Metagenome Family F041123

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041123
Family Type	Metagenome
Number of Sequences	160
Average Sequence Length	60 residues
Representative Sequence	MNAFLDARSNLCYTQINVEQDHTFDGDGRRAFYGSGGSRRAIVHPLQRAKSKSLSGKLLR
Number of Associated Samples	107
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.09 %
% of genes near scaffold ends (potentially truncated)	38.12 %
% of genes from short scaffolds (< 2000 bps)	76.25 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.375 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (48.125 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.77% β-sheet: 0.00% Coil/Unstructured: 85.23%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00274	Glycolytic	44.38
PF02321	OEP	16.25
PF16347	DUF4976	3.75
PF03596	Cad	1.88
PF03773	ArsP_1	1.88
PF00702	Hydrolase	1.88
PF00122	E1-E2_ATPase	1.25
PF13437	HlyD_3	0.62
PF01728	FtsJ	0.62
PF08282	Hydrolase_3	0.62
PF01039	Carboxyl_trans	0.62
PF00403	HMA	0.62
PF16576	HlyD_D23	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	44.38
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	32.50
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	2.50
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	1.88
COG4300	Cadmium resistance protein CadD, predicted permease	Inorganic ion transport and metabolism [P]	1.88
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	1.25
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	1.25
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.62
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.62
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.62
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.62
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.62
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.62
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.62
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.62
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.62
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.38 %
Unclassified	root	N/A	20.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.38 %
Unclassified	root	N/A	20.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.38 %
Unclassified	root	N/A	20.62 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	60.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	60.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	55.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	55.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	55.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	55.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.62 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	55.62 %
Unclassified	root	N/A	20.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.62 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16728204	All Organisms → cellular organisms → Bacteria → Proteobacteria	3330	Open in IMG/M
2170459009\|GA8DASG01EQ9JZ	Not Available	514	Open in IMG/M
3300000955\|JGI1027J12803_103789907	Not Available	1281	Open in IMG/M
3300002902\|JGI24803J43973_1004529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300005166\|Ga0066674_10059223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1741	Open in IMG/M
3300005166\|Ga0066674_10083116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1475	Open in IMG/M
3300005171\|Ga0066677_10254506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M
3300005171\|Ga0066677_10277982	Not Available	955	Open in IMG/M
3300005172\|Ga0066683_10046664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2546	Open in IMG/M
3300005175\|Ga0066673_10051162	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300005178\|Ga0066688_10773721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005179\|Ga0066684_10257083	Not Available	1148	Open in IMG/M
3300005180\|Ga0066685_10064306	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300005180\|Ga0066685_10770223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300005181\|Ga0066678_10242586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1163	Open in IMG/M
3300005181\|Ga0066678_10900699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005186\|Ga0066676_10024766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3189	Open in IMG/M
3300005186\|Ga0066676_10383960	Not Available	945	Open in IMG/M
3300005187\|Ga0066675_10062869	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300005187\|Ga0066675_10741684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300005446\|Ga0066686_10153466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1523	Open in IMG/M
3300005446\|Ga0066686_10236948	Not Available	1229	Open in IMG/M
3300005447\|Ga0066689_10102611	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005450\|Ga0066682_10467445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300005451\|Ga0066681_10040086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2517	Open in IMG/M
3300005454\|Ga0066687_10636464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300005540\|Ga0066697_10629419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300005540\|Ga0066697_10745920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005553\|Ga0066695_10026109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3333	Open in IMG/M
3300005555\|Ga0066692_10367262	Not Available	912	Open in IMG/M
3300005561\|Ga0066699_10029446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3156	Open in IMG/M
3300005574\|Ga0066694_10133717	Not Available	1172	Open in IMG/M
3300005575\|Ga0066702_10571402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300005586\|Ga0066691_10014432	All Organisms → cellular organisms → Bacteria	3785	Open in IMG/M
3300005598\|Ga0066706_10178093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1620	Open in IMG/M
3300006031\|Ga0066651_10254833	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006032\|Ga0066696_10054470	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300006791\|Ga0066653_10152244	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300006796\|Ga0066665_10014581	All Organisms → cellular organisms → Bacteria	4717	Open in IMG/M
3300006797\|Ga0066659_10441824	Not Available	1032	Open in IMG/M
3300006797\|Ga0066659_10510132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300006800\|Ga0066660_10493537	Not Available	1028	Open in IMG/M
3300009012\|Ga0066710_100607721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1659	Open in IMG/M
3300009012\|Ga0066710_102138814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300009012\|Ga0066710_102275805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300009012\|Ga0066710_103300502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300009038\|Ga0099829_10504735	Not Available	1004	Open in IMG/M
3300009090\|Ga0099827_10816486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300009137\|Ga0066709_102393966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300009137\|Ga0066709_104213614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300009137\|Ga0066709_104617229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300010301\|Ga0134070_10044090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1497	Open in IMG/M
3300010303\|Ga0134082_10048302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1629	Open in IMG/M
3300010321\|Ga0134067_10338046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300010322\|Ga0134084_10024883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1639	Open in IMG/M
3300010325\|Ga0134064_10087265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1009	Open in IMG/M
3300010325\|Ga0134064_10149630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300010329\|Ga0134111_10079052	Not Available	1237	Open in IMG/M
3300010329\|Ga0134111_10089060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1172	Open in IMG/M
3300010333\|Ga0134080_10132352	Not Available	1047	Open in IMG/M
3300010333\|Ga0134080_10439664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300012198\|Ga0137364_10800438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300012198\|Ga0137364_10952386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300012199\|Ga0137383_10120819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1911	Open in IMG/M
3300012200\|Ga0137382_10256980	Not Available	1211	Open in IMG/M
3300012200\|Ga0137382_10443886	Not Available	918	Open in IMG/M
3300012200\|Ga0137382_11218156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300012201\|Ga0137365_10297761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1196	Open in IMG/M
3300012201\|Ga0137365_10696056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300012201\|Ga0137365_11131997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300012202\|Ga0137363_10014522	All Organisms → cellular organisms → Bacteria → Proteobacteria	5141	Open in IMG/M
3300012204\|Ga0137374_10128045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2318	Open in IMG/M
3300012205\|Ga0137362_10103064	Not Available	2405	Open in IMG/M
3300012205\|Ga0137362_10124793	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300012205\|Ga0137362_11347230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300012205\|Ga0137362_11430133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300012205\|Ga0137362_11585765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012206\|Ga0137380_10586898	Not Available	975	Open in IMG/M
3300012206\|Ga0137380_10799874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300012207\|Ga0137381_10057539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3225	Open in IMG/M
3300012207\|Ga0137381_11531177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300012207\|Ga0137381_11569630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012208\|Ga0137376_10023390	All Organisms → cellular organisms → Bacteria → Proteobacteria	4785	Open in IMG/M
3300012209\|Ga0137379_11214099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300012210\|Ga0137378_10048696	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300012210\|Ga0137378_10859611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300012210\|Ga0137378_11120840	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012210\|Ga0137378_11432956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300012211\|Ga0137377_10963870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300012285\|Ga0137370_10996250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300012349\|Ga0137387_10218799	Not Available	1369	Open in IMG/M
3300012349\|Ga0137387_11123329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300012350\|Ga0137372_10077238	Not Available	2845	Open in IMG/M
3300012350\|Ga0137372_10116408	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300012351\|Ga0137386_10336155	Not Available	1087	Open in IMG/M
3300012353\|Ga0137367_10477417	Not Available	879	Open in IMG/M
3300012353\|Ga0137367_10640422	Not Available	742	Open in IMG/M
3300012354\|Ga0137366_10384181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1024	Open in IMG/M
3300012354\|Ga0137366_10715104	Not Available	713	Open in IMG/M
3300012354\|Ga0137366_10892077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012356\|Ga0137371_10574739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300012356\|Ga0137371_10643984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300012356\|Ga0137371_11237003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300012357\|Ga0137384_10095901	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300012357\|Ga0137384_11011557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300012358\|Ga0137368_10002429	All Organisms → cellular organisms → Bacteria	20005	Open in IMG/M
3300012360\|Ga0137375_10170599	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300012360\|Ga0137375_10552387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300012360\|Ga0137375_11400436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012362\|Ga0137361_11605161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300012532\|Ga0137373_10177791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1772	Open in IMG/M
3300012532\|Ga0137373_11153731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300012923\|Ga0137359_10077774	All Organisms → cellular organisms → Bacteria	2909	Open in IMG/M
3300012930\|Ga0137407_10188756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1843	Open in IMG/M
3300012930\|Ga0137407_11059744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300012930\|Ga0137407_12155560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300014150\|Ga0134081_10125035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300014157\|Ga0134078_10200197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300014166\|Ga0134079_10733534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300015356\|Ga0134073_10175320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300015358\|Ga0134089_10372168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300015359\|Ga0134085_10071965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1407	Open in IMG/M
3300017654\|Ga0134069_1141710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300017657\|Ga0134074_1076394	Not Available	1141	Open in IMG/M
3300018071\|Ga0184618_10423941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300018071\|Ga0184618_10436356	Not Available	552	Open in IMG/M
3300019789\|Ga0137408_1263744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300019866\|Ga0193756_1060024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300019881\|Ga0193707_1000154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20127	Open in IMG/M
3300019881\|Ga0193707_1009597	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300019881\|Ga0193707_1062896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1164	Open in IMG/M
3300019881\|Ga0193707_1189422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300019886\|Ga0193727_1114441	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300019887\|Ga0193729_1019337	All Organisms → cellular organisms → Bacteria → Proteobacteria	2967	Open in IMG/M
3300019890\|Ga0193728_1046136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2130	Open in IMG/M
3300020001\|Ga0193731_1035237	Not Available	1320	Open in IMG/M
3300020006\|Ga0193735_1021079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2020	Open in IMG/M
3300020006\|Ga0193735_1091685	Not Available	857	Open in IMG/M
3300020006\|Ga0193735_1126306	Not Available	690	Open in IMG/M
3300020018\|Ga0193721_1000786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	8914	Open in IMG/M
3300021086\|Ga0179596_10132028	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300022534\|Ga0224452_1051198	Not Available	1227	Open in IMG/M
3300022756\|Ga0222622_10909144	Not Available	645	Open in IMG/M
3300026309\|Ga0209055_1063391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1558	Open in IMG/M
3300026316\|Ga0209155_1058300	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300026324\|Ga0209470_1031260	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300026324\|Ga0209470_1038633	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300026330\|Ga0209473_1189391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300026334\|Ga0209377_1167352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300026343\|Ga0209159_1004996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	8458	Open in IMG/M
3300026359\|Ga0257163_1034277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300026528\|Ga0209378_1050067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2034	Open in IMG/M
3300026530\|Ga0209807_1213212	Not Available	667	Open in IMG/M
3300026537\|Ga0209157_1041891	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300026538\|Ga0209056_10137715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1900	Open in IMG/M
3300026538\|Ga0209056_10144352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1837	Open in IMG/M
3300026552\|Ga0209577_10053526	All Organisms → cellular organisms → Bacteria	3396	Open in IMG/M
3300027903\|Ga0209488_10568343	Not Available	825	Open in IMG/M
3300033475\|Ga0310811_10874284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.50%
Sediment	Environmental → Aquatic → Sediment	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002902	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um Nextera	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03974260	2088090014	Soil	MNAFLDARSKLCYTEINVEQEHNFADDGCRAFHGSDGPRRAIVHPFERAKSKSLSVKLLR
F47_10514210	2170459009	Grass Soil	MAMLNAFLDAWPNACYTQGYAEQDHDFSGDGCRPGSGSDGLRRAIVHPRQHAK
JGI1027J12803_1037899073	3300000955	Soil	MLNAFLDARSNLCYTESNVEQDDNFDGNGRRAFHGSGGRCREIVHPLQRAKSKSLSVK
JGI24803J43973_10045292	3300002902	Soil	MIKATKGLNASLDARSNLCYTAINVEQDHNFDGDGCRAFHRSGGSRRAIMHPSRRGRSKSLSVKL
Ga0066674_100592232	3300005166	Soil	LDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGEPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066674_100831161	3300005166	Soil	CYTQVNVEQDHNFDGDGRRAFHGSGRSRRAIMHPLEHGKSKSLSVKLLR*
Ga0066677_102545062	3300005171	Soil	INVEQDHSFDGDGDRAFHGSSGSRCAIVHPLQRAKSKSLSVKLLR*
Ga0066677_102779821	3300005171	Soil	MNAFLDARSNLCYTQINVEQDHNLSGDGCGTFHCSGGPRRAIVHPHQRAKSKGLSTKLLR
Ga0066683_100466641	3300005172	Soil	MTKSRKALNGCLDARSNLCYTHINVEQDHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLP*
Ga0066673_100511621	3300005175	Soil	VLVIVIMVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066688_107737212	3300005178	Soil	MNALLDARSNLCYTQFNVEQDHTFDGDGHRAFYGSGGSRRAIVHPHQRAKSKGLSVKLLR
Ga0066684_102570833	3300005179	Soil	MTGLTAFLDARSNTCYKENNVGQDHNFDGDDRGALHGSDGQYRAIVH
Ga0066685_100643061	3300005180	Soil	MNAFLDARSNLCYTQINVEQDHNFDGDGCRAFYGSGGSRRAIVHPYQRGKSKGLSTKLLR
Ga0066685_107702231	3300005180	Soil	SGLRRLVLVIVIMVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066678_102425862	3300005181	Soil	RSNLCYTQVNVEQDHNFDGDGRRAFHGSGRSRRAIMHPLEHGKSKSLSVKLLR*
Ga0066678_109006992	3300005181	Soil	MNASLDARSNLCYTQINVEQDHHFDRNGHRAFHRSGSSQRAIVHPLQRA
Ga0066676_100247663	3300005186	Soil	MNAFLDARSNLCYTQVNAEQDHSFDGDGRRRFHGSGGSRHAIVHPL*
Ga0066676_103839601	3300005186	Soil	MNTFLDARSNLCYTQVNAEQDHNFDGDGRRAFHGSGGPCRAIMHPLQRTK*
Ga0066675_100628693	3300005187	Soil	NSCYTKINGEQDHNIDGDGCRAFYGSGWPSRAIVHPLQRAESKSLSVKLLR*
Ga0066675_107416843	3300005187	Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYGSGGSRRAIVHPHQRAKSKGLSTKLLR*
Ga0066686_101534661	3300005446	Soil	SNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066686_102369482	3300005446	Soil	MTKSRKALNGCLDARSNLCYTHINVEQDHHFAGDGRCAFHGSGGSYRAI
Ga0066689_101026112	3300005447	Soil	VLVIVIIVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066682_104674452	3300005450	Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYSSGGPRRAIMHPYQRAKSKGLSTKLLR*
Ga0066681_100400862	3300005451	Soil	MHSSANSMNAFLDARSNLCYRKFNVEQDHNFDGDGCRAFYGSGGPRRAIVHPHQRAKSKGLSNKVLR*
Ga0066687_106364641	3300005454	Soil	MCVSAKSMNAFLDARSNLCYTQVNVEQDHNLDGDGRCAFYGSGGSRRAIVHPHQRSKSKGLSAKLLR*
Ga0066697_106294192	3300005540	Soil	VLVIVIMVPDREQEQEHESREALNAFLDAWSNLCYTQINVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066697_107459201	3300005540	Soil	MNAFLDARSNLCYTQINVEQDHNFDGDGCRAFYGSGGSRRAIVHPYQ
Ga0066695_100261093	3300005553	Soil	MNAFLDARSNLCYTQINVEQDHNFDRNSGRALHGSGSSQRAIVHPLQRAGAKSL*
Ga0066692_103672622	3300005555	Soil	LCYTQINVEQDHNLSGDGCGTFHCSGGPRRAIVHPHQRAKSKGLSTKLLR
Ga0066699_100294462	3300005561	Soil	MSRSTSKSRKVLNAFLDARSNLCYTKINVEQDHSFDGHGRRAFHGSSGSRRAIVHPYQRAKSKGLSTKLLR*
Ga0066694_101337171	3300005574	Soil	MNASLDARSNLCYTQINVEQDHHFDRNGRRAFHRSGSSQRAIVH
Ga0066702_105714022	3300005575	Soil	VNAFLDARSNLCYTQVNVEQDHNFVGDGLRAFYGSGGSRLAIMHPLQCASSTRL*
Ga0066691_100144325	3300005586	Soil	MNTFLDAGSNLCYTQINVEQDHNFAGDGRCAFCGSGGFHRAIMHPHQPVGAKSLSRSVLR
Ga0066706_101780932	3300005598	Soil	MSKSRKALNAFLDARSNLCYTQGNVEQDHNFDGDGCRAFHGSGGSRRAIMHPLQRAKSRSLSVKLLR*
Ga0066651_102548332	3300006031	Soil	MAMLNAFLDVWSNACYTQGNAEQDHDFSGDGCRATRGSDGLRRAIVHPRQRAK*
Ga0066696_100544703	3300006032	Soil	VNAFLDARSNLCYTQVNVEQDHTFAGDGCRAGYSSGRFHSAIMHPHQPVGAKSL
Ga0066653_101522442	3300006791	Soil	MQSSANSMNAFLDARSNLCYRKFNVEQDHNLGGDSRRAFYGSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066665_100145813	3300006796	Soil	VLVIVIMVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGEPRRAIMHPHQRAKSKGLSTKLLR*
Ga0066659_104418241	3300006797	Soil	MNALLDARSNLCYTQFNVEQDHTFDGDGHRAFYGSGGSRRAIVHPHQRAKSKGLS
Ga0066659_105101322	3300006797	Soil	MNAFLDAGPNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRAIVHPHQRSKSKSLSAKLLR
Ga0066660_104935372	3300006800	Soil	MRKVLMCVSAKSMNAFLDARSNLCYTQINVEQDHNLSDDGCRAFYGSGGSRRAIVHPHQRAKS
Ga0066710_1006077212	3300009012	Grasslands Soil	QEHESREALNAFLDAWSNLCYTQVNVEQDHSFDGDGCRAFYGSGGSRRAIVHPHQRAKSKGLSTQLLR
Ga0066710_1021388142	3300009012	Grasslands Soil	SNLCYTQINVEQDHNFDGDGYRAFYGSGRSRRAIVHPFQRAKSKGLSTKLLR
Ga0066710_1022758051	3300009012	Grasslands Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYGSGGSRRAIVHPHQRAKSKGLSTKLL
Ga0066710_1033005022	3300009012	Grasslands Soil	MNAFLDARSKLCYTEINVEQDDNFDGNGDRAFHGSGRSCREIMHLHQRAKSKSLSAKFLR
Ga0099829_105047352	3300009038	Vadose Zone Soil	MNALLDARSNLCYTQINVEQDHNLDGDGRRAFYGSGGSRRAIVHP
Ga0099827_108164861	3300009090	Vadose Zone Soil	MNTFLDARSNLCYTQVNVEQDHNFDGDGRGAFHGSGGSRRAIVHPHERAKSKSLSVKLLR
Ga0066709_1023939662	3300009137	Grasslands Soil	LDARSNLCYTQVNAEQDYNFDGDGRRAFHGSGGPCCAIMHLLQRAKSKSLSVRLLR*
Ga0066709_1042136141	3300009137	Grasslands Soil	MLNAVLDARSNLCYTQVNVEQDHSLSGDGCRAFYSSGGPRRAIMHPHQRAKSKG
Ga0066709_1046172291	3300009137	Grasslands Soil	MNAFLDAGSNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRAIVHPHQRSKSKGLSTK
Ga0134070_100440902	3300010301	Grasslands Soil	MVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134082_100483022	3300010303	Grasslands Soil	MVPDREQEQEHQRREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134067_103380461	3300010321	Grasslands Soil	LVLVIVIIVPDREQEHEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134084_100248832	3300010322	Grasslands Soil	MVPDREQEQEHESREALNAFLDAWSNLCYTQINVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134064_100872651	3300010325	Grasslands Soil	QEQEHESREALNAFLDAWSNLCYTQVNVEQDHSFDGDGCRAFYGSGGSRRAIVHPDQRTKSKSLSTKLLR*
Ga0134064_101496302	3300010325	Grasslands Soil	MVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEKYHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134111_100790521	3300010329	Grasslands Soil	MTKSRKALNGCLDARSNLCYTHINVEQEHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLP*
Ga0134111_100890601	3300010329	Grasslands Soil	MVPDREQEQEHESREALNAFLDASSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPYQRAKSKGLSTKLLR*
Ga0134080_101323522	3300010333	Grasslands Soil	VNAFLDARSNLCYTQINVEQDHSFDDHGRRAFHWSDESYRAIVHPLHGAKSKSLSV
Ga0134080_104396642	3300010333	Grasslands Soil	MTKSRKALNGCLDARSNLCYTHINVEQDHHFAGDGRCAFHGSGGSYRAIMHPFQRASSTSVQAGFLR*
Ga0137364_108004381	3300012198	Vadose Zone Soil	IDLAMRKVLMCVSAKSMNAFLDAGSNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRAIVHPHQRSKSKGLSAKLLR*
Ga0137364_109523862	3300012198	Vadose Zone Soil	MNGCLDARSNLCYTQINVEQDHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLP
Ga0137383_101208192	3300012199	Vadose Zone Soil	MNAFLDARSNLWYTQINVEQDHNFDGNGCRAFHDSGGSRRAIVHPPQRAKSKSLSIKLLR
Ga0137382_102569802	3300012200	Vadose Zone Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYGSGGPRRAIVHPHQRAKSKGLSTKLLR*
Ga0137382_104438862	3300012200	Vadose Zone Soil	LCYTEINVEQDHHFDGDGRRAFYGSGGRRRPIVHPQQRAKSKGLSARLLR*
Ga0137382_112181561	3300012200	Vadose Zone Soil	KVLMCVSAKSMNAFLDAGSNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRAIVHPHQRSKSKGLSAKLLR*
Ga0137365_102977612	3300012201	Vadose Zone Soil	MNAFLDTRSNLCYTQINVEQDHNLSGDGCRAFYRSGGPRRAIVHPYQRAKSKGLSTKLLR
Ga0137365_106960562	3300012201	Vadose Zone Soil	SNLCYTQVNVEQDYNLDGDGCRAFYGAGESRRAIMHPFQCAKSESLSVKLLR*
Ga0137365_111319972	3300012201	Vadose Zone Soil	MLNAVLDARSNLCYTQVNVEQDYNLDGDGRCTFYGSGGSRRAIMHPYQRAKSKGLSTKLLR*
Ga0137363_100145221	3300012202	Vadose Zone Soil	MNGCLDARSNLCYTHINVEQDHHFAGDGRRAFHGSGGPYRAIMHALQRARAKNLSTRVLR
Ga0137374_101280453	3300012204	Vadose Zone Soil	MNAFLDARSNLCYTQINVEQDHTFDGDGRRAFYGSGGSRRAIVHPLQRAKSKSLSGKLLR
Ga0137362_101030641	3300012205	Vadose Zone Soil	MSMLNACLDARSNLCYTQINVEQDHHFVGDGRCAFHGSGGSYRAIVHPLQRARAKNLSTR
Ga0137362_101247933	3300012205	Vadose Zone Soil	MNAFLDSRSNLCYTQVNVEQDHSVDGDGCGAFHGAGESRREVVHPFQCAKSKSLSVKLLR
Ga0137362_113472301	3300012205	Vadose Zone Soil	MKRNVEQDHSFDGDGRRAFLGSGWSHRAIVHPVQRAKSKSLSVKLLR*
Ga0137362_114301331	3300012205	Vadose Zone Soil	MTKSRKALNGFLDARSNLCYTEINVEQDHHFAGDGCCAFHGSGGCRREVVHPFQRAKSKS
Ga0137362_115857651	3300012205	Vadose Zone Soil	MSMLNAFLDARSNLCYTQINVEQDHHFARDGRCPFHGSGGSYRAIMHPLQRTGAKSLSTRVLR*
Ga0137380_105868982	3300012206	Vadose Zone Soil	MNALLDARSNLCYTQINAEQDHNLSGDGCRAFYSSGGSRRAIVRPHQRA
Ga0137380_107998742	3300012206	Vadose Zone Soil	MNAFLDARSNLCYTQINVEQDHNLSGDGCRAFYGSGGSRRAIVHPLQRAKSKGLSTKLLR
Ga0137381_100575393	3300012207	Vadose Zone Soil	MNALLDARSNLCYTQINVEQDHSFADDGCRAFYGSGGPRRAIVHPHQRAKSKSLSAKLLR
Ga0137381_115311771	3300012207	Vadose Zone Soil	VNAFLDARSNLCYTQVNVEQGHTFNGDGYRPAGGSDRVRRAIMHPLERAGSKSLSVKLLR
Ga0137381_115696302	3300012207	Vadose Zone Soil	MNAFLDARSKLCYTEINVEQDHNFDGDGCRAFYGSGGPRRAIVYPFQRAKSKSLSVKLLR
Ga0137376_100233901	3300012208	Vadose Zone Soil	LCYTNFDAEQDHDFSGDGCRADGGSHGVRRAIVHPGQRAKSEGLSAAVLWQYDVL
Ga0137379_112140992	3300012209	Vadose Zone Soil	MRSSANSMNAFLDARSNLCYTQINVEQDHNLSGDGCRAFYRSGGPRRAIVHPHQRAKSKGLSTKLLR*
Ga0137378_100486962	3300012210	Vadose Zone Soil	VLYEINVEQDPNFDGNGRRAFHGSGESHRAIVHPLQRAKSKSLSVKLLR*
Ga0137378_108596111	3300012210	Vadose Zone Soil	MNAFLDSRSNLCYTQVNVGQDHNFDGDGRRAFYGSGGSRRAIVHPHQRAKSKGL
Ga0137378_111208402	3300012210	Vadose Zone Soil	MRSSANSMNAFLDARSNLCYTQINVEQEHNLSGDGCGTFHCSGGPRRAIVHPHQRAKSKGLSTKL
Ga0137378_114329561	3300012210	Vadose Zone Soil	VEQDHSVDGDGCGALYGAGESRRAIMHPFQCAKSESLSVKLLR*
Ga0137377_109638702	3300012211	Vadose Zone Soil	MNAFLDSRSNLCYTQINVEQDHNFDGDGCRAFYGSGGSRRAIVHPYQRAKSKGLSTKLLR
Ga0137370_109962501	3300012285	Vadose Zone Soil	MNAFLDAGSNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRAIVHPHQRSKSKGLSAKLLR
Ga0137387_102187991	3300012349	Vadose Zone Soil	MNAFLDARSNLWYTQINVEQDHNFDGNGCRAFYGSGGPRRAIVHPHQRAKSKSLSAKLLR
Ga0137387_111233291	3300012349	Vadose Zone Soil	VKSSYIDLAMRKVLMCVSAKSMNAFLDAGSNLCYTQVNGEQAHSFDGDGRCAFYGSGGSRRAIVYPLERAKSKSLSTKLLR*
Ga0137372_100772382	3300012350	Vadose Zone Soil	MNALLDARSNLCYTQINVEQDHNFDGDGYRAFYGSGGSCREIMHLHQRAKSKSLSARFLR
Ga0137372_101164083	3300012350	Vadose Zone Soil	MSRSRKALNAFLDARSNLCYTQVNVEQDHSFAGDGCRALYGPGGSRRAIMHPFQRAKSKGLSVKLLR*
Ga0137386_103361551	3300012351	Vadose Zone Soil	MNAFLDARSKLCYTEINVEQDDNFDGDGHRAFHGSGRSCRAIVHPFQRAKSKSLSVKLLR
Ga0137367_104774172	3300012353	Vadose Zone Soil	MNAFLDARSKLCYTEINVEQDHNFDRNGYRAFHGSGGSRRAIVHPPQRAKSKSLSVKLLR
Ga0137367_106404222	3300012353	Vadose Zone Soil	MNAFLDARSNLWYTQINVEQDHNFDGDGCRAFHGSGGSRRAIVHPPQRAKSKSLSVKLLR
Ga0137366_103841812	3300012354	Vadose Zone Soil	MNAFLDARSNLCYTQINVEQDHNLSGDGCRAFYGSGGLRRAIVHPCQRAKSKGLSTKLLR
Ga0137366_107151042	3300012354	Vadose Zone Soil	LCYTQVNAEQDHNLDGNGRRAFYGSGWARRAIVHPHQRAKSK
Ga0137366_108920772	3300012354	Vadose Zone Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFCSSGGPRRAIMHPYQRAKSKGLSTKLLR*
Ga0137371_105747391	3300012356	Vadose Zone Soil	MTKSRKALNGCLDARSNLCYTHINVEQEHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLR*
Ga0137371_106439843	3300012356	Vadose Zone Soil	MNTFLDARSNLCYTQVDVEQDHNFDGDGRRAFCGSGGFHRAIMHAHQPVGAKSLSRSVLR
Ga0137371_112370031	3300012356	Vadose Zone Soil	DAWSNVCYTHISVEQDRTFDSDGRRAFHGSGGSHCAIVHSFQLTGAKSLSVKLLR*
Ga0137384_100959011	3300012357	Vadose Zone Soil	MVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHNFDGDGCRAFHGSGGSRAIVHPLQRAKSKGLSTKLLR
Ga0137384_110115571	3300012357	Vadose Zone Soil	TRRKSLLRSRKALNTFLDARSNLCYTQVNVEQDHSFAGDGCRALYGPGGSRRAIMHPFQRAKSKGLSVKLLR*
Ga0137368_1000242914	3300012358	Vadose Zone Soil	MNMKMTRSTKALNALLDVWSNLCYTDGNVEQDHSFDGDGHHAFHGTGGRCRAIVHSPYHARSEGLSVRLLR*
Ga0137375_101705992	3300012360	Vadose Zone Soil	MNAFLDARSKLCYTEINVEQDHSFDGDDRRAFHGSGRSCREIMHLHQRAKSKSLSVKLLR
Ga0137375_105523873	3300012360	Vadose Zone Soil	LNAFLDARSNLCYTQINVEQDHTFDGDGYRAFYGSGGSRRAIVHPDQRAKPKGLSTKLLR
Ga0137375_114004362	3300012360	Vadose Zone Soil	MNALLDVRSNLCYTEGNVEQDHNLDGNGRGAFHGSRRRCRAIVHPLQRAKSKSLSVKLLR
Ga0137361_116051612	3300012362	Vadose Zone Soil	MNAFLDAGSNLCYTQTNGEQAYSFDGDGRCAFYGSGGSRRPIVHPHQRAKSKSLSTKLLR
Ga0137373_101777912	3300012532	Vadose Zone Soil	MNAFLDARSKLCYTEINVEQDHSFDGDGRRAFYGSSGSRRAIVHPDQRARSKSLSVKLLR
Ga0137373_111537311	3300012532	Vadose Zone Soil	MNAFLDARSNLCYTQINVEQDHTFDGDGYRAFYGSGGSRRAIVHPDQRAKPKGLSTKLLR
Ga0137359_100777743	3300012923	Vadose Zone Soil	MNPFLDARSNLCYTQINVEQDHNLDGDGCCALYESGGSRAAIMHSLQCAGSGSM*
Ga0137407_101887561	3300012930	Vadose Zone Soil	ALNAFLDARSNLCYTQVNAEQDHNFDGDGRRAFHGSGGPCRAIVHPLQRSK*
Ga0137407_110597442	3300012930	Vadose Zone Soil	LCYTQVNVEQDDNFDGDGCRAFYGASRSRRAILHPLQRAKSKSLSVKLLL*
Ga0137407_121555602	3300012930	Vadose Zone Soil	LCYTQTNVEQDHTLDGDGRRAFYGSGGRRRPIVHPQQRAKSKGLSARLLR*
Ga0134081_101250352	3300014150	Grasslands Soil	LDARSNLCYTQINVEQDHNLSGDGCGTFHCSGGPRRAIVHPHQRAKSKGLSTKLLR*
Ga0134078_102001971	3300014157	Grasslands Soil	MNAFLDARSNLCYTQINVEQDHNFDGDGCRAFYGSGGSRRAIVHPHQRAKSKGLSNKVLR
Ga0134079_107335341	3300014166	Grasslands Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYSSGGPRRAIMHPYQHAKSKGLSTKLLR*
Ga0134073_101753202	3300015356	Grasslands Soil	MCYTQVNVEQDHNFDRDGCRAFHGSGGSRRAIVHPYQRAKSKGLSTKLLR*
Ga0134089_103721681	3300015358	Grasslands Soil	MNTFLDARSNLCYTQVDVEQDHNFDGDGRRAFCGSGGSRRAIMHPFQRAKSKSLSTKLLR
Ga0134085_100719652	3300015359	Grasslands Soil	MVPDREQEQEHESREALNAFLDAWSNLCYTQINVEQDHSLSGDGYRAFYSSGEPRRAIMHPHQRAKSKGLSTKLLR*
Ga0134069_11417102	3300017654	Grasslands Soil	MTKSRKALNGCLDARSNLCYTYINVEQDHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLR
Ga0134074_10763942	3300017657	Grasslands Soil	MLNAVLDARSNLCYTQVNAEQDHNFDGDGRRAFHSSGGCRRKVVHPHQRA
Ga0184618_104239411	3300018071	Groundwater Sediment	MRLGQRTLQQKRRSSSMTNSRKGLNSCLDARSNLCYTQINVEQDHHFAGDDRCAFHGSGGSSRAIMHALQRARAKNLSTRVLR
Ga0184618_104363562	3300018071	Groundwater Sediment	VWSNSCYTEINVEQDDNFDGDGRRAFYGSGGSRRAIVHPDQRAKSKGLSTKLLR
Ga0137408_12637442	3300019789	Vadose Zone Soil	DVRSNLCYTQINVEQDHNFDGDSYRAFYGSGGSCREIVHPHQRAKSKGLSTKLLR
Ga0193756_10600241	3300019866	Soil	VLYEINVEQDHNFDGNGRRAFYGSGGSRRAIVHPLQRAKSKSLSIKLLR
Ga0193707_100015418	3300019881	Soil	MTNSRKGLNSCLDARSNLCYTQINVEQDHHFAGDGRGAFHGSGGSYRAIMHPLQRARAKSLSTRVLR
Ga0193707_10095973	3300019881	Soil	VLYEINVEQDHNFDGNGRRAFYGSGGSRRAIMHPLQRAKSKSLSVKMLR
Ga0193707_10628962	3300019881	Soil	MSMLNAFLDARSNLCYTQINVEQDHHFDRNGGRAFHGSGGSYRAIMHPLQRARAKSLSTRVLR
Ga0193707_11894222	3300019881	Soil	MAKPGHYPLNAFLDARSNLCYTQIDVEQDDNFNGNGRRAFHGSDGSRRAIVHPLQRAKSKSLSVKLLR
Ga0193727_11144412	3300019886	Soil	MNAFLDARSNSCYTEVNVEQDHNFDGDGRRASYGSGGPRRAIVHPHQRAKSKGLSTNLLR
Ga0193729_10193371	3300019887	Soil	MCYTEINVEQDHNFDGDGCRAFYGSGGSRRAIVHPLQRAKSKSLSIK
Ga0193728_10461362	3300019890	Soil	MCYTQINVEQDHNFDGDGCRAFYGSGGSRRAIVHPLQRIKSKSLSVKLLR
Ga0193731_10352372	3300020001	Soil	MSMLNAFLDARSNLCYTQINVEQDHHFDRNGGRAFHGSGGSYRAIMHPLQRARAKSLSTR
Ga0193735_10210792	3300020006	Soil	MNAFLDARSNLCYTQINVEQDHHFAGDGRCAFHGSGGSYRAIMHPLQRARAKSLSTRVLR
Ga0193735_10916852	3300020006	Soil	LCYTQINVEQDHHFDGDGCRAFYGSGGRRRAIVHPHQRAKSKGLSTKLLR
Ga0193735_11263062	3300020006	Soil	MTNSRKGLNSCLDARSNLCYTQINVEQDHHFAGDGRGAFHGSGGSYRAIMHPLQRARAK
Ga0193721_10007861	3300020018	Soil	MQPKIGASDVMNSCLDARSNLCYTHINVEQDHHFAGGGRCAFHGSGGFYRAIMHALQRARAKNVSTRLLR
Ga0179596_101320282	3300021086	Vadose Zone Soil	MNAFLDARSNLCYTQTNVEQDHTFDGDGRRAFYGSGWSRRAIVYPLERAKSKSLSTKLLR
Ga0224452_10511982	3300022534	Groundwater Sediment	LCYTQINVEQDHNFDGDGYRAFYGSGGPRRAIVHPDQRSKSKGLSTKLLR
Ga0222622_109091441	3300022756	Groundwater Sediment	MNAFLDARSNLCYTQINVEQDHHLAGNGRCAFHGSGGSYRAIMH
Ga0209055_10633912	3300026309	Soil	MSKSRKALNAFLDARSNLCYTQGNVEQDHNFDGDGCRAFHGSGGSRRAIMHPLQRAKSRSLSVKLLR
Ga0209155_10583002	3300026316	Soil	MLNAVLDARSNLCYTQVNVEQDHNLDGDGRCAFYSSGGPRRAIMHPYQRAKSKGLSTKLL
Ga0209470_10312603	3300026324	Soil	MNAFLDARSNLCYTQVNAEQDHSFDGDGRRRFHGSGGSRHAIVHPL
Ga0209470_10386332	3300026324	Soil	MTKSRKALNGCLDARSNLCYTHINVEQDHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLP
Ga0209473_11893912	3300026330	Soil	DVRYNSWYTKINVEQDHSFDGHGRRASYGSGGSRCAIVHPLQRAKSKGLSVKLLR
Ga0209803_11318281	3300026332	Soil	EQDHNFDGDGRRAFHGSGRSRRAIMHPLEHGKSKSLSVKLLR
Ga0209377_11673521	3300026334	Soil	PDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR
Ga0209159_10049966	3300026343	Soil	MNAFLDARSNLCYTQINVEQDHNFDRNSGRALHGSGSSQRAIVHPLQRAGAKSL
Ga0257163_10342772	3300026359	Soil	MNAFLDARSNLCYTQINVGQDHNFDGDGRRAFHGPGESHCAIVHPLQRAESKGLSVKLLR
Ga0209378_10500672	3300026528	Soil	VLVIVIMVPDREQEQEHESREALNAFLDAWSNLCYTQVNVEQDHSLSGDGYRAFYSSGGPRRAIMHPHQRAKSKGLSTKLLR
Ga0209807_12132121	3300026530	Soil	LCYTQINGEQDHNLDGDSRRAFYSSGRFRCAIVHPHQRGKSKGLSTKVLR
Ga0209157_10418913	3300026537	Soil	MTKSRKALNGCLDARSNLCYTHINVEQDHHFAGDGRCAFHGSGGSYRAIMHALQRARAKNLSTRVLR
Ga0209056_101377153	3300026538	Soil	ARSNLCYTQVNAEQDHNFDGDGRRAFHGSGGPCRAIVHPLQRTK
Ga0209056_101443521	3300026538	Soil	MNAFLDARSNLCYTQVNAEQDHNFHGDGRRAFHGSGGSCRAIMHPFQRAKSKSLSLKLLC
Ga0209577_100535263	3300026552	Soil	MSRSTSKSRKVLNAFLDARSNLCYTKINVEQDHSFDGHGRRAFHGSSGSRRAIVHPYQRAKSKGLSTKLLR
Ga0209488_105683431	3300027903	Vadose Zone Soil	MRKVLMCVSAKSMNAFLDARSNLCYTQTNVEQDHTFDGDGRRAFYGSGWSRRAIVHPHQRTKSKSLSTNLLR
Ga0310811_108742841	3300033475	Soil	LCYTQINVEQDHNFDGDGRRAFHGSGESHRAIVHPLQRAKSKSLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041123

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences