NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049184

Metagenome / Metatranscriptome Family F049184

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049184
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 73 residues
Representative Sequence AVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGKITTWTWGHSTITIPCSRLRR
Number of Associated Samples 137
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.32 %
% of genes from short scaffolds (< 2000 bps) 93.20 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.905 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(19.048 % of family members)
Environment Ontology (ENVO) Unclassified
(21.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(38.776 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.31%    β-sheet: 10.75%    Coil/Unstructured: 41.94%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF00491Arginase 17.69
PF03176MMPL 4.08
PF13840ACT_7 3.40
PF00903Glyoxalase 2.72
PF01546Peptidase_M20 2.04
PF01323DSBA 2.04
PF12900Pyridox_ox_2 2.04
PF02133Transp_cyt_pur 2.04
PF08044DUF1707 2.04
PF13561adh_short_C2 1.36
PF02909TetR_C_1 1.36
PF01593Amino_oxidase 1.36
PF13581HATPase_c_2 1.36
PF04951Peptidase_M55 1.36
PF13738Pyr_redox_3 1.36
PF00274Glycolytic 1.36
PF00561Abhydrolase_1 1.36
PF04149DUF397 0.68
PF00196GerE 0.68
PF03551PadR 0.68
PF02156Glyco_hydro_26 0.68
PF13302Acetyltransf_3 0.68
PF00589Phage_integrase 0.68
PF00144Beta-lactamase 0.68
PF00692dUTPase 0.68
PF01548DEDD_Tnp_IS110 0.68
PF01568Molydop_binding 0.68
PF10979DUF2786 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 17.69
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 4.08
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 4.08
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 1.36
COG3588Fructose-bisphosphate aldolase class 1Carbohydrate transport and metabolism [G] 1.36
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 0.68
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 0.68
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.68
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.68
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.68
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.68
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.68
COG2367Beta-lactamase class ADefense mechanisms [V] 0.68
COG3547TransposaseMobilome: prophages, transposons [X] 0.68
COG4124Beta-mannanaseCarbohydrate transport and metabolism [G] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.90 %
UnclassifiedrootN/A38.10 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459024|GZRSKLJ01AYIVHAll Organisms → cellular organisms → Bacteria528Open in IMG/M
3300001593|JGI12635J15846_10135705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1712Open in IMG/M
3300001867|JGI12627J18819_10323480Not Available622Open in IMG/M
3300003219|JGI26341J46601_10077929All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300004092|Ga0062389_103333165Not Available602Open in IMG/M
3300004152|Ga0062386_101099670All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300004479|Ga0062595_101300601Not Available654Open in IMG/M
3300005172|Ga0066683_10667991Not Available620Open in IMG/M
3300005185|Ga0066811_1029799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia506Open in IMG/M
3300005334|Ga0068869_100089687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2309Open in IMG/M
3300005335|Ga0070666_11104152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300005356|Ga0070674_100089125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2222Open in IMG/M
3300005406|Ga0070703_10179535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia817Open in IMG/M
3300005434|Ga0070709_10097298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1953Open in IMG/M
3300005434|Ga0070709_10406617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1017Open in IMG/M
3300005434|Ga0070709_10817301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia732Open in IMG/M
3300005436|Ga0070713_100528309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1115Open in IMG/M
3300005439|Ga0070711_101889080Not Available524Open in IMG/M
3300005440|Ga0070705_100950172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia694Open in IMG/M
3300005467|Ga0070706_101105722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia729Open in IMG/M
3300005468|Ga0070707_100416161All Organisms → cellular organisms → Bacteria → Terrabacteria group1304Open in IMG/M
3300005544|Ga0070686_100593983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia871Open in IMG/M
3300005545|Ga0070695_101214203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia621Open in IMG/M
3300005591|Ga0070761_10210238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1155Open in IMG/M
3300005602|Ga0070762_10132586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1475Open in IMG/M
3300005712|Ga0070764_10178816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1180Open in IMG/M
3300005921|Ga0070766_10333024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia982Open in IMG/M
3300006052|Ga0075029_100167525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1359Open in IMG/M
3300006086|Ga0075019_10984612Not Available544Open in IMG/M
3300006162|Ga0075030_100680422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces malaysiensis814Open in IMG/M
3300006173|Ga0070716_100198088Not Available1332Open in IMG/M
3300006577|Ga0074050_11701693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia1066Open in IMG/M
3300006579|Ga0074054_12111878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia591Open in IMG/M
3300006605|Ga0074057_12313730Not Available1902Open in IMG/M
3300006852|Ga0075433_10085780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2780Open in IMG/M
3300006893|Ga0073928_10453270Not Available928Open in IMG/M
3300009011|Ga0105251_10040512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2271Open in IMG/M
3300009162|Ga0075423_10938170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia918Open in IMG/M
3300009176|Ga0105242_10129698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2174Open in IMG/M
3300009520|Ga0116214_1183712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK784Open in IMG/M
3300009545|Ga0105237_12736309Not Available504Open in IMG/M
3300009551|Ga0105238_11623133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia677Open in IMG/M
3300009623|Ga0116133_1062229Not Available928Open in IMG/M
3300009665|Ga0116135_1312098Not Available623Open in IMG/M
3300009700|Ga0116217_10836598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia566Open in IMG/M
3300010379|Ga0136449_100902899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK1439Open in IMG/M
3300010379|Ga0136449_102449073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia751Open in IMG/M
3300010401|Ga0134121_13063869Not Available515Open in IMG/M
3300010876|Ga0126361_10162858Not Available749Open in IMG/M
3300012200|Ga0137382_10537936All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300012203|Ga0137399_10723579Not Available838Open in IMG/M
3300012924|Ga0137413_10399129Not Available988Open in IMG/M
3300012925|Ga0137419_11887836All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012951|Ga0164300_10534189Not Available678Open in IMG/M
3300012957|Ga0164303_10277451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia975Open in IMG/M
3300012960|Ga0164301_10246592Not Available1170Open in IMG/M
3300013297|Ga0157378_10787101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia976Open in IMG/M
3300014169|Ga0181531_10578321Not Available696Open in IMG/M
3300014201|Ga0181537_11034506Not Available555Open in IMG/M
3300016270|Ga0182036_11715618Not Available530Open in IMG/M
3300016319|Ga0182033_11548363Not Available599Open in IMG/M
3300016371|Ga0182034_12065142Not Available503Open in IMG/M
3300016404|Ga0182037_11212852Not Available663Open in IMG/M
3300016445|Ga0182038_10318595Not Available1278Open in IMG/M
3300017924|Ga0187820_1072434All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300017948|Ga0187847_10318384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia850Open in IMG/M
3300018001|Ga0187815_10268077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermocatellispora → Thermocatellispora tengchongensis723Open in IMG/M
3300018034|Ga0187863_10746662Not Available554Open in IMG/M
3300018043|Ga0187887_10861302Not Available536Open in IMG/M
3300018433|Ga0066667_10842053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium pygmaeum784Open in IMG/M
3300018433|Ga0066667_11505483Not Available595Open in IMG/M
3300020199|Ga0179592_10181423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744958Open in IMG/M
3300021170|Ga0210400_10721895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina819Open in IMG/M
3300021180|Ga0210396_11392443All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300021181|Ga0210388_11069096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina689Open in IMG/M
3300021402|Ga0210385_10837694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia706Open in IMG/M
3300021403|Ga0210397_10604066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina838Open in IMG/M
3300021405|Ga0210387_11352735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina614Open in IMG/M
3300021432|Ga0210384_10705184Not Available903Open in IMG/M
3300021479|Ga0210410_10851961Not Available798Open in IMG/M
3300022724|Ga0242665_10350036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia529Open in IMG/M
3300024254|Ga0247661_1011974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1458Open in IMG/M
3300024275|Ga0247674_1042793Not Available544Open in IMG/M
3300024295|Ga0224556_1181589Not Available515Open in IMG/M
3300024323|Ga0247666_1055309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia800Open in IMG/M
3300024325|Ga0247678_1014125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1185Open in IMG/M
3300024331|Ga0247668_1057526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia787Open in IMG/M
3300025735|Ga0207713_1172207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia682Open in IMG/M
3300025904|Ga0207647_10212122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → Pseudoclavibacter chungangensis1118Open in IMG/M
3300025906|Ga0207699_10741260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia720Open in IMG/M
3300025914|Ga0207671_10457642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Pseudoclavibacter → Pseudoclavibacter chungangensis1017Open in IMG/M
3300025915|Ga0207693_10811415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia721Open in IMG/M
3300025918|Ga0207662_10656096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia733Open in IMG/M
3300025926|Ga0207659_10102487Not Available2161Open in IMG/M
3300025928|Ga0207700_11988041Not Available508Open in IMG/M
3300025929|Ga0207664_10786980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia856Open in IMG/M
3300025929|Ga0207664_11485280Not Available599Open in IMG/M
3300025937|Ga0207669_10109131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1850Open in IMG/M
3300025972|Ga0207668_10572115All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia981Open in IMG/M
3300025981|Ga0207640_10021267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3865Open in IMG/M
3300025986|Ga0207658_10309990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1363Open in IMG/M
3300027080|Ga0208237_1070131All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300027371|Ga0209418_1104379Not Available508Open in IMG/M
3300027609|Ga0209221_1134387Not Available622Open in IMG/M
3300027853|Ga0209274_10165063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1119Open in IMG/M
3300027894|Ga0209068_10985778Not Available501Open in IMG/M
3300028380|Ga0268265_12363757Not Available538Open in IMG/M
3300028536|Ga0137415_11038338Not Available632Open in IMG/M
3300029951|Ga0311371_11871871Not Available644Open in IMG/M
3300029951|Ga0311371_12569770Not Available515Open in IMG/M
3300030007|Ga0311338_10155740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2710Open in IMG/M
3300030007|Ga0311338_11889485Not Available534Open in IMG/M
3300030058|Ga0302179_10531100Not Available516Open in IMG/M
3300030494|Ga0310037_10123805Not Available1187Open in IMG/M
3300030503|Ga0311370_11275962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia788Open in IMG/M
3300030520|Ga0311372_12585381Not Available567Open in IMG/M
3300030520|Ga0311372_12856106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia528Open in IMG/M
3300030524|Ga0311357_10433201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1235Open in IMG/M
3300030580|Ga0311355_11741180Not Available530Open in IMG/M
3300031027|Ga0302308_10277966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300031028|Ga0302180_10340057Not Available763Open in IMG/M
3300031199|Ga0307495_10138711Not Available618Open in IMG/M
3300031234|Ga0302325_11285270Not Available964Open in IMG/M
3300031236|Ga0302324_101393359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia918Open in IMG/M
3300031544|Ga0318534_10186142All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300031545|Ga0318541_10669333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica580Open in IMG/M
3300031549|Ga0318571_10299315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica604Open in IMG/M
3300031561|Ga0318528_10662019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica559Open in IMG/M
3300031681|Ga0318572_10603136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica654Open in IMG/M
3300031740|Ga0307468_101484991Not Available627Open in IMG/M
3300031765|Ga0318554_10048430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2321Open in IMG/M
3300031793|Ga0318548_10596804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica537Open in IMG/M
3300031796|Ga0318576_10523274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica559Open in IMG/M
3300031797|Ga0318550_10548444All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031845|Ga0318511_10081308All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300031910|Ga0306923_11122605Not Available845Open in IMG/M
3300031946|Ga0310910_10141603All Organisms → cellular organisms → Bacteria1832Open in IMG/M
3300031981|Ga0318531_10244668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica810Open in IMG/M
3300032043|Ga0318556_10620078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica564Open in IMG/M
3300032091|Ga0318577_10245377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica857Open in IMG/M
3300032160|Ga0311301_10215881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3247Open in IMG/M
3300032160|Ga0311301_12620474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. T1317-0309558Open in IMG/M
3300032770|Ga0335085_11260506Not Available782Open in IMG/M
3300032828|Ga0335080_10487202Not Available1311Open in IMG/M
3300032892|Ga0335081_12628242Not Available516Open in IMG/M
3300033134|Ga0335073_10756695Not Available1051Open in IMG/M
3300033134|Ga0335073_11382311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica689Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.52%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.52%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.40%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.40%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.40%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.72%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.04%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.04%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.04%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.04%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.36%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.36%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.68%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024275Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15EnvironmentalOpen in IMG/M
3300024295Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027080Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FD1_000227602170459024Grass SoilALGWLSDYRYVTQRTSWGYWKPVAEGMLTACKDGTTGEITTWTWGHRTITIPCSRLRR
JGI12635J15846_1013570513300001593Forest SoilLACVLALGWLSDYRYVTEHSTWGYWVPRADRMLAACERSTSGDITTWTWNRGRITIPCSHLRR*
JGI12627J18819_1032348013300001867Forest SoilARQRRQASAEGGDGNALTRKPPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR*
JGI26341J46601_1007792923300003219Bog Forest SoilPLLRQSPWALAVVAALVCVLALGWLSDYRYVTGRVSPWGHWEPTAEKMLAACEHSASGEITTWTWYHRTITIPCSRLRR*
Ga0062389_10333316513300004092Bog Forest SoilVAVDARLRRQAIAGGGDRIPLVRPSPWALTAVAALACVLALGWGSDYRYATERTSPWGYWKPTAEHMLTACEHSTSGQITGWAWGQGTITIPCSRLRR*
Ga0062386_10109967013300004152Bog Forest SoilVLALGWLSDYRYVTGRVSPWGHWEPTAEKMLAACEHSASGEITTWTWYHRTITIPCSRLRR*
Ga0062595_10130060113300004479SoilLDYRYATQRMFWGHWQPVAERMLTACEHSTSDTITTWTWGNTTITIPCSRLHR*
Ga0066683_1066799113300005172SoilACVLALSWVLDYRYVTQRMFWGHWQLVAGRMLTACEHSTSGTITTWTWGHSTITIPCSRLRR*
Ga0066811_102979923300005185SoilQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITIPCSRLHR*
Ga0068869_10008968713300005334Miscanthus RhizosphereLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR*
Ga0070666_1110415213300005335Switchgrass RhizosphereRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR*
Ga0070674_10008912533300005356Miscanthus RhizosphereCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITIPCSRLHR*
Ga0070703_1017953523300005406Corn, Switchgrass And Miscanthus RhizosphereAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR*
Ga0070709_1009729833300005434Corn, Switchgrass And Miscanthus RhizosphereLACVLALSWVLDYRYVTQRMFWGHWPTVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHR*
Ga0070709_1040661733300005434Corn, Switchgrass And Miscanthus RhizosphereQRMFWGHWQPVAERMLTACEHSTTGTITTWTWGHSTITIPCSRLHG*
Ga0070709_1081730113300005434Corn, Switchgrass And Miscanthus RhizospherePRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR*
Ga0070713_10052830923300005436Corn, Switchgrass And Miscanthus RhizosphereDYRYVTQRMFWGHWQPVAERMLTACEHSTTGTITTWTWGHSTITIPCSRLHG*
Ga0070711_10188908023300005439Corn, Switchgrass And Miscanthus RhizosphereLACVLALSWVLDYRYVTQRRFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLHR*
Ga0070705_10095017213300005440Corn, Switchgrass And Miscanthus RhizosphereAALACVLALGWLSDYRYVTQRTSWGYWKPVAERMLTACKDSTTGEITTWTWGHSTITIPCSQLRR*
Ga0070706_10110572213300005467Corn, Switchgrass And Miscanthus RhizosphereLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR*
Ga0070707_10041616123300005468Corn, Switchgrass And Miscanthus RhizosphereAAALACVLALGWLSDYRYVTQRTSWGHWKPVAERMLTACEHSTTGEITTWTWGHRTITISCSRLRR*
Ga0070686_10059398323300005544Switchgrass RhizosphereLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTTGTITTWTWGHSTITIPCSRLHR*
Ga0070695_10121420313300005545Corn, Switchgrass And Miscanthus RhizosphereLALSWVLDYRYVTQRRFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLHR*
Ga0070761_1021023823300005591SoilRQAGPGGGDRIPLVRLSRGALAAVVALVCVLALGWFSDYRYVTERTTWGHWKSQAERMLAACEDSSTGEITTWTWYHKTITIPCSRLRR*
Ga0070762_1013258613300005602SoilRRQAIAGGGGRIPLVRRSPGALAAVAALVCVLAFGWFSDYRYVTERTWWGYWKPTAERMLAACEDSATGEITTWTWYHKTITIPCSRLRR*
Ga0070764_1017881613300005712SoilAALVCVLAFGWFSDYRYVTERTWWGYWKPTAERMLAACEDSATGEITTWTWYHKTITIPCSRLRR*
Ga0070766_1033302423300005921SoilAYLRRQAIAGGGDRIPLVRRSPGALAAVAALVCVLAFGWFSDYRYVTERTWWGYWKPTAERMLAACEDSATGEITTWTWYHKTITIPCSRLRR*
Ga0075029_10016752513300006052WatershedsALAAVAALACVLALGWLSDYRYVTGHNFWGHWKPVAERMLTACEHSTTGEITTWTWGHSTITIPCSRLRR*
Ga0075019_1098461213300006086WatershedsAVAALACVLALGWVSDYRYVTGHNFWGHWKPVAERMLTACEHSTTGEITTWTWGHSTITIPCSRLRR*
Ga0075030_10068042213300006162WatershedsRIPLVRQSPWALTAVATLACVLALGWLSDYRYVTERTSPWGYWKPTAEKMLTACEHSTSGQITGWAWGQGTITIPCSRLRR*
Ga0070716_10019808823300006173Corn, Switchgrass And Miscanthus RhizosphereAAAVLACVLALSWVLDYRYVTQRMFWGHWPTVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHR*
Ga0074050_1170169323300006577SoilVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHR*
Ga0074054_1211187823300006579SoilLRQASAEGGDRNALIRTSPRALAAVAVLACVLALSWVLDYRYVTQRMFWGHWQPAAERMLTACERSTSGTITTWTWGHSTITIPCSRLHR*
Ga0074057_1231373023300006605SoilARLRQASSEGGDSNALICKSPRALAAAAVLTCVLALSWVLDYRYVTQRMFWGHWQPAAERMLTACERSTSGTITTWTWGHSTITIPCSRLHR*
Ga0075433_1008578033300006852Populus RhizosphereQRRQASAEGGDSNALIRTSPRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR*
Ga0073928_1045327023300006893Iron-Sulfur Acid SpringGDRIPLVRQSPRVLAAVAALACVLALGWLSDYRYVTEHKFWGHWKPRAEQLLAACEHSTTGEITTWTWGHRTITIPCSRLRR*
Ga0105251_1004051233300009011Switchgrass RhizosphereGARQRRQASAEGGGSNALTRSSPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR*
Ga0075423_1093817013300009162Populus RhizosphereYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR*
Ga0105242_1012969813300009176Miscanthus RhizosphereRQASAEGGDRNALIRKSPRALAAVAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR*
Ga0116214_118371213300009520Peatlands SoilLVRQSPRALAAVAALACVLALGWLSDYRYVTGHNFWGHWKPVAERMLTACEHSTTGEITTWTWGHSTITIPCSRLRR*
Ga0105237_1273630913300009545Corn RhizosphereLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR*
Ga0105238_1162313323300009551Corn RhizosphereVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLHR*
Ga0116133_106222913300009623PeatlandPRVVAAITALACVLTLGWISDYRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGTITIPCSNLRR*
Ga0116135_131209823300009665PeatlandEKLPLVRQSPQVIAVVTALACVLALGWLSDFRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGTITIPCSNLRR*
Ga0116217_1083659813300009700Peatlands SoilERTSPWGYWKPTAERMLTACEHSTSGQITGWAWGQGAITIPCSRLRR*
Ga0136449_10090289913300010379Peatlands SoilQAIAGGGDRIPLVRQSPRALAAVAALACVLALGWLSDYRYVTGHNFWGHWKPVAERMLTACEHSTTGEITTWTWGHSTITIPCSRLRR*
Ga0136449_10244907333300010379Peatlands SoilATERTSPWGYWKPTAERMLTACEHSTSGQITGWAWGQGAITIPCSRLRR*
Ga0134121_1306386923300010401Terrestrial SoilAAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR*
Ga0126361_1016285813300010876Boreal Forest SoilVAALTCVLAFGWVSDYRYITGHNFWGHWKPTAERMLAACEHSTSGEITTWTWGHSTITIPCSRLRR*
Ga0137382_1053793623300012200Vadose Zone SoilAVAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGKITTWTWGHSTITIPCSRLHR*
Ga0137399_1072357923300012203Vadose Zone SoilGGGKIPLVRQSPWALTAVAALACVLALGWLSDYRYVTQRTSWGYWKPVAERMLTACKDSTTGEITTWTWGPSTITIPCSQLRR*
Ga0137413_1039912923300012924Vadose Zone SoilGDRIPLVRQSPWALTAVAALACVLALGWLSDYRYVTQRTSWGYWKPVAERMLTACKDSTTDEITTWTWGPSTITIPCSQLRR*
Ga0137419_1188783613300012925Vadose Zone SoilRYVTQRTSWGYWKPVAERMLTACKDSTTGEITTWTWGPSTITIPCSQLRR*
Ga0164300_1053418913300012951SoilLTRSSPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHR*
Ga0164303_1027745113300012957SoilRQRRQASAEGGDSNALIRTSPRALAAAAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR*
Ga0164301_1024659213300012960SoilCVLALSWVLDYRYVTQRMFWGHWPTVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHR*
Ga0157378_1078710113300013297Miscanthus RhizosphereGHALIRTPPRALAAAAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR*
Ga0181531_1057832123300014169BogMAAGGERLPLVRQSPRVVAAVTALACVLALGWLSDFRYGTEHSFWGYWRPRAEHMLAVCERSTSGEITTWTWNKGRITIPCSNLRR*
Ga0181537_1103450613300014201BogRQASAEGVNRIVPLIRRSPRALAAVTALACVLAIGWLPDYRYVTPRITWGHWQPAAERMLTACEHSTTGTITTWTWYHRTITIPCSQLRR*
Ga0182036_1171561813300016270SoilRRSPGALADAALACVLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0182033_1154836313300016319SoilAALACVLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0182034_1206514213300016371SoilMTAAAVIAVDACLRRHASTGGGSNLFLRRSPGALAAVAVLACVLTLGWLPDYRYLAGHNWWGYWRPVAERMLTACQHSTSGQITTWTWGNRRITLPCSQLRS
Ga0182037_1121285223300016404SoilAYLRRQAIGGGGDRIPLVRRSPGALAAAALACVLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0182038_1031859513300016445SoilYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0187820_107243413300017924Freshwater SedimentAVLACALALGWLPDYRYATPRTRPWGYWQPVAQRMLTACEHSTSGDITTWTWGHAKITIPCSRLHR
Ga0187847_1031838413300017948PeatlandAGGDRLPLLRQSPRVVAVITALACVLALGWISDYRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGRITIPCSNLRR
Ga0187815_1026807713300018001Freshwater SedimentLRRQAIAEGGARIPLVRQSLGALTAVAALACVLALGWLSDYRYVTGHNFWGHWKPVAERMLAACEHSTSGEITTWTWGHSTITIPCSQLRR
Ga0187863_1074666213300018034PeatlandDRLPLLRQSPRVVAVITALACVLALGWISDYRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGRITIPCSNLRR
Ga0187887_1086130223300018043PeatlandPLLRQSPRVVAAVTALACVLALGWLSDFRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGRITIPCSNLRR
Ga0066667_1084205313300018433Grasslands SoilLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITIPCSRLHR
Ga0066667_1150548313300018433Grasslands SoilGGDRKALIRKSPRALAVVAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLRR
Ga0179592_1018142313300020199Vadose Zone SoilDYRYVTQRTSWGYWKPVAERMLTACKDSTTDEITTWTWGPSTITIPCSQLRR
Ga0210400_1072189513300021170SoilQAIAGGGDRIPLVRQSPWALTAVAALICVLALGWLSDFRYVTQRTSWGYWKPVAERMLTACEHSTSGEITTWTWGERTITIPCSRLRR
Ga0210396_1139244313300021180SoilVAVAVLVCVLAVGWVSDYRYLTERIAWGHWEPKAEQMLTTCQHSTSGTITTWTWGKGHITIPCSRLRG
Ga0210388_1106909623300021181SoilAGGGDRIPLVRQSPWALTAVAALACVLAFGWLSDFRYVTQRTSWGYWKPVAERMLTACEHSTSGEITTWTWGERTITIPCSRLRR
Ga0210385_1083769423300021402SoilDAYLRRQAGAEGGYRILPLIRTSPRALAAVIALACVLALGWLPDYRYVTQRNFWGHWRPVAERMLTTCEHSTTGTITTWTWYHRTITIPCSQLRR
Ga0210397_1060406623300021403SoilQAVAGGGDRIPLVRQSPWALTAVAALACVLAFGWLSDFRYVTQRTSWGYWKPVAERMLTACEHSTSGEITTWTWGERTITIPCSRLRR
Ga0210387_1135273513300021405SoilRQSPWALTAVAALICVLALGWLSDFRYVTQRTSWGYWKPVAERMLTTCEHSPSGEITTWTWGQRTITIPCSQLRR
Ga0210384_1070518423300021432SoilAAAALACVLALGWLSDYRYVTQRTSWGHWKPVAERMLTACEHSTSGEITTWTWGHRTITISCSRLRR
Ga0210410_1085196113300021479SoilTSWGHWKPVAERMLTACEHSTSGEITTWTWGHRTITIPCSRLRR
Ga0242665_1035003613300022724SoilALTAVAALTCVLVLGWLSDYRYVTERTSWGNWKPVAERMLTACEHSTSGEITTWTWGRSRITIPCSRLRG
Ga0247661_101197413300024254SoilLIRTSPRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0247674_104279313300024275SoilSAEGGDSNALIRTSPRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0224556_118158913300024295SoilAVVTLACVLTLGWVTDYRYAATERMAWGHWQPKAERMLTACEHSSSGEITTWAWGKGTITVPCSRLRR
Ga0247666_105530913300024323SoilNALTRSSPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0247678_101412523300024325SoilVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGVITTWTWGHSTITLPCSRLHR
Ga0247668_105752613300024331SoilAVDARQRRQASAEGGDSNALIRTSPRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0207713_117220723300025735Switchgrass RhizosphereRAFAAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0207647_1021212213300025904Corn RhizosphereTPPRALAAVAVLACVLALSWILDYRYVTQRRFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR
Ga0207699_1074126013300025906Corn, Switchgrass And Miscanthus RhizosphereYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITIPCSRLHG
Ga0207671_1045764213300025914Corn RhizosphereAAAVLACVLALSWVLDYRYVTQRMFWGHWPSVAERMLTACEHSTNGTITTWTWGHSTITLPCSRLHR
Ga0207693_1081141523300025915Corn, Switchgrass And Miscanthus RhizosphereVTQRMFWGHWQPVAERMLTACEHSTTGTITTWTWGHSTITIPCSRLHG
Ga0207662_1065609623300025918Switchgrass RhizosphereAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGAITTWTWGHSTITLPCSRLHR
Ga0207659_1010248713300025926Miscanthus RhizosphereRRFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLHR
Ga0207700_1198804113300025928Corn, Switchgrass And Miscanthus RhizosphereTAVAALTCVLALGWLSDYRYVTQRTSWGNWKPVAERMLTACEPSTSGEITTWTWGRSRITIPCSRLRR
Ga0207664_1078698013300025929Agricultural SoilRRQASAEGDSNARIRKPPRALAAAAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTTGTITTWTWGHSTITIPCSRLHG
Ga0207664_1148528013300025929Agricultural SoilLIRKPPRALAAAAVLACVLALSWVLDYRYVTQRMFWGHWQTVAERMLTACEHSTSGTITTWTWGNSTITIPCSRLHK
Ga0207669_1010913113300025937Miscanthus RhizosphereQRRQASAEGGDGNALTRKPPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITIPCSRLHR
Ga0207668_1057211523300025972Switchgrass RhizosphereVDARLHRQASAEGGDRNALIRKSPRALAAVAVLACVLALSWVLDYRYVTQRRFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLHR
Ga0207640_1002126713300025981Corn RhizosphereLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR
Ga0207658_1030999013300025986Switchgrass RhizosphereCVLALSWVLDYRYVTQRRFWGHWQPVAERMLTACEHSSSDTITTWTWGNSTITIPCSRLH
Ga0208237_107013113300027080Forest SoilRVRLAARSPRALIAVAVLVCVLAVGWVSDYRYLTERIAWGHWEPKAEQMLTTCQHSTSGTITTWTWGKGHITIPCSRLRG
Ga0209418_110437913300027371Forest SoilEGGDGNALTRKPPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSASGTITTWTWGHSTITLPCSRLHR
Ga0209221_113438713300027609Forest SoilRIPLIRRSPGALAAVAALVCVLALGWFSDYRYVTERTWWGYWKPTAESMLAACEKSTTGEITTWTWYHKTITIPCSRLRR
Ga0209274_1016506323300027853SoilRQAGPGGGDRIPLVRLSRGALAAVVALVCVLALGWFSDYRYVTERTTWGHWKSQAERMLAACEDSSTGEITTWTWYHKTITIPCSRLRR
Ga0209068_1098577813300027894WatershedsLVRPSPWALTAVAALACVLALGWGSDYRYATERTSPWGYWKPTAEHMLTACEHSTSGQITGWAWGQGTITIPCSRLRR
Ga0268265_1236375713300028380Switchgrass RhizosphereLTRSSPRAFAAAAVLVCVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGHSTITLPCSRLHR
Ga0137415_1103833813300028536Vadose Zone SoilWVLDYRYVTQRMFWGHWQPVAERMLTACERSTSGTITTWTWGNSTITIPCSRLHR
Ga0311371_1187187113300029951PalsaVDAYLRRQAMAQGGEPIPLLRQSPRVVAAVTALACVLALGWLSDFRYGTEHSYWGYWRPRAEHMLAVCERSTSGEITTWTWYKGRITIPCSNLRR
Ga0311371_1256977023300029951PalsaPLVRQPPRVVAAVTALACVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0311338_1015574013300030007PalsaVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0311338_1188948523300030007PalsaGADGIRLVRRSPGAFLTVVALACVLAVGWLPDYRYGTEHSYWGYWRPEAARMLAACERSTSGDITTWTWYRGRITIPCSHLRK
Ga0302179_1053110013300030058PalsaLACVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0310037_1012380513300030494Peatlands SoilDRIPLVRQSPGALAVVAALACVLALGWGSDYRYATERTSPWGYWKPTAERMLTACEHSTSGQITGWAWGQGTITIPCSRLRR
Ga0311370_1127596223300030503PalsaGTGPVPLIRQSARVVAVVVALACVLGLGWLSDFRYGTEHSFWGYWRPHAERMLRVCDRSTTGEITTWTWYRGRITIPCSHLRR
Ga0311372_1258538123300030520PalsaPLVRLSRGALAAVVALVCVLALGWLSDYRYVTERTTWGYWKPQAERMLAACEDSTTGEITTWTWYHKTITIPCFRLRR
Ga0311372_1285610623300030520PalsaAAAVVAVDAFLRRQAVGTGPVPLIRQSARVVAVVVALACVLGLGWLSDFRYGTEHSFWGYWRPHAERMLRVCDRSTTGEITTWTWYRGRITIPCSHLRR
Ga0311357_1043320113300030524PalsaVTALACVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0311355_1174118023300030580PalsaVAVDAYLRRHGVAEGGEPVPLVRQPPRVVAAVTALACVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0302308_1027796613300031027PalsaALACVLALGWLSDFRYGTEHSYWGYWRPRAERMLRVCERSTSGEITTWTWYRGRITIPCSHLRR
Ga0302180_1034005713300031028PalsaAEGGEPVPLVRQPPRVVAAVTALACVLALGWLSDYRYGTEHSYWGYWPPRAERMLARCERSTSGEITTWTWYHGRITIPCSRLRR
Ga0307495_1013871113300031199SoilAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGKITTWTWGHSTITIPCSRLRR
Ga0302325_1128527013300031234PalsaGGGDRIPLVRLSRGALAAVVALVCVLALGWLSDYRYVTERTTWGYWKPQAERMLAACEDSTTGEITTWTWYHKTITIPCFRLRR
Ga0302324_10139335923300031236PalsaAVGTGPVPLIRQSARVVAVVVALACVLGLGWLSDFRYGTEHSFWGYWRPHAERMLRVCDRSTTGEITTWTWYRGRITIPCSHLRR
Ga0318534_1018614213300031544SoilMVAVAAGLRRQAIAGGGERIPLVRRSPWALAAAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0318541_1066933313300031545SoilAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0318571_1029931513300031549SoilAMVAVAAGQRRQAIAGGGERIPLVRRSPWALAAAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0318528_1066201923300031561SoilAGLRRQAIAGGGERIPLVRRSPWALAAAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0318572_1060313613300031681SoilGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWGRSKITIPCSQLRR
Ga0307468_10148499113300031740Hardwood Forest SoilRTPPRALAAVAVLACVLALSWVLDYRYATQRRFWGHWQPVAERMLTACEHSTSHTITTWTWGNTTITIPCSRLHR
Ga0318554_1004843013300031765SoilRIPLVRRSPWALTAAALVCVLALGWLSDYRYVTQRTSWGNWKPVAERMLTACQHSTTGEITTWTWGRSKITIPCSQLRR
Ga0318548_1059680413300031793SoilGWLSDYRYVTQRTSWGNWKPVAERMLTACQHSTTGEITTWTWGRSKITIPCSQLRR
Ga0318576_1052327423300031796SoilPWALAAAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0318550_1054844423300031797SoilVDAYLRRQAIGGGGDRIPLVRRSPGALAAAALACVLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0318511_1008130833300031845SoilNWWGYWKPVAERMLTACQHSTTGEITTWTWGRSKITIPCSQLRR
Ga0306923_1112260523300031910SoilLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0310910_1014160343300031946SoilHNWWGYWKPVAERMLTACQHSTTGEITTWTWSHRTITIPCSRLRR
Ga0318531_1024466813300031981SoilGGGDRIPLVRRSPGALAAAALACVLALGWLSDYRYVTEHNWWGYWKPVAERMLTACQHSTTGEITTWTWGRSKITIPCSQLRR
Ga0318556_1062007813300032043SoilAAAALVCVLALGWLSDFRYVTQRTSWGHWKPVAERMLTACKDSPTGEITTWTWGGRITIPCSQLRR
Ga0318577_1024537723300032091SoilLVRRSPWALAAAALICVLALGWLSDFRYVTQRTSWGRWKPVAERMLTACQDSATGEITTWTWERKTITIPCSQLRR
Ga0311301_1021588113300032160Peatlands SoilATERTSPWGYWKPTAERMLTACEHSTSGQITGWAWGQGAITIPCSRLRR
Ga0311301_1262047413300032160Peatlands SoilARLRRQAIAGGGDRIPLVRQSPRALAAVAALACVLALGWGSDYRYATERTSPWGYWKPTAEHMLTACEHSTSGQITGWAWGQGTITIPCSRLRR
Ga0335085_1126050623300032770SoilPRVLTAVAALACVLALGWLSDYRYVTQRTSWGYWKPVAERMLTACQDSTTGEITTWTWGHSTITIPCSRLRG
Ga0335080_1048720233300032828SoilGWLSDYRYVTQRTSWGYWKPVAERMLTACQDSTTGEITTWTWGHSTITIPCSRLRG
Ga0335081_1262824223300032892SoilPLARPSPRALTAVAALAGVLALGWLSDYRYVTQRTSWGYWKPVAERMQTACQDSTTGEITTWTWGHTTITIPCSRLRG
Ga0335073_1075669513300033134SoilIRTSPRALAAAAVLACVLALSWVLDYRYVTQRMFWGHWQPVAERMLTACEHSTSGTITTWTWGRSTITIPCSRLHR
Ga0335073_1138231113300033134SoilRSPWALTAAAALVCVLALGWLSDFRYVTQRTSWGHWKPVAERMLTACKDSPTGEITTWTWGGRITIPCSQLRR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.