NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F047102

Metagenome / Metatranscriptome Family F047102

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F047102
Family Type Metagenome / Metatranscriptome
Number of Sequences 150
Average Sequence Length 74 residues
Representative Sequence MTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Number of Associated Samples 133
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.08 %
% of genes near scaffold ends (potentially truncated) 37.33 %
% of genes from short scaffolds (< 2000 bps) 73.33 %
Associated GOLD sequencing projects 124
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (68.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(26.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.54%    β-sheet: 0.00%    Coil/Unstructured: 38.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.87.1.1: DBL homology domain (DH-domain)d1txda11txd0.85229
c.49.2.1: ATP synthase (F1-ATPase), gamma subunitd2jdig_2jdi0.82925
a.238.1.1: BAR domaind2d4ca12d4c0.82352
a.24.14.1: FAT domain of focal adhesion kinased1k04a_1k040.81348
a.238.1.2: Arfaptin, Rac-binding fragmentd1i4ta_1i4t0.81098

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 150 Family Scaffolds
PF13458Peripla_BP_6 40.67
PF00672HAMP 5.33
PF03330DPBB_1 2.67
PF02203TarH 2.00
PF00188CAP 2.00
PF14026DUF4242 2.00
PF08241Methyltransf_11 0.67
PF00027cNMP_binding 0.67
PF01557FAA_hydrolase 0.67
PF00497SBP_bac_3 0.67
PF00486Trans_reg_C 0.67
PF13432TPR_16 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 150 Family Scaffolds
COG0840Methyl-accepting chemotaxis protein (MCP)Signal transduction mechanisms [T] 4.00
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 2.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.00 %
UnclassifiedrootN/A32.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2209111006|2214856298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium8987Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0797830Not Available929Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1084818Not Available500Open in IMG/M
3300001989|JGI24739J22299_10000643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria12577Open in IMG/M
3300001990|JGI24737J22298_10007626All Organisms → cellular organisms → Bacteria → Proteobacteria3645Open in IMG/M
3300002070|JGI24750J21931_1003864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1803Open in IMG/M
3300002075|JGI24738J21930_10007561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2502Open in IMG/M
3300003324|soilH2_10215342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2727Open in IMG/M
3300004114|Ga0062593_102740348All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae562Open in IMG/M
3300004156|Ga0062589_101992274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales589Open in IMG/M
3300004157|Ga0062590_100111994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1763Open in IMG/M
3300004157|Ga0062590_100898778All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300004157|Ga0062590_102536255Not Available544Open in IMG/M
3300004463|Ga0063356_104929859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria574Open in IMG/M
3300004479|Ga0062595_101671454Not Available598Open in IMG/M
3300005093|Ga0062594_100238580Not Available1315Open in IMG/M
3300005158|Ga0066816_1018653Not Available571Open in IMG/M
3300005164|Ga0066815_10004846All Organisms → cellular organisms → Bacteria1438Open in IMG/M
3300005168|Ga0066809_10135031Not Available630Open in IMG/M
3300005276|Ga0065717_1006636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales786Open in IMG/M
3300005277|Ga0065716_1004002Not Available1086Open in IMG/M
3300005289|Ga0065704_10006120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2994Open in IMG/M
3300005290|Ga0065712_10072697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4650Open in IMG/M
3300005290|Ga0065712_10322627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria826Open in IMG/M
3300005294|Ga0065705_10011105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3384Open in IMG/M
3300005295|Ga0065707_10657025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium660Open in IMG/M
3300005329|Ga0070683_100056404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3648Open in IMG/M
3300005332|Ga0066388_105811833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria624Open in IMG/M
3300005334|Ga0068869_101654766Not Available571Open in IMG/M
3300005337|Ga0070682_100652715Not Available838Open in IMG/M
3300005339|Ga0070660_100075021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2647Open in IMG/M
3300005347|Ga0070668_100485432All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300005354|Ga0070675_100060210All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3134Open in IMG/M
3300005366|Ga0070659_100048057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3350Open in IMG/M
3300005434|Ga0070709_10092934All Organisms → cellular organisms → Bacteria1993Open in IMG/M
3300005439|Ga0070711_100038828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3203Open in IMG/M
3300005440|Ga0070705_100771544Not Available762Open in IMG/M
3300005457|Ga0070662_100724336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium842Open in IMG/M
3300005457|Ga0070662_101956422All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria506Open in IMG/M
3300005457|Ga0070662_101964189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales505Open in IMG/M
3300005458|Ga0070681_10100503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2838Open in IMG/M
3300005458|Ga0070681_11207627All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300005518|Ga0070699_100123500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2278Open in IMG/M
3300005526|Ga0073909_10436753Not Available623Open in IMG/M
3300005546|Ga0070696_101569793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae565Open in IMG/M
3300005564|Ga0070664_101617783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae614Open in IMG/M
3300005616|Ga0068852_101335988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales739Open in IMG/M
3300005713|Ga0066905_101740230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria574Open in IMG/M
3300005764|Ga0066903_100568837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1951Open in IMG/M
3300005764|Ga0066903_104468627Not Available746Open in IMG/M
3300005764|Ga0066903_105697890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium655Open in IMG/M
3300006041|Ga0075023_100397425Not Available596Open in IMG/M
3300006353|Ga0075370_10217471All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300006572|Ga0074051_11601599Not Available524Open in IMG/M
3300006574|Ga0074056_11357713Not Available509Open in IMG/M
3300006806|Ga0079220_11773781Not Available542Open in IMG/M
3300006854|Ga0075425_101575932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales741Open in IMG/M
3300006871|Ga0075434_100498247Not Available1239Open in IMG/M
3300006904|Ga0075424_100229227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1974Open in IMG/M
3300009094|Ga0111539_10072699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4055Open in IMG/M
3300009094|Ga0111539_10130112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2948Open in IMG/M
3300009174|Ga0105241_10611455Not Available986Open in IMG/M
3300009176|Ga0105242_13054354Not Available518Open in IMG/M
3300009545|Ga0105237_12323452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis546Open in IMG/M
3300009551|Ga0105238_10915017Not Available896Open in IMG/M
3300010047|Ga0126382_10014564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3907Open in IMG/M
3300010359|Ga0126376_10670252All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300010359|Ga0126376_10809652All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300010361|Ga0126378_11311866Not Available818Open in IMG/M
3300010362|Ga0126377_10002153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria13431Open in IMG/M
3300010371|Ga0134125_10095737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis3304Open in IMG/M
3300010371|Ga0134125_10632075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis1182Open in IMG/M
3300010371|Ga0134125_10692956Not Available1124Open in IMG/M
3300010398|Ga0126383_12011538Not Available665Open in IMG/M
3300010400|Ga0134122_10950535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria837Open in IMG/M
3300012478|Ga0157328_1032214Not Available502Open in IMG/M
3300012489|Ga0157349_1000735All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300012495|Ga0157323_1006729Not Available810Open in IMG/M
3300012514|Ga0157330_1007681Not Available983Open in IMG/M
3300012515|Ga0157338_1017196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria807Open in IMG/M
3300012900|Ga0157292_10292014Not Available582Open in IMG/M
3300012902|Ga0157291_10132759Not Available720Open in IMG/M
3300012905|Ga0157296_10000605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4521Open in IMG/M
3300012907|Ga0157283_10000536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5312Open in IMG/M
3300012912|Ga0157306_10253859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria622Open in IMG/M
3300012916|Ga0157310_10001619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4590Open in IMG/M
3300012948|Ga0126375_10048065All Organisms → cellular organisms → Bacteria2253Open in IMG/M
3300012989|Ga0164305_10234689All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300013306|Ga0163162_10044327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4455Open in IMG/M
3300013308|Ga0157375_11784594Not Available729Open in IMG/M
3300014745|Ga0157377_11454593Not Available543Open in IMG/M
3300015371|Ga0132258_10098233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6887Open in IMG/M
3300017939|Ga0187775_10007922All Organisms → cellular organisms → Bacteria2636Open in IMG/M
3300018032|Ga0187788_10128843All Organisms → cellular organisms → Bacteria → Proteobacteria938Open in IMG/M
3300019356|Ga0173481_10001075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6409Open in IMG/M
3300019356|Ga0173481_10002129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4967Open in IMG/M
3300019361|Ga0173482_10000263All Organisms → cellular organisms → Bacteria → Proteobacteria8933Open in IMG/M
3300022889|Ga0247785_1012938All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300022892|Ga0247753_1027694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria662Open in IMG/M
3300023062|Ga0247791_1057030All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300023067|Ga0247743_1000672All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3451Open in IMG/M
3300023073|Ga0247744_1011386All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300024055|Ga0247794_10097071All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300025271|Ga0207666_1000334All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6456Open in IMG/M
3300025711|Ga0207696_1068522Not Available989Open in IMG/M
3300025900|Ga0207710_10191633All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300025910|Ga0207684_10764345All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300025912|Ga0207707_10130469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2198Open in IMG/M
3300025912|Ga0207707_11069744Not Available659Open in IMG/M
3300025912|Ga0207707_11105330Not Available646Open in IMG/M
3300025917|Ga0207660_10174021All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300025921|Ga0207652_11153986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria676Open in IMG/M
3300025932|Ga0207690_11344495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria597Open in IMG/M
3300025933|Ga0207706_10039114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4205Open in IMG/M
3300025945|Ga0207679_11324438All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300025960|Ga0207651_10785883All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300026078|Ga0207702_10362708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1389Open in IMG/M
3300026095|Ga0207676_10308432Not Available1448Open in IMG/M
3300026746|Ga0207454_101998All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300026793|Ga0207441_101148All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300026818|Ga0207634_104657Not Available551Open in IMG/M
3300026873|Ga0207620_1014741All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300026900|Ga0207444_1004964All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300026952|Ga0207434_1021777Not Available538Open in IMG/M
3300027483|Ga0207637_1001539All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300027617|Ga0210002_1003125All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2432Open in IMG/M
3300027717|Ga0209998_10026880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1258Open in IMG/M
3300027765|Ga0209073_10059919All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300027876|Ga0209974_10300425Not Available614Open in IMG/M
3300027907|Ga0207428_10167387All Organisms → cellular organisms → Bacteria1666Open in IMG/M
3300028381|Ga0268264_10241201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1674Open in IMG/M
3300028791|Ga0307290_10189555Not Available754Open in IMG/M
(restricted) 3300031150|Ga0255311_1046088Not Available917Open in IMG/M
(restricted) 3300031248|Ga0255312_1203796Not Available500Open in IMG/M
3300031720|Ga0307469_11791818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria593Open in IMG/M
3300031740|Ga0307468_100175472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1415Open in IMG/M
3300031820|Ga0307473_10912077Not Available635Open in IMG/M
3300031847|Ga0310907_10006179All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3470Open in IMG/M
3300032013|Ga0310906_11363161Not Available519Open in IMG/M
3300032174|Ga0307470_10710503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria767Open in IMG/M
3300032179|Ga0310889_10130505All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300032179|Ga0310889_10227179Not Available874Open in IMG/M
3300032180|Ga0307471_101990449Not Available728Open in IMG/M
3300032421|Ga0310812_10002964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5437Open in IMG/M
3300033412|Ga0310810_10824142All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300033433|Ga0326726_10116678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2406Open in IMG/M
3300033433|Ga0326726_11886047Not Available582Open in IMG/M
3300033513|Ga0316628_100680677All Organisms → cellular organisms → Bacteria → Proteobacteria1348Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil9.33%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere6.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.33%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.33%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.33%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.33%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.33%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.33%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.33%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.67%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.67%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.67%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.67%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.67%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.67%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.67%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111006Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300001989Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5Host-AssociatedOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005277Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012478Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610Host-AssociatedOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012900Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022889Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4EnvironmentalOpen in IMG/M
3300022892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5EnvironmentalOpen in IMG/M
3300023062Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4EnvironmentalOpen in IMG/M
3300023067Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5EnvironmentalOpen in IMG/M
3300023073Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026746Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026793Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026818Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026873Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026900Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026952Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027252Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027483Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
22139024072209111006Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
ICChiseqgaiiDRAFT_079783033300000033SoilVTLSIAIPESRRCRERALECRTVAGRLRVQNARDQMLRVAADYERMARDAEQREIAQGLSHLRALIVRQSLAHEAA*
AP72_2010_repI_A001DRAFT_108481823300000893Forest SoilMPFSLATPESRRCRTRALECRLMAGHVRVHIARDQLLKAAADYERMAQDAEQREIEQGLSHLRALAMGRR*
JGI24739J22299_1000064333300001989Corn RhizosphereVTXSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
JGI24737J22298_1000762643300001990Corn RhizosphereMPESRRCRERALECRTVAGRLRVQNTRDQMXRVAADYERMARDAEXQEIAQGLSYLRALVVRQRHGGQAA*
JGI24750J21931_100386433300002070Corn, Switchgrass And Miscanthus RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEXQEIAQGLSYLRALVVRQRHGGQAA*
JGI24738J21930_1000756113300002075Corn RhizosphereAVTFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
soilH2_1021534243300003324Sugarcane Root And Bulk SoilMMTPAIAIPESRRCRLRALECRAIAGRLRMPNARVQMLKVAADYDRMAGDAKFREIALGLRHLRRLAARCQVGRQVARPASRRQKLSSD*
Ga0062593_10274034813300004114SoilIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0062589_10199227413300004156SoilVTLSIAVPESRRCRERALECRTVADRLRVQNSRNQMLKVAADYERMARDAEQREIAQGLSHLRALIVRQSLAHEAA*
Ga0062590_10011199413300004157SoilVFPKYRKLNAAQMTLPIAIPESRRCRERALECRSLAGYLRVQNARDQMLKTAADYERMGRDAEQREIAQGLSHLRALVVRQRHGRQAA*
Ga0062590_10089877823300004157SoilVALLIAIPESRRCRERALECRIVADRLRLQNARDQMLKVAADYDRMARDAKQREIAQGLSHLSALVVRQRRGRQAA*
Ga0062590_10253625523300004157SoilVTLSIAIPESRRCRQRALECRTVAGRLRVQNARDQMLKVAADYERMARDAEQREIAQGLSHLKALIVMQRRGRRAA*
Ga0063356_10492985913300004463Arabidopsis Thaliana RhizosphereVTLSIAIPESRRCLERALECRTVAGRLRVQNARDQMLRVAADYERMARDAEQREIAQGLSHLRALVVRQRHGSQAA*
Ga0062595_10167145413300004479SoilMTLPIIMPESRRCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA*
Ga0062594_10023858043300005093SoilVTLSIAIPESRRCRERALECRTVADRLSLQNARDQMLKVAADYERMARDAKQREIAQGLSHLSALVVRQRHGQQAA*
Ga0066816_101865313300005158SoilMPESRRCRERALECRTVAGRLRVQNTRDQMLRAAADYERMARDAEQREIAQGLLYLRALVFRQR
Ga0066815_1000484613300005164SoilVTLPIAIPESRRCRERALECRTVADRLRLQNARDQMLKVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGG
Ga0066809_1013503123300005168SoilMTGSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRAAADYERMARDAEQREIAQGLLYLRALVFRQRHGGQAA*
Ga0065717_100663623300005276Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA*
Ga0065716_100400213300005277Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVR
Ga0065704_1000612033300005289Switchgrass RhizosphereRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0065712_1007269733300005290Miscanthus RhizosphereMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0065712_1032262713300005290Miscanthus RhizosphereVTFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0065705_1001110543300005294Switchgrass RhizosphereMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA*
Ga0065707_1065702513300005295Switchgrass RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0070683_10005640473300005329Corn RhizosphereVTLSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0066388_10581183323300005332Tropical Forest SoilMTVSIAIPESRRCRERAVECRSVAGRLRLQNARDQMLRAAADYERMARDAEQREIAQGLSLLRALLARQRHRRQAA*
Ga0068869_10165476613300005334Miscanthus RhizosphereGFLRCRRSNIVTLSIAIPESRRCRQRALECRTVAGRLRVQNARDQMLKVAADYERMARDAEQREIAQGLSHLKALIVMQRRGRRAA*
Ga0070682_10065271523300005337Corn RhizosphereMTLPIVMPESRRCRQRALECRNLADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLKALIVMQRRGRRAA*
Ga0070660_10007502133300005339Corn RhizosphereFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0070668_10048543233300005347Switchgrass RhizosphereVTFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQR
Ga0070675_10006021033300005354Miscanthus RhizosphereMTVPIAIPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0070659_10004805713300005366Corn RhizosphereVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0070709_1009293433300005434Corn, Switchgrass And Miscanthus RhizosphereMRSAIAIPESRRCRDRARECRTTAERLQMQDARDQMLRVAGYYERMARDAEQREIAQGLSRLRALVARERQGVQAA*
Ga0070711_10003882873300005439Corn, Switchgrass And Miscanthus RhizosphereMSLTVALPESRRCLTRARECRTMAERFRLPIARDQMLKAASDFERMARDAERREIALGVTHLKGLATRGYHSHRSSPR*
Ga0070705_10077154413300005440Corn, Switchgrass And Miscanthus RhizosphereVALLIAIPESRRCRERALECRIVADRLRLQNARDQMLKVAADYDRMARDAKQREIAQGLSHL
Ga0070662_10072433623300005457Corn RhizosphereSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0070662_10195642213300005457Corn RhizosphereVTLSIAIPESRRCRQRALECRTVAGRLRVQNARDQMLKVAADYERMARDAEQREIAQGLSHLKALIVMQRR
Ga0070662_10196418913300005457Corn RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQR
Ga0070681_1010050353300005458Corn RhizosphereMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0070681_1120762723300005458Corn RhizosphereMEVRRRMRSAIAIPESRRCRDRARECRTTAERLQMQDARDQMLRVAGYYERMARDAEQREIAQGLSRLRALVARERQGVQAA*
Ga0070699_10012350013300005518Corn, Switchgrass And Miscanthus RhizosphereNAVTLSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0073909_1043675313300005526Surface SoilVTLPIAIPESRRCRERALECRTVADRLRLQNARDQMLKVAADYERMARDAEQREIAQGLLHLRALVIRQRPGEQAA*
Ga0070696_10156979323300005546Corn, Switchgrass And Miscanthus RhizosphereQRALECRTVAGRLRVQNARDQMLKVAADYERMARDAEQREIAQGLSHLKALIVMQRRGRRAA*
Ga0070664_10161778313300005564Corn RhizosphereESRRCRERALECRNLADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA*
Ga0068852_10133598813300005616Corn RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQA
Ga0066905_10174023013300005713Tropical Forest SoilSDAMTVSIAIPESRRCRERAIECRAAAGRLRVQNARDQMLKAAADWERMARDAEQREIAQGLSLLGALVIRQRHRQQAA*
Ga0066903_10056883733300005764Tropical Forest SoilMTVSIAIPESRRCRERAVECRSVAGRLRLQNARDQMLRAAADYERMARDAEQREIAQGLSLLRALVVRQRHRQQAA*
Ga0066903_10446862733300005764Tropical Forest SoilMLMAIAIPESRKCRTRAHECRTAAERLRVQIARDQMLKAAADYERMARDAEQFEIAQGLSHLRAIAGGRR*
Ga0066903_10569789023300005764Tropical Forest SoilTVSIAIPESRRCKERARQCRSVAGHLRVQNAREQMLKAASDYERMARDAEQREIAQGVSLLRALVVRQRHGQRAA*
Ga0075023_10039742513300006041WatershedsESHRCRTRARECRSIAEQFRVHIARDQMLKAAAEYERMARDAEQREIAQGLSYLRALTAGRHLPR*
Ga0075370_1021747123300006353Populus EndosphereCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA*
Ga0074051_1160159923300006572SoilVTLPIAIPESRRCRERALECRTVADRLRLQNARDQMLKVAADYERMARDAKQREIAQGLSHLSALVVRQRHGRQA
Ga0074056_1135771323300006574SoilVTLPIAIPESRRCRERALECRTVADRLRLQNARDQMLKVAADYERMARDAKQREIAQGLSHLSALVVRQRHGRQAA*
Ga0079220_1177378123300006806Agricultural SoilMSLTIALPESRRCRTRARECRTIAERFRLPIARDQMLKAASDFERMARDAEQREIVQGMSLLKALATRGYLSHRRGPG
Ga0075425_10157593223300006854Populus RhizosphereMTLPIVMPESRRCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA*
Ga0075434_10049824733300006871Populus RhizosphereMNAMTVSLAIPESRRCRERALQCRTVAGRLRVQNARDQMLRVAANYERMARDAEQREIAQGLSL
Ga0075424_10022922733300006904Populus RhizosphereMNAMTVSLAIPESRRCRERALQCRTVAGRLRVQNARDQMLRVAANYERMARDAEQREIAQGLSLLGALVVRQRHRQQAA*
Ga0111539_1007269933300009094Populus RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0111539_1013011213300009094Populus RhizosphereMTLSIAIPESRRCRERALECRAVARYLRVQNTRAQMLKVAADYERMARDAEQREIAQGMSYLRALVARQRYGRQAA*
Ga0105241_1061145533300009174Corn RhizosphereMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIDQGLSYLRALVVS
Ga0105242_1305435413300009176Miscanthus RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEHQEIAQGLSYLRALVVRQRHGGQAA*
Ga0105237_1232345223300009545Corn RhizospherePESRRCRDRARECRTTAERLQMQDARDLMLRVAGYYERMARDAEQREIAQGLSRLRALVARERQGVQAA*
Ga0105238_1091501713300009551Corn RhizosphereMTVSIAMPENRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0126382_1001456433300010047Tropical Forest SoilMVAVTVSIAMPESLRCKERARQCRSVAGHLRVQNAREQMLKAAADYERMARDAERREIAQGVSLLGALVVRQRHGQRAA*
Ga0126376_1067025223300010359Tropical Forest SoilMVAVTVSIAMPESLRCKERARQCRSVAGHLRVQNAREQMLKAAAEYERMARDAEQREIAQGVSLLTALIVRQRHGQRAA*
Ga0126376_1080965213300010359Tropical Forest SoilKAVTLSIAIPERQRCRERALECRTVADRLSLQNARDQMLKVAADYERMARDAKQREIAQGLSHLSALVVRQRHGRQAA*
Ga0126378_1131186623300010361Tropical Forest SoilMLLAIAIPESRKCRTRAHQCRTAAERLRVQIARDQMLKAAADYDRMARDAEQREIAQGLSHLRAIAGGRR*
Ga0126377_1000215343300010362Tropical Forest SoilMDTVTVSIAIPESRRCRQRARQCRSVAGHLRVQNAREQMLKAAAEYERMARDAEQREIAQGVSLLTALIVRQRPGQRAA*
Ga0134125_1009573723300010371Terrestrial SoilMRSAIAIPESRRCRDRAQECRTTAERLQMQDARDQMLRVAGYYERMARDAEQREIAQGLSRLQALVARERQGVQAA*
Ga0134125_1063207513300010371Terrestrial SoilMSLTVALPESRRCLTRARECRTMAERFRLPIARDQMLKAASDFERMARDAERREIALGVTHLKELATRGYHSHRSSPR*
Ga0134125_1069295633300010371Terrestrial SoilMQLTMTLPIAIPESRRCRERALECRSLAGYLRVQNARDQMLKTAADYERMGRDAEQREIAQGLSHLRALVVRQRHGRQAA*
Ga0126383_1201153813300010398Tropical Forest SoilMLLAIAIPESRKCRTRAHECRTAAERLRVQIARDQMLKAAADYERMARDAEQFEIAQGLSHLRAIAGGHR
Ga0134122_1095053523300010400Terrestrial SoilMTLPIAIPESRRCRERALECRSLAGYLRVQNARDQMLKTAADYERMGRDAEQREIAQGLSHLRALVVRQRHGRQAA*
Ga0157328_103221423300012478Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRRGGQAA*
Ga0157349_100073523300012489Unplanted SoilMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRHSGQAA*
Ga0157323_100672923300012495Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLQVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHSGQAA*
Ga0157330_100768123300012514SoilMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGAQAA*
Ga0157338_101719623300012515Arabidopsis RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHSGQAA*
Ga0157292_1029201423300012900SoilMQLTMTLPIAIPESRRCRERALECRSLAGYLRVQNARDQMLKAAADYERMARDAEQWEIAQGLSHLRALVVRQRHGRQAA*
Ga0157291_1013275913300012902SoilSRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0157296_1000060523300012905SoilMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRHAA*
Ga0157283_1000053633300012907SoilMPFSIAIPESRRCRERALECRTVADRLRLQNARHEMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0157306_1025385923300012912SoilVTLSIAIPESRKCRERALECRTVADRLRLQNARHEMLKVAADYERMARDAKQREIAQGLSYLSALVLRQHQAA*
Ga0157297_1000290513300012914SoilAAGFSGVVGEMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA*
Ga0157310_1000161913300012916SoilRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA*
Ga0126375_1004806533300012948Tropical Forest SoilMVAVTVSVAIPESRRCKERARQCRSVAGHLRVQNAREQMLKAAADYERMARDAERREIAQGVSLLGALVVRQRHGQRAA*
Ga0164305_1023468923300012989SoilMPESRRCRERALECRTGAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0163162_1004432723300013306Switchgrass RhizosphereMPESRRCRERALECRTVALRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRHGGQAA*
Ga0157375_1178459413300013308Miscanthus RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRH
Ga0157377_1145459313300014745Miscanthus RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQELAKGLSYLRALVVRQRHGGQAA*
Ga0132258_1009823393300015371Arabidopsis RhizosphereMTLPIVMPESRRCRERAIECRNLADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA*
Ga0187775_1000792233300017939Tropical PeatlandMSLQLALPESRKCRKRARECRSMAELVRVQIARDQLLKAAADYERMARDAEQREIAQGLSHLRQLMGRSSAR
Ga0187788_1012884313300018032Tropical PeatlandAVPESRRCRTRARECRSMAEQFRVHIARDQLLKAAADYERMARDAEQREIALGLHALATGRLPR
Ga0173481_1000107553300019356SoilMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0173481_1000212933300019356SoilMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0173482_1000026313300019361SoilVTFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0247785_101293813300022889SoilVGEMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0247753_102769423300022892SoilVTLSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0247791_105703023300023062SoilRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0247743_100067233300023067SoilMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0247744_101138623300023073SoilEMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0247794_1009707123300024055SoilGEMPFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0207666_100033453300025271Corn, Switchgrass And Miscanthus RhizosphereMTVPIAIPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0207696_106852213300025711Switchgrass RhizosphereVTLSIAIPESRRCREGALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRHAA
Ga0207710_1019163323300025900Switchgrass RhizosphereMTLPIIMPESRRCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA
Ga0207684_1076434523300025910Corn, Switchgrass And Miscanthus RhizosphereVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLSVLVVRQRQAA
Ga0207707_1013046933300025912Corn RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0207707_1106974423300025912Corn RhizosphereMEVRRRMRSAIAIPESRRCRDRARECRTTAERLQMQDARDQMLRVAGYYERMARDAEQREIAQGLSRLRALVARERQGVQAA
Ga0207707_1110533023300025912Corn RhizosphereVFPKYRKLNAAQMTLPIAIPESRRCRERALECRSLAGYLRVQNARDQMLKTAADYERMGRDAEQREIAQGLSHLRALVVRQRHGRQAA
Ga0207660_1017402123300025917Corn RhizosphereVALLIAIPESRRCRERALECRIVADRLRLQNARDQMLKVAADYDRMARDAKQREIAQGLSHLSALVVRQRRGRQAA
Ga0207652_1115398613300025921Corn RhizosphereIAIPESRRCRERALECRIVADRLRLQNARDQMLKVAADYDRMARDAKQREIAQGLSHLSALVVRQRRGRQAA
Ga0207690_1134449513300025932Corn RhizosphereTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0207706_1003911463300025933Corn RhizosphereMTVPIAIPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0207679_1132443813300025945Corn RhizospherePIVMPESRRCRERALECRNLADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA
Ga0207651_1078588323300025960Switchgrass RhizosphereRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0207702_1036270823300026078Corn RhizosphereTFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0207676_1030843213300026095Switchgrass RhizosphereMTLPIVMPESRRCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA
Ga0207454_10199823300026746SoilESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0207441_10114813300026793SoilFSIAIPESRRCRERALECRTVADRLRLQNARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRQAA
Ga0207634_10465713300026818SoilMPFSIAIPESRRCRERALECRTVADRLRLQDARAQMLKVAADYERMARDAKQREIAQGLSYLSVLVVRQRH
Ga0207620_101474123300026873SoilRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0207444_100496423300026900SoilRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0207434_102177713300026952SoilVTLSIAIPESRKCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0209973_100919423300027252Arabidopsis Thaliana RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSNSRNAPLLNHS
Ga0207637_100153923300027483SoilMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLSVLVVRQRQAA
Ga0210002_100312523300027617Arabidopsis Thaliana RhizosphereMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLSVLVVRQRQAA
Ga0209998_1002688033300027717Arabidopsis Thaliana RhizosphereMPESRRCRERALECRTVADRLRLQNARDQMLRVATVYERMARDAEQREIAQGLSHLRALVVRQRARQQAA
Ga0209073_1005991913300027765Agricultural SoilMSLQIALPESRRCRKRARECRSMAELVRVHIARDQLLKAAADYERMARDAEQREIAQGLSHLRALAMSRSYARRSYAR
Ga0209974_1030042513300027876Arabidopsis Thaliana RhizosphereRNLGRRSGFLRCRRSNAVTLVIAIPESRRCQQRAHECRTVADRLRLQNARDQMLKVAADYERMARDARQREIAQGLSHLSAVVARQRHGRQAA
Ga0207428_1016738723300027907Populus RhizosphereMTLSIAIPESRRCRERALECRAVARYLRVQNTRAQMLKVAADYERMARDAEQREIAQGMSYLRALVARQRYGRQAA
Ga0268264_1024120143300028381Switchgrass RhizosphereMTVSIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVV
Ga0307290_1018955513300028791SoilMSLLIAVPESRWCRTRARECRTMAESLRVQMAREQMLKAASDYDRMARDAEQREIAQGLSHLRALATGR
(restricted) Ga0255311_104608813300031150Sandy SoilMTVSIAMPESRRCRERALECRTVADRLRVQNTRDQMLRVAADYERMARDAEQREIAQGLLYLRALVFRQHHGGQAASRPE
(restricted) Ga0255312_120379623300031248Sandy SoilMPESRRCRERALECRTVADRLRVQNTRDQMLRVAADYERMARDAEQREIAQGLLYLRALVFRQHHGGQAASRPE
Ga0307469_1179181813300031720Hardwood Forest SoilSIAIPESRRCRERARQCRSVAGLLRVQDAREQMLKAAADYERMARDAEHREIAQGLSLLVALVVRQRHGQQAA
Ga0307468_10017547243300031740Hardwood Forest SoilMDAVTVSIAIPESRRCRERARQCRSVAGLLRVQNAREQMLKAAADYERMARDAEQREIAQGVSLLGALVVRQRHGQRAA
Ga0307473_1091207723300031820Hardwood Forest SoilMSLSLAIPESRRYRTRARECRSMAELFRVHIARDQLLKAATDYERMAQETKQREIAQGLSHLLAMSRR
Ga0310907_1000617923300031847SoilMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEHQEIAQGLSYLRALVVRQRHGGQAA
Ga0310906_1136316123300032013SoilVTLPIAIPESRRCRERALECRTVADRLRLQNARDQMLKVAADYERMARDAEQREIAQGLLHLRALVIRQRPGEQAA
Ga0307470_1071050323300032174Hardwood Forest SoilMDAVTVSIAIPESRRCRERARQCRSVAGLLRVQDAREQMLKAAADYERMARDAEHREIAQGLSLLVALVVRQRHGQQAA
Ga0310889_1013050523300032179SoilMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYQRMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0310889_1022717933300032179SoilMTVPIAIPESRRCRERALECRTVAGPLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0307471_10199044923300032180Hardwood Forest SoilMTPEAVMSLSLAIPESRRYRTRARECRSMAELFRVHIARDQLLKAATDYERMAQETKQREIAQGLSHLLAMSRR
Ga0310812_1000296463300032421SoilMPESRRCRERALECRNVADRLRMQIARNQMLKVAADYERMARDAEQREIAQGLSHLRALAARQSLAHEAA
Ga0310810_1082414223300033412SoilIAMPESRRCRERALECRTVAGRLRVQNTRDQMLRVAADYERMARDAEQQEIAQGLSYLRALVVRQRHGGQAA
Ga0326726_1011667823300033433Peat SoilMPLSIAVPESRRCRTRARECRSMAEQFRVHIARDQMLKAAADYERMARDAEQREIAQGLSYLRALTAGRHLPR
Ga0326726_1188604713300033433Peat SoilMPLSIAVPESRRCRTRARQCRTMAERFRVHIARDQMLKAAADYERMANDAEQREIAQGLSYLRALAEARHLPR
Ga0316628_10068067723300033513SoilMTPLSLAVPESRRCRARAREYRSLAALFRGQNTRDKMLRVAADYERMAQDAKEREIAQGLLHLSALARNRHPAR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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