0187867_101898431	3300018033	Peatland	RVAAAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWRL
Ga0187863_108445401	3300018034	Peatland	VAAAYKRKYMMDPRSMGEPIFMVRPKTVFGLIEKSFPKSATRWRL
Ga0187875_101725141	3300018035	Peatland	KRVASAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWRL
Ga0187855_108596672	3300018038	Peatland	VEGQAKQVDGETLEVVAAVYKKKYKMDPRSMGEPIFMVRPSKVFAFIEKSFPKSATRWKL
Ga0187862_102035851	3300018040	Peatland	KYKMDPRSMEEPIFIVRPKTVFGFIEESFPKSATRWKL
Ga0187766_106727522	3300018058	Tropical Peatland	MDPRSMGEPIFAVRPKTVFGFIEKSFPKTATRWKLENR
Ga0187784_102339003	3300018062	Tropical Peatland	ANAYKKKYKMDPRSMGEPIFIVRPKVVFGFIEKTFPKSATRWKLQNS
Ga0187784_107865532	3300018062	Tropical Peatland	PVHDAAALERIANAYKKKYKMDPRSMGEPIFIVRPKVVFGLIEKSFPKSATRWKL
Ga0187769_111202881	3300018086	Tropical Peatland	VAFERVAVAYKRKYKCDLRGMGEPIFEVKPTKVFGFIEKSFPKSATRWKL
Ga0187770_103755453	3300018090	Tropical Peatland	AKKIEDAAALEHVAGAYKKKYKMDPRGMGEPIFEVRPTKVFAFIEKSFPKSATRWRV
Ga0193751_10438291	3300019888	Soil	EGLATEVTDAAALQRIATAYKKKYKMDPRGMGEPIFVVRPKTVFGFIEKSFPNSATRWKVANL
Ga0210403_107067462	3300020580	Soil	LANQTEDAAEQERVAIAYKKKYKMDPRSMGEPIYRVKPVRVFGFVERTFPQSATRWKP
Ga0210403_111827532	3300020580	Soil	SALERIAMAYKKKYKMDPRSMAEPIFRVDPVRTFGFIEKTFPRSATRWKTGKNLDRNVTGSG
Ga0210400_100068921	3300021170	Soil	ERVATAYKKKYKMDPRSMKEPIFRVQPGRVFGFVEKTFPQSATRWKL
Ga0210388_107341892	3300021181	Soil	KKKYKMDPRSMKEPIFIVRPKTVFGFIEKSFPKSATRWKFGNS
Ga0210409_111495911	3300021559	Soil	AAEQERVAVAYKKKYKMDPRSMGEPIFRVKPSRVFGFVEKTFPQSATRWRL
Ga0126371_135558552	3300021560	Tropical Forest Soil	DAAVLERVIVAYKKKYKMDPTSMKEPIFVARPKIVFAFVEKAFPKSATRWNF
Ga0224557_11845132	3300023101	Soil	VQVEDAAALERIATAYQKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWKL
Ga0224544_10259322	3300023250	Soil	PVEESSPLKRIAAVYKKKYKLDPRSMNEPIFIVRPSTVFGFIEKSFPKSATRWKFTNL
Ga0208937_10092276	3300025506	Peatland	LQRVAAAYKKKYKIDPRSIGEPIFIVRPKTVFGFIEKSFPKSATRWKLDNL
Ga0208714_10172131	3300025527	Arctic Peat Soil	RVAAAYVKKYKMDPRSMGEPIFIVRPKTVFGFIEKSFPKSATRWKL
Ga0208714_11044441	3300025527	Arctic Peat Soil	CTLSNDDGQEAVIVEGLATQVEDAASLERVAAAYTKKYKMDPRGMGEPIFHVEPSRVFGFVEKTFPKSATRWKL
Ga0207927_10584741	3300025579	Arctic Peat Soil	ERVAVVYKKKYKMDPRSMGEPIFVVRPNTVFGLIEKSFPKSATRWKL
Ga0209584_101312871	3300025878	Arctic Peat Soil	GLAIQVEDATALERIATAYQNKYKMDPRDMGEPIFRVKPSRVFGLVEKTFPQSATRWKL
Ga0209839_100872703	3300026294	Soil	MAAAYKKKYKMDPRSMSEPIFEVRPSTVFGFIEKSYPKSATRWKL
Ga0179593_10835212	3300026555	Vadose Zone Soil	VIVEGLATEVQKPMELERIAAAYQKKYKMDPRSMSEPIFRVDPSRVFGFVEKTFPQSATRWNPHQKPSPNP
Ga0209529_10765342	3300027334	Forest Soil	GQAAEVNDPAQLDRIAAAYKKKYKMDPRGMKEPIYSVRPEKMFGFIEKSFPKSATRWKL
Ga0209220_11806422	3300027587	Forest Soil	IAYKKKYKIDPRSMGEPIFRVEPSRVFGFVEKTFPQSATRWKL
Ga0209221_10235341	3300027609	Forest Soil	LKRVAMAYKKKYKMDPRSMGEPIFRVAPRRVFGFVEKTFPQTATRWKL
Ga0209422_10041717	3300027629	Forest Soil	MDPRSMNEPIFVVRPQRVFGFIEKTFPKSATRWKQEHM
Ga0209038_101006271	3300027737	Bog Forest Soil	KKYKMDPRSMEEPIFCVQPRRVFGFVEKTFPQSATRWRYDL
Ga0209274_100401143	3300027853	Soil	VATAYKKKYKMDPRSMNEPIFIVRPKTVFGFIEKTFPKSATRWKFEI
Ga0209274_105239141	3300027853	Soil	VIIEGLATPVEDASVLARAAAAYKKKYKMDPRSMNEPIFIVRPSTVFGFIEKSFPKSATRWKFKNL
Ga0209517_105487452	3300027854	Peatlands Soil	RVAIAYNKKYKMDPRSMGEPIFIVRPKVVFGFIEKSFPKSATRWKL
Ga0209701_100072122	3300027862	Vadose Zone Soil	MTIFHHSMGEPIFMVRSRAVFGFIEKSFPKSATRWRIGNL
Ga0209283_100262584	3300027875	Vadose Zone Soil	MTIFHHSMGEPIFMVRSRAVFGFIEKSFPKSATRWKMGNL
Ga0209624_100194541	3300027895	Forest Soil	RPIAAAATLDRVAAAYKKKYKMDPRSMNEPIFEVHPRKVFAFIEKSFPKSATRWTL
Ga0209488_107491191	3300027903	Vadose Zone Soil	NDDGEEAVIVEGLATQAEDAAEQERVAIAYKRKYKMDPRSMGEPIFRVDPSRVFGFVERTFPQSATRWKL
Ga0209698_112926241	3300027911	Watersheds	YKMDPRSMGEPIFMVRPKTVFGLIEKSFPKSATRWRL
Ga0137415_108899201	3300028536	Vadose Zone Soil	YKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWKL
Ga0302301_11609261	3300028731	Palsa	IIEGLATPVEDSAALKRIAAVYKKKYKLDPRSMNEPIFIVRPSTVFGFIEKSFPKSATRWKFTNL
Ga0302257_10680661	3300028855	Fen	KKKYRMDPRSMGEPIFIVRPRTVFGFIEKSFPQSATRWKL
Ga0302263_100443674	3300028869	Fen	MDPRSMGEPIFIVRPRTVFGFIEKSFPQSATRWKL
Ga0311362_102075371	3300029913	Bog	DPAQEERVAAAYQKKYKTDPRSMQEPIFRVQPTKVFGFVEKTFPQSATRWQP
Ga0311328_108044151	3300029939	Bog	TGSALEERVAAAYRKKYKMDPRSMKEPIFRVQPTKVFGFVEKTFPQSATRWQPR
Ga0311332_100586364	3300029984	Fen	ALDRIAAAYKKKYRMDPRSMGEPIFIVRPRTVFGFIEKSFPQSATRWKL
Ga0311338_110453322	3300030007	Palsa	VIIEGLATPVEDSAALKRIAAVYKKKYKLDPRSMNEPIFIVRPSTVFGFIEKSFPKSATRWKFTNL
Ga0311348_110629971	3300030019	Fen	KGAAVLERFAAAYIKKYKMDPLGMGEPIFRVRPSRVFGFVEKTFPQSATRWKL
Ga0302191_103523632	3300030049	Bog	EGDAAVLSDATELQRVAAAYKKKYKMDPRSMGEPIFRVRPVKVFGLVEKTFPKSATRWKLPRSSASN
Ga0311345_101041673	3300030688	Bog	DPAQEERVAAAYQKKYKTDPRSMHEPIFRVQPTKVFGFVEKTFPQSATRWQP
Ga0311335_101370781	3300030838	Fen	GKKYKMDPRSMGEPIFRVRSRAVFGFVEKTFPKTATRWRF
Ga0311364_106352912	3300031521	Fen	KYKMDPRSMGEPIFRVRSRAVFGFVEKTFPKTATRWRF
Ga0302326_131140562	3300031525	Palsa	SAALKRIAAVYKKKYKLDPRSMNEPIFIVRPSTVFGFIEKSFPKSATRWKFTNL
Ga0307476_113526902	3300031715	Hardwood Forest Soil	MAAAYKRKYKMDPRSMKEPIFRVRPTKVFGFIEKSFPKSATRWQL
Ga0307469_105928002	3300031720	Hardwood Forest Soil	ALERVAAAYKKKYKMDPRSMGEPIFMVRPRTVFGFIEESFPNSATRWRMGK
Ga0307475_104111382	3300031754	Hardwood Forest Soil	KKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWNYDG
Ga0307475_112751921	3300031754	Hardwood Forest Soil	EGQATQAEDAAEQERVAIAYKKKYKMDPRSMGEPIFRVQPSRVFGFVEKTFPQSATRWRL
Ga0311301_109032041	3300032160	Peatlands Soil	RVANAYKKKYKMDPRSMGEPIFIVRPRVVFGFIEKTFPKSATRWKLQNL
Ga0335078_111111862	3300032805	Soil	EEAVIVEGKAMEIDNASLLERVAASYKKKYKIDPRGMGEPIYRVEPAKIFALIEKSFPKSATRWKV
Ga0335076_102369361	3300032955	Soil	MEIDNASLLERVAASYKKKYKIDPRGMGEPIYRVEPAKIFALIEKSFPKSATRWKV
Ga0326726_104762321	3300033433	Peat Soil	KYKMDPRSMGEPIFAVRPRTVFGFIEKSFPKSATRWRVGNL
Ga0314866_107978_371_481	3300033807	Peatland	MDPRAMNEPIFVVRPGKVFAFIEKSFPKSATRWMPR
Ga0334847_033460_2_157	3300033826	Soil	ATALERIATAYQKKYKMDPRDMGEPIFRVKPSRVFGLVEKTFPQSATRWKL
Ga0314861_0343045_503_664	3300033977	Peatland	DDSAALERVAVAYKKKYKMDPRGMGEPIFEVRPSKVFGFIEKSFPKSATRWTL
Ga0326724_0257942_860_994	3300034091	Peat Soil	AAAYKKKYKMDPRSMGEPIFRVQPRRVFGFVEKTFPQSATRWKF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050495

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences