Metagenome Family F048624

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048624
Family Type	Metagenome
Number of Sequences	148
Average Sequence Length	37 residues
Representative Sequence	IQNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICL
Number of Associated Samples	21
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.05 %
% of genes from short scaffolds (< 2000 bps)	2.70 %
Associated GOLD sequencing projects	16
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (97.297 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.03% β-sheet: 0.00% Coil/Unstructured: 53.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF13412	HTH_24	1.35
PF05064	Nsp1_C	0.68
PF06268	Fascin	0.68
PF00078	RVT_1	0.68
PF15396	FAM60A	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
All Organisms	root	All Organisms	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
cellular organisms	root	All Organisms → cellular organisms	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.30 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002507\|JGI24697J35500_10897259	Not Available	805	Open in IMG/M
3300002509\|JGI24699J35502_10731115	Not Available	797	Open in IMG/M
3300009784\|Ga0123357_10241176	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1957	Open in IMG/M
3300009826\|Ga0123355_10347386	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1969	Open in IMG/M
3300010167\|Ga0123353_10343337	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	2254	Open in IMG/M
3300010882\|Ga0123354_10160956	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002504	Neocapritermes taracua P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P4	Host-Associated	Open in IMG/M
3300002507	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P1	Host-Associated	Open in IMG/M
3300002509	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Mp193P4	Host-Associated	Open in IMG/M
3300002552	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1	Host-Associated	Open in IMG/M
3300002834	Cornitermes sp. P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P4	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010167	Labiotermes labralis P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P3	Host-Associated	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010882	Labiotermes labralis P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P4	Host-Associated	Open in IMG/M
3300027864	Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_107799691	3300001544	Termite Gut	KKKKKVTRKLKSGGLHEKHVVATWKRGNHLSICM*
JGI20164J26629_102521461	3300002127	Termite Gut	KYEKKVTRKFKSGGLHEKHVVATWKLGNHLRIRL*
JGI20166J26741_118196372	3300002175	Termite Gut	MKKERKKKKVTRKFKSGGLHERHVVATWKLGNHLSIRL
JGI20166J26741_119006703	3300002175	Termite Gut	MEKKKKVTRKFKSGGLHERHVVATWKLGNHLSIRL
JGI20166J26741_122652981	3300002175	Termite Gut	KKKKKKVTRKFKSGGLHEKHVVATWKLGNYLNIRF*
JGI20163J26743_103736373	3300002185	Termite Gut	KKKKKKVTRKFKLGRLQEKHVVATWKVGNHLSIRL*
JGI20163J26743_103916171	3300002185	Termite Gut	KYEKKKKVTRKFKSGGLHERHAVATWKLGNHLSIRL*
JGI20163J26743_107492462	3300002185	Termite Gut	KKKKKKVTRKFKAGGLHEKHVVATWKLGNHLSICL*
JGI20163J26743_107744642	3300002185	Termite Gut	KKKKKVTRKFKSGGLHEKHVVATWKLGNHLSIRL*
JGI20163J26743_107968551	3300002185	Termite Gut	KKKKKVTRKFKSGGLYERHVVTTWKLGNHLSIRL*
JGI20163J26743_110999013	3300002185	Termite Gut	MKRKKKKVTRKFKSGGLHEKHVVATWKLGNHLSIRL
JGI20163J26743_112484681	3300002185	Termite Gut	MYTNMKKKVTRKFKSGGLQEKHVVATWKLGNHLSIRL*
JGI20163J26743_114346594	3300002185	Termite Gut	YIYINKKKVTRKFKSGGLYEKHVVATWKLGNHLSICL*
JGI20163J26743_115203205	3300002185	Termite Gut	KKKKKVTRKFKSGGLHEKHVVATWKLGNHLRICL*
JGI20163J26743_115266541	3300002185	Termite Gut	IFKKKKVTRKFKSGGLHEKHVVETWKLGNHLSIRL*
JGI24705J35276_119000541	3300002504	Termite Gut	TCKQNMKLVTDKFRFKLGGLHEKHVVATWNLGSHLSIGL*
JGI24697J35500_104486621	3300002507	Termite Gut	MAVVILPCIQNMKLVTNKFKPGGLHEKHVVATWNLGNHLS
JGI24697J35500_105747821	3300002507	Termite Gut	GSGYFTCIQNMQLVNNKFKSVGLHEKHVVATWNLGNYLIICI*
JGI24697J35500_108371971	3300002507	Termite Gut	NMKLVTNKFKSGGLHEKHVVATWNLGNHLSICLLSKQSA*
JGI24697J35500_108972592	3300002507	Termite Gut	MKLVTNKFKMGGLHEKHVVATWNVGNHLSICLQTQGNQEKPVS
JGI24699J35502_107311151	3300002509	Termite Gut	MKLVTNKFKMGGLHEKHVVATWNVGNHLSICLQTQGNQEKPV
JGI24699J35502_108786181	3300002509	Termite Gut	FTCIQNMKLVTTEFKSGGLHEKHVVATWNLGNHLAICFI*
JGI24694J35173_101793782	3300002552	Termite Gut	SGYFTCKQNNKLVATKFKSGGLNEKHVVATWNLGNRLRICL*
JGI24694J35173_107595181	3300002552	Termite Gut	KQNMKLFTTKFKSGGLHEKHVVATWNLGNHLSIIKLVDISV*
JGI24696J40584_124134941	3300002834	Termite Gut	CIQNMKSVTTKFKSGGLHEKHVVATWNLGNRLIYKLCVS*
Ga0082212_106152702	3300006045	Termite Gut	KQNMKLVNDKFRFKSGGLHEKHVVETWILGSHLSICLI*
Ga0082212_110209351	3300006045	Termite Gut	MKLVNDKFRFKSGGLHEKHVVATGNVGSHLSICLK
Ga0082212_112553801	3300006045	Termite Gut	CKQNMKLVTAKFKLKSVGLHEKHVVATWNVGSHLSICL*
Ga0123357_102411761	3300009784	Termite Gut	MKLVTTEFKSGGLHEKHVVATWNLGNHLSICFWAQGNQEKPVSRWPV
Ga0123357_102937972	3300009784	Termite Gut	SGYFTCIQNMKLVTTKFKSGGLHEKHVVATWNLGNHLSICL*
Ga0123357_103056431	3300009784	Termite Gut	SGYFTCKQNMKLVTTKFKSGGLHEKHVVATWNVGNHLSISL*
Ga0123357_104021321	3300009784	Termite Gut	IQNMKSVTTKFKSGGLHEKHVVATWNLGNHLSICF*
Ga0123357_104843931	3300009784	Termite Gut	QNMKLVTTKFKSGGLHEKHVVATWNLGNHLSISF*
Ga0123357_105697491	3300009784	Termite Gut	VLSHDGCGYFTCIQNMKLVTNKFKSVGLHEKHVVATWNLGNHFSIC
Ga0123357_108850471	3300009784	Termite Gut	QNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123355_1001593214	3300009826	Termite Gut	MKLVTTKFKSGGLHEKHVVATWNLGNHLSICFWAQGNQEK
Ga0123355_101000031	3300009826	Termite Gut	QNMKSVTTKFKSGGLHEKHVVATWNVGNHLSICF*
Ga0123355_102262945	3300009826	Termite Gut	TCKQNMKLVTTKFKSGGLHEKHVVATWNVGNRLSICF*
Ga0123355_103473863	3300009826	Termite Gut	MKLVTTEFKSGGLHEKHVVATWNLGNHLSICFWAQGNQEK
Ga0123355_103518724	3300009826	Termite Gut	YIQNMKLVTTKFKSGGIHEKHVVATWNVGNRLSVRL*
Ga0123355_103717843	3300009826	Termite Gut	MKLVTTKFKSGGLHEKHVVATWNVGNHLSICFWSRE
Ga0123355_104731331	3300009826	Termite Gut	RNMNSVTTKFKSGGLHEKHVVATWNVGNHLSICF*
Ga0123355_105390491	3300009826	Termite Gut	IQNMKLVTNKFKSGGLHEKHVVATWNLGNHLSVCF*
Ga0123355_106036521	3300009826	Termite Gut	IQNMKLVTNKFKSAGLHEKHVVATWNLGNRLSICL*
Ga0123355_106293151	3300009826	Termite Gut	MKLVTTKFKSGGLHEKHVVATWNVGNHLSICFWAQG
Ga0123355_106628031	3300009826	Termite Gut	IQNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123355_107599991	3300009826	Termite Gut	QNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICF*
Ga0123355_108962121	3300009826	Termite Gut	TYIQNMKLVATKFMSGGLHEKHVVATWNLGNHLSICF*
Ga0123355_111218362	3300009826	Termite Gut	MKLCNTKFKSGGLHEKHVVATWNLGNHLSICFWAQGNQE
Ga0123355_111353811	3300009826	Termite Gut	CIQNMKLVTTKFKSGGLHEKHVVATWNLGNHLSICF*
Ga0123355_111443641	3300009826	Termite Gut	IQNMKLVTTKFKSGGLHEKHVVATWNLGNHLSICL*
Ga0123355_111766853	3300009826	Termite Gut	GYFTCKQNMKLVTTKFKSGGIHEKHVVATWNVGNRLSICL*
Ga0123355_112894281	3300009826	Termite Gut	SQQSGIMKLVTTKFKSGGLHEKHVVATWNLGNHLSICL*
Ga0123355_121079041	3300009826	Termite Gut	VLSHDGCGYFTCIQNMKLVTNKFKSVGLHEKHVVATWNLG
Ga0123355_121577081	3300009826	Termite Gut	TCKQDMKLVTNKFKSGGLHEKHVVATWNVGNHLSVCL*
Ga0123356_102985551	3300010049	Termite Gut	KQNKKLVTTKFKSGGLHEKLVVATWNLGNHLSICF*
Ga0123356_108424381	3300010049	Termite Gut	KQNMKLVTTKFKSGGLHEKHVVATWNLGNHLKICF*
Ga0123356_108848973	3300010049	Termite Gut	MKLVTTKFKSEGLHEKHVVATWNLGNHLSICFWAQGNQEK
Ga0123356_121020031	3300010049	Termite Gut	MKFVTNKFKSGGLREKHVVATWNLGNHLSICFWAQGYQ
Ga0123356_137671511	3300010049	Termite Gut	MKLVTTKFKSGGLHEKHVVATWNLGNHLSICFWAQGN
Ga0123356_140139471	3300010049	Termite Gut	TCIQNMKLVTTKFKSGGLHEKHVVATWNLGNHLSICL*
Ga0131853_101089065	3300010162	Termite Gut	GYFTCIQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_101764701	3300010162	Termite Gut	KQNMKLVTTRFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_102014042	3300010162	Termite Gut	CKQNMKLVTTRFKSGGLHEKHVVATWNVGNRLSICL*
Ga0131853_103390911	3300010162	Termite Gut	GYFTCKQNMKLVTTRFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_103977051	3300010162	Termite Gut	YFTCIQNMKSATNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0131853_104735881	3300010162	Termite Gut	QNMKLVTNKFKSGGLHEKHVVATGNVGNHLSICL*
Ga0131853_105235701	3300010162	Termite Gut	YFTCIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_105700801	3300010162	Termite Gut	QNMKLVTARFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_106914321	3300010162	Termite Gut	SPASKVRTAIQNMKLVTNKFKSRGLHEKHVVATWNVGNHLSVCL*
Ga0131853_107609001	3300010162	Termite Gut	GSGYFTCKQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSISL*
Ga0131853_108061351	3300010162	Termite Gut	KQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_108402361	3300010162	Termite Gut	TCIQNMKLVTYKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_108544551	3300010162	Termite Gut	IQNMKSVTTEFKSGGLHEKHVVATWNVGNRLSVSL*
Ga0131853_108834751	3300010162	Termite Gut	IQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_109029251	3300010162	Termite Gut	TCKQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0131853_109779711	3300010162	Termite Gut	CIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_110272601	3300010162	Termite Gut	CIQNMKLVTNKVKSVGLHEKHVVATLNVGNHLSICL*
Ga0131853_110499971	3300010162	Termite Gut	IQNMKLVTTEFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0131853_110698701	3300010162	Termite Gut	KQNMKLVTTRFKSGGLHEKHVVATWNVGNRLSVC*
Ga0131853_110850141	3300010162	Termite Gut	IQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_111066552	3300010162	Termite Gut	CIQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_111163222	3300010162	Termite Gut	TCIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_113463591	3300010162	Termite Gut	CIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0131853_113781131	3300010162	Termite Gut	KQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSIWL*
Ga0123353_103321691	3300010167	Termite Gut	QNMKLVTTRFKSGGLHEKHVVATWNLGNHLRICL*
Ga0123353_103433371	3300010167	Termite Gut	MKSVTTEFKSGGLHEKHVVATWNFGNHLSICLYTQ
Ga0123353_103534711	3300010167	Termite Gut	SGYFTCKQNMKSVTTEFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123353_103826513	3300010167	Termite Gut	FTCIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123353_104074072	3300010167	Termite Gut	QNMKLVTNKFKSGGLHEKHVVATWNLGNHLSICL*
Ga0123353_105974731	3300010167	Termite Gut	QNMKLVTTRFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123353_109459491	3300010167	Termite Gut	CKQNMKSVTTRFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123353_111305971	3300010167	Termite Gut	QNMKLVTTRFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123353_112785271	3300010167	Termite Gut	YFTCIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123353_117269611	3300010167	Termite Gut	TCIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICLYT*
Ga0123353_119753471	3300010167	Termite Gut	VKTAIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123353_120268071	3300010167	Termite Gut	CIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123353_120695661	3300010167	Termite Gut	SKVKTAIQNMKLVTNKFKSVGLHEKHVVATWNVGNHLSVCF*
Ga0123353_124982421	3300010167	Termite Gut	TCIQNMKLVTARFKWGGLHEKHVVATWNVGNRLSICL*
Ga0123353_127892801	3300010167	Termite Gut	IQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123353_127915062	3300010167	Termite Gut	VTNKLVITRFKSGVLHEKLVVATWNVGNRLSICL*
Ga0136643_100543071	3300010369	Termite Gut	KQNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0136643_101883652	3300010369	Termite Gut	FTCKQNMKLVTTRFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0136643_102305371	3300010369	Termite Gut	FTCIQNMKLVTNKFKSGGLHEKHVVATWNLVNRLSVCL*
Ga0136643_103264961	3300010369	Termite Gut	TCIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0136643_103491232	3300010369	Termite Gut	ACIQNVKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0136643_104304394	3300010369	Termite Gut	TCIQNMKLVTNKFKSGGIHEKHVVATWNVGNRLSVCL*
Ga0136643_104491511	3300010369	Termite Gut	QNMKLVTNKFKSGGLHEKHVVATGNVGNHLSICF*
Ga0136643_104880651	3300010369	Termite Gut	MCIQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSICL
Ga0136643_104995481	3300010369	Termite Gut	QNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0136643_105022171	3300010369	Termite Gut	IQNMKLVTNKFKSRGLHEKHVVATWNVGNHLSVCL*
Ga0136643_105095001	3300010369	Termite Gut	QNMKLVTTRFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0136643_105258391	3300010369	Termite Gut	CKQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSISL*
Ga0136643_105508491	3300010369	Termite Gut	AIQNMKLVANEFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0136643_105571841	3300010369	Termite Gut	CKQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0136643_106328232	3300010369	Termite Gut	IQNVKLVTTRFKSGGLHEKHVVATWNVGNHLSICL*
Ga0136643_107458191	3300010369	Termite Gut	LLVTKLVTNKFKSGVLHEKHVVATWNVGNHLSICL*
Ga0136643_107912161	3300010369	Termite Gut	CIQNMKLVTTRFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0123354_101138065	3300010882	Termite Gut	FTYIQNMKLVTNEFKSGGLHEKHVVATWNLGNHLSICL*
Ga0123354_101609563	3300010882	Termite Gut	FTCKQNMKLVTTEFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0123354_102964891	3300010882	Termite Gut	QNMKSVTTEFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123354_103401871	3300010882	Termite Gut	IQNVKLVTNKFKSGGLHEKHVVATWNVGNRLSVCL*
Ga0123354_103942881	3300010882	Termite Gut	YMYIQNMKLVTNKFKSGGLHEKHVVATWNVGNHLSICL*
Ga0123354_104001862	3300010882	Termite Gut	CKQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0123354_104385811	3300010882	Termite Gut	AIQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL*
Ga0209755_101787551	3300027864	Termite Gut	CIQNMKLVTNKFKSVGLHEKHVVATWNVGNRLSICL
Ga0209755_102748441	3300027864	Termite Gut	CKQNMKLVTTKFKSGGLHEKHVVATRNVGNRLSICL
Ga0209755_103405381	3300027864	Termite Gut	IQNMKSVTTEFKSGGLHEKHVVATWNVGNHLSICF
Ga0209755_103741292	3300027864	Termite Gut	FTCIQNMKSVTTEFKSGGLHEKHVVATWNLGNHLSISF
Ga0209755_104419211	3300027864	Termite Gut	GYFTCKLNMKLVTTKFKSGGLHEKHVVATWNVGNHLSICL
Ga0209755_104478221	3300027864	Termite Gut	TCKQNMKLVTTEFKSGGLHEKHVVATWNVGNRLSVCL
Ga0209755_104561861	3300027864	Termite Gut	FTCKQNMKLVTTKFKSGGLHEKHVVATWNLGNHLSICL
Ga0209755_105401431	3300027864	Termite Gut	GYFTCIQNMKSVTTEFKSGGLHEKHVVATWNLGNHLSICF
Ga0209755_105863721	3300027864	Termite Gut	TCKQNMKLVTNRFKSGGLHEKHVVATWNVGNRPSVCL
Ga0209755_106181161	3300027864	Termite Gut	GYFTCIQNMKSVTTEFKSGGLHEKHVVATGNVGNHLSVCL
Ga0209755_106605802	3300027864	Termite Gut	KQNMKLVTTKFKSGGLHEKHVVATWNLGNRLSNGYYILKRH
Ga0209755_107168961	3300027864	Termite Gut	MKLVTTKLVTTKFKSGGLHEKHVVATWNLGNHLNICL
Ga0209755_108649931	3300027864	Termite Gut	QNMKSVTTNEFKSGGVHEKHVVATWNVGNRLSICL
Ga0209755_109414321	3300027864	Termite Gut	CIQNMKSVTTKFKSGGLHEKHVVATWNVVNRLSVCL
Ga0209755_109426701	3300027864	Termite Gut	IQNMKLVTNKFKSGGLHEKHVVATWNVGNRLSICL
Ga0209755_109683871	3300027864	Termite Gut	YFTCKQNMKSVTTKFKSGGLHEKHVVATWNVGNHLSI
Ga0209755_109875822	3300027864	Termite Gut	DDARSNKQNMKLVTTEFKSGGLHEKHVVATWNVGNHLSICL
Ga0209755_110148091	3300027864	Termite Gut	MKLVTTEFKSGGLHEKHVVATWNVGNHLSICLQAQGNQ
Ga0209755_112229631	3300027864	Termite Gut	KQKMKLVATKFKSGGLHEKHVVATWNVGNRLSVCL
Ga0209755_112467701	3300027864	Termite Gut	TPKQNMKLVATKFKSGGLNEKHVVATWNVGNRLSICF
Ga0209737_117281971	3300027904	Termite Gut	NIKKKKVTRKFKSGGLHERHVVATWKLGNNLSIRL
Ga0209738_100424701	3300027966	Termite Gut	TNTKMVRTNMKMVNTKFKTGGLHEKHVVATWNVGNHLSICL
Ga0209629_105667301	3300027984	Termite Gut	MKKERKKKKVTRKFKSGGLHERHVVATWKLGNHLSIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048624

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences